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The map label for this gene is yciM [H]

Identifier: 167623974

GI number: 167623974

Start: 2470731

End: 2471891

Strand: Direct

Name: yciM [H]

Synonym: Shal_2048

Alternate gene names: 167623974

Gene position: 2470731-2471891 (Clockwise)

Preceding gene: 167623973

Following gene: 167623975

Centisome position: 47.27

GC content: 42.98

Gene sequence:

>1161_bases
ATGTTAGAAATCCTCTTTCTGCTTCTTCCAATAGCAGCCGGTTATGGCTGGTATATGGGACGCAGAAGTGTCAGGCAGAA
ACAGACAAATCAAAGAAAGCAGCTAAGCCGTGATTATTTCACAGGGCTTAACTTTCTGCTGTCGAATGAATCAGATAAAG
CCGTTGACCTGTTTATCAGTATGTTAGATGTCGACGATGATACTATTGATACCCATCTTTCGTTAGGTTCACTATTTCGT
AAACGCGGCGAAGTTGACCGCTCTATTCGTATTCACCAAAACCTCATTGCAAGGCCAAGCTTAACCACTGAGCAACGAGA
TTTGGCAATGATGGAGTTGGGTAAAGACTATTTAGCTGCCGGTTTTTACGACAGAGCAGAAGAGATTTTTATTAATCTTG
TTAATCAAGATGATCACAGTGAAGAAGCTGAAACTCAACTCATCGCAATCTACCAAGTGACTAAAGATTGGCAAAAAGCG
ATCGACATTATCAAAAAGTTGAAGCGTAAACGCCAACAAGAACTCAAACATGATACTGCGCACTTTTACTGTGAATTAGC
CGATGAAACTGAAGATGAGACATTAAAACTTAAGAACCTGCAGCTGGCGATTAAGCAAGATAGTCAATGTCCGCGCGCCT
TACTCGCGCTTGCGGAGCAGTATTTAAGGCAAGAAGAGTTTAAGGCTTGCAAGCAAGCGATAGAAAAGCTGCTTACCACT
GATATTGACTTTTTGCCCGATGCTTTAGCAATAGCAAAACAAGCTTATCTAATTACCAATGACAGTACCGGCTATCAGGA
GCTTCTTCGGGAAGCGATAGAGAATGGGGCTGGTGCCAGTATTACCATCACCCTTGCTCAGCACATGATTGAGCAAGGAC
ACCCTAAAGATGCAGAAAAGTTGATCATGGAAGGCCTAATTAGGCACCCCACGATGAAAAGCTTCCAGCACCTTATGAAA
ATGCATTTACTACAAGCTGAAGAAGGACAAGCCAAGCAGAGTTTAACAATGCTTGAACAGCTAGTAGAACAACAGATCAA
ATATAGACCTGGGTATCGCTGCAGAGAATGTGGCTTCCCATCCCATAGGCTATATTGGCATTGTCCCTCATGTAAGCATT
GGGGCAGCATCAAAAGGATCAGAGGTCTAGACGGTGAGTAA

Upstream 100 bases:

>100_bases
AATAAGAAATTATTAAACGCAGAAGACAAGCAAATAACTGAATCCGAATCGAAAACTCTAGTCGTTAAACAAAGCACAGA
AAAAGAAGTAGACGCTTAAT

Downstream 100 bases:

>100_bases
CCGTTAGCGCCCCTGGTTTATCAATAAAAACTGTAAAACCTACACCGCAAAGCGATTGGAGAAAGAATGACTGACAAGCC
TATTTTAGTTGCCCTAGACT

Product: tetratricopeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MLEILFLLLPIAAGYGWYMGRRSVRQKQTNQRKQLSRDYFTGLNFLLSNESDKAVDLFISMLDVDDDTIDTHLSLGSLFR
KRGEVDRSIRIHQNLIARPSLTTEQRDLAMMELGKDYLAAGFYDRAEEIFINLVNQDDHSEEAETQLIAIYQVTKDWQKA
IDIIKKLKRKRQQELKHDTAHFYCELADETEDETLKLKNLQLAIKQDSQCPRALLALAEQYLRQEEFKACKQAIEKLLTT
DIDFLPDALAIAKQAYLITNDSTGYQELLREAIENGAGASITITLAQHMIEQGHPKDAEKLIMEGLIRHPTMKSFQHLMK
MHLLQAEEGQAKQSLTMLEQLVEQQIKYRPGYRCRECGFPSHRLYWHCPSCKHWGSIKRIRGLDGE

Sequences:

>Translated_386_residues
MLEILFLLLPIAAGYGWYMGRRSVRQKQTNQRKQLSRDYFTGLNFLLSNESDKAVDLFISMLDVDDDTIDTHLSLGSLFR
KRGEVDRSIRIHQNLIARPSLTTEQRDLAMMELGKDYLAAGFYDRAEEIFINLVNQDDHSEEAETQLIAIYQVTKDWQKA
IDIIKKLKRKRQQELKHDTAHFYCELADETEDETLKLKNLQLAIKQDSQCPRALLALAEQYLRQEEFKACKQAIEKLLTT
DIDFLPDALAIAKQAYLITNDSTGYQELLREAIENGAGASITITLAQHMIEQGHPKDAEKLIMEGLIRHPTMKSFQHLMK
MHLLQAEEGQAKQSLTMLEQLVEQQIKYRPGYRCRECGFPSHRLYWHCPSCKHWGSIKRIRGLDGE
>Mature_386_residues
MLEILFLLLPIAAGYGWYMGRRSVRQKQTNQRKQLSRDYFTGLNFLLSNESDKAVDLFISMLDVDDDTIDTHLSLGSLFR
KRGEVDRSIRIHQNLIARPSLTTEQRDLAMMELGKDYLAAGFYDRAEEIFINLVNQDDHSEEAETQLIAIYQVTKDWQKA
IDIIKKLKRKRQQELKHDTAHFYCELADETEDETLKLKNLQLAIKQDSQCPRALLALAEQYLRQEEFKACKQAIEKLLTT
DIDFLPDALAIAKQAYLITNDSTGYQELLREAIENGAGASITITLAQHMIEQGHPKDAEKLIMEGLIRHPTMKSFQHLMK
MHLLQAEEGQAKQSLTMLEQLVEQQIKYRPGYRCRECGFPSHRLYWHCPSCKHWGSIKRIRGLDGE

Specific function: Unknown

COG id: COG2956

COG function: function code G; Predicted N-acetylglucosaminyl transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI2367116, Length=379, Percent_Identity=43.0079155672823, Blast_Score=341, Evalue=5e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44645; Mature: 44645

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEILFLLLPIAAGYGWYMGRRSVRQKQTNQRKQLSRDYFTGLNFLLSNESDKAVDLFIS
CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
MLDVDDDTIDTHLSLGSLFRKRGEVDRSIRIHQNLIARPSLTTEQRDLAMMELGKDYLAA
HHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHH
GFYDRAEEIFINLVNQDDHSEEAETQLIAIYQVTKDWQKAIDIIKKLKRKRQQELKHDTA
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFYCELADETEDETLKLKNLQLAIKQDSQCPRALLALAEQYLRQEEFKACKQAIEKLLTT
HEEEEECCCCCCHHEEHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIDFLPDALAIAKQAYLITNDSTGYQELLREAIENGAGASITITLAQHMIEQGHPKDAEK
CHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCHHHH
LIMEGLIRHPTMKSFQHLMKMHLLQAEEGQAKQSLTMLEQLVEQQIKYRPGYRCRECGFP
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC
SHRLYWHCPSCKHWGSIKRIRGLDGE
CCCEEEECCCCCCCCCHHHHCCCCCC
>Mature Secondary Structure
MLEILFLLLPIAAGYGWYMGRRSVRQKQTNQRKQLSRDYFTGLNFLLSNESDKAVDLFIS
CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
MLDVDDDTIDTHLSLGSLFRKRGEVDRSIRIHQNLIARPSLTTEQRDLAMMELGKDYLAA
HHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHH
GFYDRAEEIFINLVNQDDHSEEAETQLIAIYQVTKDWQKAIDIIKKLKRKRQQELKHDTA
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFYCELADETEDETLKLKNLQLAIKQDSQCPRALLALAEQYLRQEEFKACKQAIEKLLTT
HEEEEECCCCCCHHEEHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIDFLPDALAIAKQAYLITNDSTGYQELLREAIENGAGASITITLAQHMIEQGHPKDAEK
CHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCHHHH
LIMEGLIRHPTMKSFQHLMKMHLLQAEEGQAKQSLTMLEQLVEQQIKYRPGYRCRECGFP
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC
SHRLYWHCPSCKHWGSIKRIRGLDGE
CCCEEEECCCCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]