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The map label for this gene is ybiT [H]

Identifier: 167623932

GI number: 167623932

Start: 2419642

End: 2421252

Strand: Reverse

Name: ybiT [H]

Synonym: Shal_2006

Alternate gene names: 167623932

Gene position: 2421252-2419642 (Counterclockwise)

Preceding gene: 167623933

Following gene: 167623928

Centisome position: 46.32

GC content: 45.44

Gene sequence:

>1611_bases
TTGATCTCTACCGCAAACATCACGATGCAGTTTGGCCCAGAGCCATTATTCGAAAACATTTCCGCTAAGTTCGGTAACGG
CAATCGCTACGGCTTAATCGGCGCAAATGGTTGTGGTAAATCCACCTTCATGAAGATCCTCAGTGGCGAGCTTGCGCCAA
CCTCGGGTAACGTCTCAATTACTCCGGGTCAAAAAGTCGGTACCTTGAGCCAGAACCAATTCGCATTTGAAGAATACAGC
GTTATCGACGCGGTAATTCAAGGCGACGCCAAACTGTGGGAAATCAAGCAAGAACGTGAGCGCATCTATTCACTGCCAGA
AATGAGTGAAGAAGATGGTATGAAAGTGGGCGAGCTTGAAAGTGAGTTTGCTGAAATGGACGGTTACAGCGCTGAAAGCC
GTGCCGGTGAAATCCTACTTGAAGCGGGTATCGAAGAAGAGTTTCATTTCGGCCTAATGAGCCAAGTTGCGCCAGGTTTT
AAATTGCGCGTGCTATTAGCACAGGCATTGTTCTCAAACCCAGATATTTTGCTTCTGGATGAACCAACCAACAACTTGGA
TATTCACACCATTAACTGGTTGGCTGAAGAACTTAATAAGCGTAAGTGCACCATGATCATCATTTCGCACGACAGACACT
TCTTGAACACTGTTTGTACCCATATGGCCGATATCGATTACGGCGAGCTACGTATTTACCCAGGTAACTACGAGTACTTC
ATGGAAGCGTCTTCACTTATTCAAGAGCAATTGTTAGCCGGTAACGCCAAGAAAAGTGCTGAAATGACTGAGTTACAAGA
CTTCGTTAACCGTTTCGGTGCTAACGCGTCTAAAGCGAAACAAGCAAGCTCTCGTGCTAAGAAGCTTGAAAAAATCAGCC
TAGATGAAGTTAAATCTTCAAGCCGTATGACACCATCACTGCGTTTTGATGATGGTAAGAAGATGCACCGCCAGGCGCTT
ATTCTTGAAAACGTTGGCCACGGTTTTGACGGCGAAATCCTATTTGAAGGCGGCGAGTTAATCCTTGAAGCTGGCGCTAA
GCTTGCGGTTATCGGTGAGAACGGCGTGGGTAAATCAACCTTCTTACGTTGTTTAGTGAATGAATTACAAAACAACGATG
GCGTAATCAAGTGGTCTGAGAATGCCTCTATCGGCTATTGCCCGCAGGACAGCAGCAAAGACTTCGATAACGACCTAACT
CTATTTGACTGGATGTCACAGTGGCGCCTACCGAAGCATAACGACCTAATGGTACGTGGCATGCTAGGCCGCTTGTTATT
TACTGAAGACGATATCAACAAGAAAGCGCGCAACTGTTCAGGTGGAGAGAAAAACCGCCTATTATTCGGCAAGTTAATGA
TGATGGACATCAACGTACTGGTAATGGATGAGCCAACTAACCACATGGATATGGAAGCGATTGAAGCGTTAAACAATGCA
CTTAAAGCGTATGAAGGTACGCTGATTTTCGTTAGCCACGACCGTGAGTTTGTTTCATCTTTGGCAACTCGTATTATCGA
TGTTAAAGACAAGAAGCTAGTTAACTTCCAAGGTACCTTCAACGAGTACATGGCAAGTCAGGCAGAACAAGCTGCTCAAA
AATTAGCGTAA

Upstream 100 bases:

>100_bases
CTGTATAATCCGCGGCTGTTTTGCCTCTCTAACAGGATTACAACTCGTAACCTGTTAACGTCTTTGGCTTTCACTTTTAT
TAATCACTCAGGATACTCTT

Downstream 100 bases:

>100_bases
TCGATATCTCTTGAATACGGCGATGTAAAATACCCCGTAAACCCCATAATAAAATGGCGCTAACCCCAGTGGTTAGCGCC
ATTTTTTATTTCATTTGCTC

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MISTANITMQFGPEPLFENISAKFGNGNRYGLIGANGCGKSTFMKILSGELAPTSGNVSITPGQKVGTLSQNQFAFEEYS
VIDAVIQGDAKLWEIKQERERIYSLPEMSEEDGMKVGELESEFAEMDGYSAESRAGEILLEAGIEEEFHFGLMSQVAPGF
KLRVLLAQALFSNPDILLLDEPTNNLDIHTINWLAEELNKRKCTMIIISHDRHFLNTVCTHMADIDYGELRIYPGNYEYF
MEASSLIQEQLLAGNAKKSAEMTELQDFVNRFGANASKAKQASSRAKKLEKISLDEVKSSSRMTPSLRFDDGKKMHRQAL
ILENVGHGFDGEILFEGGELILEAGAKLAVIGENGVGKSTFLRCLVNELQNNDGVIKWSENASIGYCPQDSSKDFDNDLT
LFDWMSQWRLPKHNDLMVRGMLGRLLFTEDDINKKARNCSGGEKNRLLFGKLMMMDINVLVMDEPTNHMDMEAIEALNNA
LKAYEGTLIFVSHDREFVSSLATRIIDVKDKKLVNFQGTFNEYMASQAEQAAQKLA

Sequences:

>Translated_536_residues
MISTANITMQFGPEPLFENISAKFGNGNRYGLIGANGCGKSTFMKILSGELAPTSGNVSITPGQKVGTLSQNQFAFEEYS
VIDAVIQGDAKLWEIKQERERIYSLPEMSEEDGMKVGELESEFAEMDGYSAESRAGEILLEAGIEEEFHFGLMSQVAPGF
KLRVLLAQALFSNPDILLLDEPTNNLDIHTINWLAEELNKRKCTMIIISHDRHFLNTVCTHMADIDYGELRIYPGNYEYF
MEASSLIQEQLLAGNAKKSAEMTELQDFVNRFGANASKAKQASSRAKKLEKISLDEVKSSSRMTPSLRFDDGKKMHRQAL
ILENVGHGFDGEILFEGGELILEAGAKLAVIGENGVGKSTFLRCLVNELQNNDGVIKWSENASIGYCPQDSSKDFDNDLT
LFDWMSQWRLPKHNDLMVRGMLGRLLFTEDDINKKARNCSGGEKNRLLFGKLMMMDINVLVMDEPTNHMDMEAIEALNNA
LKAYEGTLIFVSHDREFVSSLATRIIDVKDKKLVNFQGTFNEYMASQAEQAAQKLA
>Mature_536_residues
MISTANITMQFGPEPLFENISAKFGNGNRYGLIGANGCGKSTFMKILSGELAPTSGNVSITPGQKVGTLSQNQFAFEEYS
VIDAVIQGDAKLWEIKQERERIYSLPEMSEEDGMKVGELESEFAEMDGYSAESRAGEILLEAGIEEEFHFGLMSQVAPGF
KLRVLLAQALFSNPDILLLDEPTNNLDIHTINWLAEELNKRKCTMIIISHDRHFLNTVCTHMADIDYGELRIYPGNYEYF
MEASSLIQEQLLAGNAKKSAEMTELQDFVNRFGANASKAKQASSRAKKLEKISLDEVKSSSRMTPSLRFDDGKKMHRQAL
ILENVGHGFDGEILFEGGELILEAGAKLAVIGENGVGKSTFLRCLVNELQNNDGVIKWSENASIGYCPQDSSKDFDNDLT
LFDWMSQWRLPKHNDLMVRGMLGRLLFTEDDINKKARNCSGGEKNRLLFGKLMMMDINVLVMDEPTNHMDMEAIEALNNA
LKAYEGTLIFVSHDREFVSSLATRIIDVKDKKLVNFQGTFNEYMASQAEQAAQKLA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=538, Percent_Identity=29.7397769516729, Blast_Score=247, Evalue=2e-65,
Organism=Homo sapiens, GI10947137, Length=537, Percent_Identity=28.8640595903166, Blast_Score=231, Evalue=1e-60,
Organism=Homo sapiens, GI27881506, Length=537, Percent_Identity=28.8640595903166, Blast_Score=231, Evalue=1e-60,
Organism=Homo sapiens, GI69354671, Length=531, Percent_Identity=27.8719397363465, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI10947135, Length=531, Percent_Identity=27.8719397363465, Blast_Score=196, Evalue=4e-50,
Organism=Escherichia coli, GI1787041, Length=528, Percent_Identity=63.6363636363636, Blast_Score=723, Evalue=0.0,
Organism=Escherichia coli, GI1789751, Length=528, Percent_Identity=31.6287878787879, Blast_Score=267, Evalue=1e-72,
Organism=Escherichia coli, GI1787182, Length=514, Percent_Identity=30.7392996108949, Blast_Score=225, Evalue=5e-60,
Organism=Escherichia coli, GI2367384, Length=521, Percent_Identity=28.9827255278311, Blast_Score=215, Evalue=7e-57,
Organism=Escherichia coli, GI1787029, Length=239, Percent_Identity=27.1966527196653, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1788165, Length=181, Percent_Identity=29.2817679558011, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787500, Length=213, Percent_Identity=23.0046948356808, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI87081709, Length=221, Percent_Identity=28.0542986425339, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1787105, Length=204, Percent_Identity=27.4509803921569, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI48994943, Length=228, Percent_Identity=27.1929824561404, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1788450, Length=240, Percent_Identity=23.3333333333333, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1789032, Length=216, Percent_Identity=28.2407407407407, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI87081791, Length=236, Percent_Identity=23.3050847457627, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1790525, Length=225, Percent_Identity=24.4444444444444, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=537, Percent_Identity=29.0502793296089, Blast_Score=236, Evalue=2e-62,
Organism=Caenorhabditis elegans, GI17553372, Length=535, Percent_Identity=30.6542056074766, Blast_Score=223, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI17559834, Length=530, Percent_Identity=26.2264150943396, Blast_Score=214, Evalue=1e-55,
Organism=Saccharomyces cerevisiae, GI6320874, Length=534, Percent_Identity=29.7752808988764, Blast_Score=237, Evalue=3e-63,
Organism=Saccharomyces cerevisiae, GI6321121, Length=531, Percent_Identity=29.7551789077213, Blast_Score=230, Evalue=4e-61,
Organism=Saccharomyces cerevisiae, GI6323278, Length=413, Percent_Identity=24.6973365617433, Blast_Score=115, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6324314, Length=413, Percent_Identity=24.6973365617433, Blast_Score=110, Evalue=8e-25,
Organism=Saccharomyces cerevisiae, GI6325030, Length=391, Percent_Identity=25.0639386189258, Blast_Score=105, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24666836, Length=532, Percent_Identity=29.6992481203008, Blast_Score=250, Evalue=2e-66,
Organism=Drosophila melanogaster, GI24642252, Length=533, Percent_Identity=28.8930581613508, Blast_Score=234, Evalue=1e-61,
Organism=Drosophila melanogaster, GI18859989, Length=533, Percent_Identity=28.8930581613508, Blast_Score=234, Evalue=1e-61,
Organism=Drosophila melanogaster, GI24641342, Length=540, Percent_Identity=27.962962962963, Blast_Score=219, Evalue=5e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 59855; Mature: 59855

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISTANITMQFGPEPLFENISAKFGNGNRYGLIGANGCGKSTFMKILSGELAPTSGNVSI
CCCEEEEEEEECCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
TPGQKVGTLSQNQFAFEEYSVIDAVIQGDAKLWEIKQERERIYSLPEMSEEDGMKVGELE
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEECHHH
SEFAEMDGYSAESRAGEILLEAGIEEEFHFGLMSQVAPGFKLRVLLAQALFSNPDILLLD
HHHHHHCCCCCCHHHCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDIHTINWLAEELNKRKCTMIIISHDRHFLNTVCTHMADIDYGELRIYPGNYEYF
CCCCCCCEEEHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCHHHH
MEASSLIQEQLLAGNAKKSAEMTELQDFVNRFGANASKAKQASSRAKKLEKISLDEVKSS
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHC
SRMTPSLRFDDGKKMHRQALILENVGHGFDGEILFEGGELILEAGAKLAVIGENGVGKST
CCCCCCEECCCCHHHHHHHHHHHHCCCCCCCEEEEECCEEEEECCCEEEEEECCCCCHHH
FLRCLVNELQNNDGVIKWSENASIGYCPQDSSKDFDNDLTLFDWMSQWRLPKHNDLMVRG
HHHHHHHHHCCCCCEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHH
MLGRLLFTEDDINKKARNCSGGEKNRLLFGKLMMMDINVLVMDEPTNHMDMEAIEALNNA
HHHHHEECCCHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHH
LKAYEGTLIFVSHDREFVSSLATRIIDVKDKKLVNFQGTFNEYMASQAEQAAQKLA
HHHHCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MISTANITMQFGPEPLFENISAKFGNGNRYGLIGANGCGKSTFMKILSGELAPTSGNVSI
CCCEEEEEEEECCCHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
TPGQKVGTLSQNQFAFEEYSVIDAVIQGDAKLWEIKQERERIYSLPEMSEEDGMKVGELE
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEECHHH
SEFAEMDGYSAESRAGEILLEAGIEEEFHFGLMSQVAPGFKLRVLLAQALFSNPDILLLD
HHHHHHCCCCCCHHHCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDIHTINWLAEELNKRKCTMIIISHDRHFLNTVCTHMADIDYGELRIYPGNYEYF
CCCCCCCEEEHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCHHHH
MEASSLIQEQLLAGNAKKSAEMTELQDFVNRFGANASKAKQASSRAKKLEKISLDEVKSS
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHC
SRMTPSLRFDDGKKMHRQALILENVGHGFDGEILFEGGELILEAGAKLAVIGENGVGKST
CCCCCCEECCCCHHHHHHHHHHHHCCCCCCCEEEEECCEEEEECCCEEEEEECCCCCHHH
FLRCLVNELQNNDGVIKWSENASIGYCPQDSSKDFDNDLTLFDWMSQWRLPKHNDLMVRG
HHHHHHHHHCCCCCEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHH
MLGRLLFTEDDINKKARNCSGGEKNRLLFGKLMMMDINVLVMDEPTNHMDMEAIEALNNA
HHHHHEECCCHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHH
LKAYEGTLIFVSHDREFVSSLATRIIDVKDKKLVNFQGTFNEYMASQAEQAAQKLA
HHHHCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]