Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623921

Identifier: 167623921

GI number: 167623921

Start: 2402239

End: 2402655

Strand: Direct

Name: 167623921

Synonym: Shal_1992

Alternate gene names: NA

Gene position: 2402239-2402655 (Clockwise)

Preceding gene: 167623919

Following gene: 167623923

Centisome position: 45.96

GC content: 41.25

Gene sequence:

>417_bases
ATGAAAAACAAAATGTCACGTTTATTTCTCGGTTTAACAATGAGTTGTAGCGTACTCACTTTAGGTTTGTCCTCTGCTCA
AGCTGCTGACTGTTCAAAGCTTGCAGGCTGCGCCGAGAAGAGTTGTAAGGTTGAAGCCTTGATTGCGAATGCAAAGGCTA
AAGGCCACGACCAGATGGTCGCTCAGTTACAGTCCTCACTTAAACATGTTAAGGCTAATTGTACTGACGAAGGCATTAAG
AATGATTTACAGATAGAAATTGCTGGTGTGCAACTGCAACTCGAAAGCTATGAGGCTGAATTAAAGGCAGCGAAAGCTGC
TAATGAGTTAGATAGGACATATAAGTATACGCAAAAAGTCCTAGCAGAAAATTACAAGCTAACGCAGTTAAAGCAAGAGC
TTGCAAAAATGAAGTAG

Upstream 100 bases:

>100_bases
CTCTACTAAATGGACGTTTGGTAATGCAGTGTCTATAAAACAGTATGAGTAATTATTTTATTACAAACAAAGTTGTCGAT
ATCGCAATAGGGAATTTTTT

Downstream 100 bases:

>100_bases
CTTGTGGCTGTTTGTTTACAGCCCTTGGTTATTTACACGCTACCAAAAGTTAAGAGCTTTAGTGGTCAGCAAAACGGGCC
CCTTAGTGTTAAGGGGCATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MKNKMSRLFLGLTMSCSVLTLGLSSAQAADCSKLAGCAEKSCKVEALIANAKAKGHDQMVAQLQSSLKHVKANCTDEGIK
NDLQIEIAGVQLQLESYEAELKAAKAANELDRTYKYTQKVLAENYKLTQLKQELAKMK

Sequences:

>Translated_138_residues
MKNKMSRLFLGLTMSCSVLTLGLSSAQAADCSKLAGCAEKSCKVEALIANAKAKGHDQMVAQLQSSLKHVKANCTDEGIK
NDLQIEIAGVQLQLESYEAELKAAKAANELDRTYKYTQKVLAENYKLTQLKQELAKMK
>Mature_138_residues
MKNKMSRLFLGLTMSCSVLTLGLSSAQAADCSKLAGCAEKSCKVEALIANAKAKGHDQMVAQLQSSLKHVKANCTDEGIK
NDLQIEIAGVQLQLESYEAELKAAKAANELDRTYKYTQKVLAENYKLTQLKQELAKMK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15084; Mature: 15084

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKMSRLFLGLTMSCSVLTLGLSSAQAADCSKLAGCAEKSCKVEALIANAKAKGHDQMV
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHH
AQLQSSLKHVKANCTDEGIKNDLQIEIAGVQLQLESYEAELKAAKAANELDRTYKYTQKV
HHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
LAENYKLTQLKQELAKMK
HHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKNKMSRLFLGLTMSCSVLTLGLSSAQAADCSKLAGCAEKSCKVEALIANAKAKGHDQMV
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHH
AQLQSSLKHVKANCTDEGIKNDLQIEIAGVQLQLESYEAELKAAKAANELDRTYKYTQKV
HHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
LAENYKLTQLKQELAKMK
HHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA