| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167623907
Identifier: 167623907
GI number: 167623907
Start: 2381619
End: 2381915
Strand: Direct
Name: 167623907
Synonym: Shal_1978
Alternate gene names: NA
Gene position: 2381619-2381915 (Clockwise)
Preceding gene: 167623904
Following gene: 167623911
Centisome position: 45.56
GC content: 40.4
Gene sequence:
>297_bases ATGAAAAAAATAAAGCAACAGTATCGAATACGCATTCAACTCTATGGAGTTAGTGGTTACAGTCGCGATAGGGTGGTTTA TCCACTTGTGCGCAGTGGTCCACACAAACGCTTTTCTACTAAACAAGAAACAAGTTATTACTTCTTGCACATAATTGAAT GCAAAGGCTACTCAGTCAAGTTCAGAGTCGCGAGAGGAAAAGGGCTACCCAATCCTTGGGGGGATTATCCCTCATATGTA GATAAGGTCGCTAAAAGCTGGAAACATATCTCAAAACGCCGTAAGCAATATTTTTAA
Upstream 100 bases:
>100_bases AAATGCGGTAGAGCTCTCTACTCAAGACGACAGGGAAACGAGAGGATTATGAATTATTTTGAACAGGATCCCTTCTAGGT AATGTCAACCTGGAGGGTAA
Downstream 100 bases:
>100_bases ATGACAAAGCTAAGTTATATTTAGGTGTCAATGCGAATAGGCCTAGAGAGAACGATCTAGGCCTTACTGTTCGGTCATTA AGCGTAAGCACTAAACATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MKKIKQQYRIRIQLYGVSGYSRDRVVYPLVRSGPHKRFSTKQETSYYFLHIIECKGYSVKFRVARGKGLPNPWGDYPSYV DKVAKSWKHISKRRKQYF
Sequences:
>Translated_98_residues MKKIKQQYRIRIQLYGVSGYSRDRVVYPLVRSGPHKRFSTKQETSYYFLHIIECKGYSVKFRVARGKGLPNPWGDYPSYV DKVAKSWKHISKRRKQYF >Mature_98_residues MKKIKQQYRIRIQLYGVSGYSRDRVVYPLVRSGPHKRFSTKQETSYYFLHIIECKGYSVKFRVARGKGLPNPWGDYPSYV DKVAKSWKHISKRRKQYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11781; Mature: 11781
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIKQQYRIRIQLYGVSGYSRDRVVYPLVRSGPHKRFSTKQETSYYFLHIIECKGYSVK CCCCCCEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCEEE FRVARGKGLPNPWGDYPSYVDKVAKSWKHISKRRKQYF EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKIKQQYRIRIQLYGVSGYSRDRVVYPLVRSGPHKRFSTKQETSYYFLHIIECKGYSVK CCCCCCEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCEEE FRVARGKGLPNPWGDYPSYVDKVAKSWKHISKRRKQYF EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA