Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624111

Identifier: 167624111

GI number: 167624111

Start: 2646782

End: 2647279

Strand: Direct

Name: 167624111

Synonym: Shal_2187

Alternate gene names: NA

Gene position: 2646782-2647279 (Clockwise)

Preceding gene: 167624110

Following gene: 167624113

Centisome position: 50.64

GC content: 33.53

Gene sequence:

>498_bases
ATGAATATTAAATATTGGTTTCATGGCTCGTTACAAAAAATCGATACATTCGAGCCATTCTCCCACTTTGGCAGCCTTGA
GTCGGCTAAAGAACGGGTACAAAAGAAAAAGATTGAAGAAGATAAAAGTTCATCTCCCTCATTTATTCATAAGTGTTCAA
TTACTATTGACGAAAATGAAATTTTATTTTTAACCGAAGACTGGTTATCCAATAGAGCTCAATCATTAGCAAGGGCACTC
AAAGAAAATTTTCCCAGTGACTTAAAGTTCGTTGAAATATGGAAGGAACTCAGAGATTTACCAAGCTCTGGGATGGATAA
TAGAGAGAGAACGATAAAAGTAAATGAAATTGGCTATCCTAAACTGCTCGATGAATTAAGAATGAGAAATTTAAAAGCTG
TGTCTTACAAAAATGAAGTTGAGGATAAAGGGCATATTTCAATCGTAATAATTACACCAGATATAATTCATATCCAAGAA
GTAATTGAGCATACCTAA

Upstream 100 bases:

>100_bases
TGACATAGTAAAAATGAACGTGAGCAAGTTTATGCCGCACGTGAACACGAGCAAATAACAAACCAAGTCAACTAGGCGTT
AGGTATACATAGGGATATTC

Downstream 100 bases:

>100_bases
CAATCACATAAAAGGATAAAGGGCTCGGAGCGAATTTGAGATATTTCTTCTTATCTAAGCCACTTGTGGTAGACCAAATG
CTCTAACGTGTTTTTGTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MNIKYWFHGSLQKIDTFEPFSHFGSLESAKERVQKKKIEEDKSSSPSFIHKCSITIDENEILFLTEDWLSNRAQSLARAL
KENFPSDLKFVEIWKELRDLPSSGMDNRERTIKVNEIGYPKLLDELRMRNLKAVSYKNEVEDKGHISIVIITPDIIHIQE
VIEHT

Sequences:

>Translated_165_residues
MNIKYWFHGSLQKIDTFEPFSHFGSLESAKERVQKKKIEEDKSSSPSFIHKCSITIDENEILFLTEDWLSNRAQSLARAL
KENFPSDLKFVEIWKELRDLPSSGMDNRERTIKVNEIGYPKLLDELRMRNLKAVSYKNEVEDKGHISIVIITPDIIHIQE
VIEHT
>Mature_165_residues
MNIKYWFHGSLQKIDTFEPFSHFGSLESAKERVQKKKIEEDKSSSPSFIHKCSITIDENEILFLTEDWLSNRAQSLARAL
KENFPSDLKFVEIWKELRDLPSSGMDNRERTIKVNEIGYPKLLDELRMRNLKAVSYKNEVEDKGHISIVIITPDIIHIQE
VIEHT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19302; Mature: 19302

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKYWFHGSLQKIDTFEPFSHFGSLESAKERVQKKKIEEDKSSSPSFIHKCSITIDENE
CCEEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCC
ILFLTEDWLSNRAQSLARALKENFPSDLKFVEIWKELRDLPSSGMDNRERTIKVNEIGYP
EEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCH
KLLDELRMRNLKAVSYKNEVEDKGHISIVIITPDIIHIQEVIEHT
HHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHCC
>Mature Secondary Structure
MNIKYWFHGSLQKIDTFEPFSHFGSLESAKERVQKKKIEEDKSSSPSFIHKCSITIDENE
CCEEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCC
ILFLTEDWLSNRAQSLARALKENFPSDLKFVEIWKELRDLPSSGMDNRERTIKVNEIGYP
EEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCH
KLLDELRMRNLKAVSYKNEVEDKGHISIVIITPDIIHIQEVIEHT
HHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA