| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167624019
Identifier: 167624019
GI number: 167624019
Start: 2521796
End: 2522899
Strand: Direct
Name: 167624019
Synonym: Shal_2095
Alternate gene names: NA
Gene position: 2521796-2522899 (Clockwise)
Preceding gene: 167624016
Following gene: 167624020
Centisome position: 48.25
GC content: 39.95
Gene sequence:
>1104_bases ATGGACGTAACTAAGAATCAATCACTTAATGACCATAGAGCACAGAAATTAAAGGATCGCCAAGCTCTTAGTTATCCTTT TACGCCTCCATTGTGTGATGCCAAGGTTGTTTATGTGGCTAAAGGCGTACTGTGGGCGCGGTTATCAATGCCAATGGGAC TCGACCATATAAATGTATACATTCTTGAAGATACTGATGGTTGGTATTTAGTCGATACAGGCTTAAACACTGAAGAAAAT AAAGCATTGTGGATAGCGCTTGCAGAAAACTACCTCACCGCTAAACCTGTTAAAGGCGTGATTTGTACCCATTTTCATTA TGACCACTCAGGTTTGTCGAGTTGGCTAACTGAGTATTTTGATGTGCCTTTGTATATGACTCACGGTGAGTACTATATGT TGAGAGGTGTTGCAGCTACTCATGAATGTAGCGGCAATGAACAAGACAAGCGGTTTTATACAAGGTCTGGATTCTCAGCT GGGTATGCTGAAAAGGTTTTTGAAGCTTGTAAGAAGGATCCCTATATAACTCATTACCCGCCACATTTTTTCCGCCTAAG GGAGGGAGATGTTTTTACGATTGGACAGCGAAAGTGGCAGGTTTGGATCGGTGAAGGCCATAGTCCTGAACATGCTTGTT TATATAGTGAAGCAATGGAAGACGAGCCTGCACTATTAATTTCAGGTGACCAAGTTCTCCCTGAAATCAGCTCAAATATT TTAGTTAGTAGTATTGAACCGGAAGGCAATCCGTTAGCTCAATGGTTTAAGTCGTTAAAGCGGCTTGAGTCATTAGATAG TGAATCATTGGTATTACCAGCACACGGCCCTGTTTTTGGTAACTTACACATTAGATCAAAGCAATTGGAACAACATCATA AAAACCAGCTTGATGTGTTACGTGAGTTAAGCGTTAGTTATATTGATTTTACCGCATTGGATGCATTAGAAGTGTTATTT AAACGACCTATGCAGCCAATCGAAAAATTAATGGCGCTGGGGGAAACTCTTGCTCACTTAAACTGGTTAATAAACGTAGA AGAGTTAACGAGAACCCTTTGCAATAAAAGCGATAAATTTATATATAACAATAAGCTGAAATAG
Upstream 100 bases:
>100_bases TGTTGTTTAGTCGTGTAATAGATTCTTATATTTGTGTCATTAATAGCTGGCTTTATCATGGTGCTTAATCATGTAACTTT TAATTCAGGTGGGAGGGGCA
Downstream 100 bases:
>100_bases CTTAGGGATTATAGTTAACGAGAAAAGGATAACAGGAGAAAGTTATGGATATTATGGATCATGCGCAAGAGGTAAAAGCA CAACTGACAGCCGTAGGAGC
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: Metallo-Beta-Lactamase Family Protein; Beta-Lactamase Domain Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Metallo-Beta-Lactamase Superfamily; Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Domain Protein; Zinc Metallohydrolase; Metallo-Beta-Lactamase; Hydrolase; Beta-Lactamase Class B; Metallo-Hydrolase/Oxidoreductase Superfamily Protein; Zn-Dependent Hydrolase Including Glyoxylase-Like Protein; Zinc Metallohydrolase Glyoxalase II Family; Metallo-Dependent Enzymatic Protein
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MDVTKNQSLNDHRAQKLKDRQALSYPFTPPLCDAKVVYVAKGVLWARLSMPMGLDHINVYILEDTDGWYLVDTGLNTEEN KALWIALAENYLTAKPVKGVICTHFHYDHSGLSSWLTEYFDVPLYMTHGEYYMLRGVAATHECSGNEQDKRFYTRSGFSA GYAEKVFEACKKDPYITHYPPHFFRLREGDVFTIGQRKWQVWIGEGHSPEHACLYSEAMEDEPALLISGDQVLPEISSNI LVSSIEPEGNPLAQWFKSLKRLESLDSESLVLPAHGPVFGNLHIRSKQLEQHHKNQLDVLRELSVSYIDFTALDALEVLF KRPMQPIEKLMALGETLAHLNWLINVEELTRTLCNKSDKFIYNNKLK
Sequences:
>Translated_367_residues MDVTKNQSLNDHRAQKLKDRQALSYPFTPPLCDAKVVYVAKGVLWARLSMPMGLDHINVYILEDTDGWYLVDTGLNTEEN KALWIALAENYLTAKPVKGVICTHFHYDHSGLSSWLTEYFDVPLYMTHGEYYMLRGVAATHECSGNEQDKRFYTRSGFSA GYAEKVFEACKKDPYITHYPPHFFRLREGDVFTIGQRKWQVWIGEGHSPEHACLYSEAMEDEPALLISGDQVLPEISSNI LVSSIEPEGNPLAQWFKSLKRLESLDSESLVLPAHGPVFGNLHIRSKQLEQHHKNQLDVLRELSVSYIDFTALDALEVLF KRPMQPIEKLMALGETLAHLNWLINVEELTRTLCNKSDKFIYNNKLK >Mature_367_residues MDVTKNQSLNDHRAQKLKDRQALSYPFTPPLCDAKVVYVAKGVLWARLSMPMGLDHINVYILEDTDGWYLVDTGLNTEEN KALWIALAENYLTAKPVKGVICTHFHYDHSGLSSWLTEYFDVPLYMTHGEYYMLRGVAATHECSGNEQDKRFYTRSGFSA GYAEKVFEACKKDPYITHYPPHFFRLREGDVFTIGQRKWQVWIGEGHSPEHACLYSEAMEDEPALLISGDQVLPEISSNI LVSSIEPEGNPLAQWFKSLKRLESLDSESLVLPAHGPVFGNLHIRSKQLEQHHKNQLDVLRELSVSYIDFTALDALEVLF KRPMQPIEKLMALGETLAHLNWLINVEELTRTLCNKSDKFIYNNKLK
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42036; Mature: 42036
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVTKNQSLNDHRAQKLKDRQALSYPFTPPLCDAKVVYVAKGVLWARLSMPMGLDHINVY CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCEEEEE ILEDTDGWYLVDTGLNTEENKALWIALAENYLTAKPVKGVICTHFHYDHSGLSSWLTEYF EEECCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHHH DVPLYMTHGEYYMLRGVAATHECSGNEQDKRFYTRSGFSAGYAEKVFEACKKDPYITHYP CCCEEEECCCEEEEECCEECCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCEECCC PHFFRLREGDVFTIGQRKWQVWIGEGHSPEHACLYSEAMEDEPALLISGDQVLPEISSNI CHHEEECCCCEEEECCEEEEEEEECCCCCCHHHHHHHHCCCCCEEEEECCHHHHHHCCCE LVSSIEPEGNPLAQWFKSLKRLESLDSESLVLPAHGPVFGNLHIRSKQLEQHHKNQLDVL EEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECHHHHHHHHHHHHHHH RELSVSYIDFTALDALEVLFKRPMQPIEKLMALGETLAHLNWLINVEELTRTLCNKSDKF HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCE IYNNKLK EECCCCC >Mature Secondary Structure MDVTKNQSLNDHRAQKLKDRQALSYPFTPPLCDAKVVYVAKGVLWARLSMPMGLDHINVY CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCEEEEE ILEDTDGWYLVDTGLNTEENKALWIALAENYLTAKPVKGVICTHFHYDHSGLSSWLTEYF EEECCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHHH DVPLYMTHGEYYMLRGVAATHECSGNEQDKRFYTRSGFSAGYAEKVFEACKKDPYITHYP CCCEEEECCCEEEEECCEECCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCEECCC PHFFRLREGDVFTIGQRKWQVWIGEGHSPEHACLYSEAMEDEPALLISGDQVLPEISSNI CHHEEECCCCEEEECCEEEEEEEECCCCCCHHHHHHHHCCCCCEEEEECCHHHHHHCCCE LVSSIEPEGNPLAQWFKSLKRLESLDSESLVLPAHGPVFGNLHIRSKQLEQHHKNQLDVL EEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECHHHHHHHHHHHHHHH RELSVSYIDFTALDALEVLFKRPMQPIEKLMALGETLAHLNWLINVEELTRTLCNKSDKF HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCE IYNNKLK EECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA