| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167624059
Identifier: 167624059
GI number: 167624059
Start: 2571519
End: 2571725
Strand: Reverse
Name: 167624059
Synonym: Shal_2135
Alternate gene names: NA
Gene position: 2571725-2571519 (Counterclockwise)
Preceding gene: 167624061
Following gene: 167624042
Centisome position: 49.2
GC content: 36.71
Gene sequence:
>207_bases ATGCCAAAAGATAAAAAACTTGTTAACTTTTCGGAAGACCACGAGCTAAATAACAGATTAAGACGCAATAACAAACGTCA AACTGAAGAGAATCGCCAAAAATTGAAAAACATTGGTGACAAAGCCAAAAAGCAATTAGACAAAACGCGACTGACGCATG AAGATCTAGACAAAGCTATTGAGCACAACAAAGAGAAGCTCGACTAA
Upstream 100 bases:
>100_bases ATATTCGGATAGGGACGTTCACATGAGGCTCTTATCACAATTCTAAAAGTGCAGTTAGTGGCATAATATTTACTCATCCA CTATATAGCGGAAATACAAA
Downstream 100 bases:
>100_bases TTTAAGGCCCCTTTTGTCGTCGATAAACATATTTATCGACGACAACAGATACACTTTCAGTGAGGCGCCACAAACATGAT GGCAGTATTTCACACTAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 68; Mature: 67
Protein sequence:
>68_residues MPKDKKLVNFSEDHELNNRLRRNNKRQTEENRQKLKNIGDKAKKQLDKTRLTHEDLDKAIEHNKEKLD
Sequences:
>Translated_68_residues MPKDKKLVNFSEDHELNNRLRRNNKRQTEENRQKLKNIGDKAKKQLDKTRLTHEDLDKAIEHNKEKLD >Mature_67_residues PKDKKLVNFSEDHELNNRLRRNNKRQTEENRQKLKNIGDKAKKQLDKTRLTHEDLDKAIEHNKEKLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8235; Mature: 8104
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKDKKLVNFSEDHELNNRLRRNNKRQTEENRQKLKNIGDKAKKQLDKTRLTHEDLDKAI CCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH EHNKEKLD HHHHHCCC >Mature Secondary Structure PKDKKLVNFSEDHELNNRLRRNNKRQTEENRQKLKNIGDKAKKQLDKTRLTHEDLDKAI CCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH EHNKEKLD HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA