Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624128

Identifier: 167624128

GI number: 167624128

Start: 2667892

End: 2668584

Strand: Direct

Name: 167624128

Synonym: Shal_2204

Alternate gene names: NA

Gene position: 2667892-2668584 (Clockwise)

Preceding gene: 167624127

Following gene: 167624129

Centisome position: 51.04

GC content: 48.77

Gene sequence:

>693_bases
GTGAATGATTACAGCGTAATTGGCGCATTGCTCGTTGGATTGATGGGGGCGGGTCATTGTATTGGTATGTGTGGTGGCTT
AGTGGGGGCGCTGTCTGTAAACCTACCTAAGCAGCATGCTGGCAATAAGCTCGTATCGCAGTTGGGGTATCTCTTAAGTT
ACAACAGCGGCCGAATAATCAGTTACACGTTAGCAGGCGCATTTGTTGGTGCCAGCAGCAGTGCGCTGAGCGTATTGTTT
GATGTAGACACCTACTTGCTAGTGCTACGGCTGTTTGCCGGTTTTATGATGATTATTACCGGACTTTACATTGCGCAAAT
TTGGGCGGGTGTTGTCCAGATTGAACGCGTAGGTAAATGGCTTTGGCAGTTCATAGCCCCCATCGCAAATCGATTTATCC
CAATCAAAAATAAGGCCCATGCCTTTATCGCCGGTAGTCTTTGGGGATGGCTACCCTGTGGGCTCGTTTATAGCATGTTG
ACTTGGTCTGTTGCGGCAGGTAATGCCCTAGACGGTGCCTTGATTATGCTTGCGTTTGGCTTAGGCACATTACCGGCGCT
TTTGAGCGCAGGTATTGCCGCGAGTACATTTAGCCGCTGGGTACAAAACAAACTAGTACGAATTATAAGCGGAATAGCCT
TAGTGGCATTCGGAATACAGACCTTGTATGTGGCGATTGGCCAGCTTAGCTAG

Upstream 100 bases:

>100_bases
CAGAAAATACGACCGTTCCTGAGACCACTACAAATGCGACTGACACCAACAACACTGCCTCTGCTTTAGATAACTCAAAT
GATAAGAGATCAGTGTAAGA

Downstream 100 bases:

>100_bases
CTCCGAATATCAAATTAGTTTAACATAGTAGACGAATAGTCAAAATTGAGAGAGACAATGTCAGCTGATAACAATAAGAA
CCGCCGTCAAATGGCATCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MNDYSVIGALLVGLMGAGHCIGMCGGLVGALSVNLPKQHAGNKLVSQLGYLLSYNSGRIISYTLAGAFVGASSSALSVLF
DVDTYLLVLRLFAGFMMIITGLYIAQIWAGVVQIERVGKWLWQFIAPIANRFIPIKNKAHAFIAGSLWGWLPCGLVYSML
TWSVAAGNALDGALIMLAFGLGTLPALLSAGIAASTFSRWVQNKLVRIISGIALVAFGIQTLYVAIGQLS

Sequences:

>Translated_230_residues
MNDYSVIGALLVGLMGAGHCIGMCGGLVGALSVNLPKQHAGNKLVSQLGYLLSYNSGRIISYTLAGAFVGASSSALSVLF
DVDTYLLVLRLFAGFMMIITGLYIAQIWAGVVQIERVGKWLWQFIAPIANRFIPIKNKAHAFIAGSLWGWLPCGLVYSML
TWSVAAGNALDGALIMLAFGLGTLPALLSAGIAASTFSRWVQNKLVRIISGIALVAFGIQTLYVAIGQLS
>Mature_230_residues
MNDYSVIGALLVGLMGAGHCIGMCGGLVGALSVNLPKQHAGNKLVSQLGYLLSYNSGRIISYTLAGAFVGASSSALSVLF
DVDTYLLVLRLFAGFMMIITGLYIAQIWAGVVQIERVGKWLWQFIAPIANRFIPIKNKAHAFIAGSLWGWLPCGLVYSML
TWSVAAGNALDGALIMLAFGLGTLPALLSAGIAASTFSRWVQNKLVRIISGIALVAFGIQTLYVAIGQLS

Specific function: Unknown

COG id: COG2836

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24328; Mature: 24328

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDYSVIGALLVGLMGAGHCIGMCGGLVGALSVNLPKQHAGNKLVSQLGYLLSYNSGRII
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEE
SYTLAGAFVGASSSALSVLFDVDTYLLVLRLFAGFMMIITGLYIAQIWAGVVQIERVGKW
EEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWQFIAPIANRFIPIKNKAHAFIAGSLWGWLPCGLVYSMLTWSVAAGNALDGALIMLAFG
HHHHHHHHHHCEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LGTLPALLSAGIAASTFSRWVQNKLVRIISGIALVAFGIQTLYVAIGQLS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNDYSVIGALLVGLMGAGHCIGMCGGLVGALSVNLPKQHAGNKLVSQLGYLLSYNSGRII
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEE
SYTLAGAFVGASSSALSVLFDVDTYLLVLRLFAGFMMIITGLYIAQIWAGVVQIERVGKW
EEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWQFIAPIANRFIPIKNKAHAFIAGSLWGWLPCGLVYSMLTWSVAAGNALDGALIMLAFG
HHHHHHHHHHCEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LGTLPALLSAGIAASTFSRWVQNKLVRIISGIALVAFGIQTLYVAIGQLS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA