Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is 167623842

Identifier: 167623842

GI number: 167623842

Start: 2296798

End: 2297748

Strand: Reverse

Name: 167623842

Synonym: Shal_1912

Alternate gene names: NA

Gene position: 2297748-2296798 (Counterclockwise)

Preceding gene: 167623843

Following gene: 167623841

Centisome position: 43.96

GC content: 46.9

Gene sequence:

>951_bases
ATGTTTCTAGCGAGCCCTTCAGTCTTAAAGCGCAACGGTGTGCTTGGTATGAACAAGCGTAATATCGACTATATCGGTCG
ATATAACCCGCGCAAGTACTACAAACGAGTGGATGACAAGTTAACCACTAAGCAATTGGCATTAGCAAACAATATCGCCG
TGCCCGATCTAATTGGTACAGTGTCAGAGCAGCACGGTATTGCCGATATTCCTGCAATGGTTAACGACACCGACGGTTTT
GTGATTAAACCGTCTAAGGGATCTGGCGGTAAAGGAATTTTAGTTGTCACTAAGGTTGAACATGGTCGTTACTACAAGCC
AAATGGCCAAGAAGTCACGCCATCTGAGGTCTATCGTCATGTATCAAACGTGCTCAGCGGACTGTTTTCTCTTGGCGGAA
AACCTGATGTGGCCATTGTTGAAGGCTTGATTCAATTTGATCCCGTGTTCGATGGATACTCCTATGAAGGTGTACCGGAT
ATTCGTCTGATCATCTTTAAAGGCTTCCCCATCATGGGAATGTTACGCCTATCAACAGCAGCATCTGATGGTAAGGCCAA
CCTACATCAAGGGGCTGTCGGGGTGGGTATCGATATCGCGACGGGTAAAGGCTTACATGCAGTGCAGTTCGATCAGCCCG
TTGATTATCACCCCGACACTCAGAAGAAGCTGATCTCTATTGCAGTCCCGCAGTGGGACACCCTGCTACATACCGCATCT
ATGGCCTATGAAATGTCAGAGCTGGGTTATCTCGGAACCGATATGGTTTTGGATAAAAACAAGGGCCCACTTTTGCTTGA
GCTTAATGCCCGTCCAGGTCTTGCCATTCAAATAGCAAACGGTCGTGGCATTTTGCCAAACCTACGTCATGTTGAGAATA
TGGGTAACCACAACATGACTGTGGAAGAGCGCGTCGCGTATGCAAAAATACATTTCAGTGCTAACAGCTAA

Upstream 100 bases:

>100_bases
TTCACTTAGTGATTTTGGCGCTAGTGTTACTAATGGGTCAATACACTGGATACCGCTTGCTTGAGCTTAAACGCTTCAGA
CCTCTAGCTGGAGAAAAGTA

Downstream 100 bases:

>100_bases
ACAAGCTAAATGGTTTTTAAGTTCGTTTTTCATTGTTATCAGTTGGTTTAACACGGCAGCTCATGCTGCCGTGTCACCTA
TCCCACTCTTAGTAGAACAG

Product: alpha-L-glutamate ligase-like protein

Products: NA

Alternate protein names: Alpha-L-Glutamate Ligase-Related Protein; Alpha-L-Glutamate Ligase; Alpha-L-Glutamate Ligase Family Protein; Glutathione Synthase/Ribosomal; Glutathione Synthase/Ribosomal Protein; Ketopantoate Hydroxymethyltransferase; Glutathione Synthase/Ribosomal Glutaminyl Transferase; Alpha-L-Glutamate Ligase Homolog

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MFLASPSVLKRNGVLGMNKRNIDYIGRYNPRKYYKRVDDKLTTKQLALANNIAVPDLIGTVSEQHGIADIPAMVNDTDGF
VIKPSKGSGGKGILVVTKVEHGRYYKPNGQEVTPSEVYRHVSNVLSGLFSLGGKPDVAIVEGLIQFDPVFDGYSYEGVPD
IRLIIFKGFPIMGMLRLSTAASDGKANLHQGAVGVGIDIATGKGLHAVQFDQPVDYHPDTQKKLISIAVPQWDTLLHTAS
MAYEMSELGYLGTDMVLDKNKGPLLLELNARPGLAIQIANGRGILPNLRHVENMGNHNMTVEERVAYAKIHFSANS

Sequences:

>Translated_316_residues
MFLASPSVLKRNGVLGMNKRNIDYIGRYNPRKYYKRVDDKLTTKQLALANNIAVPDLIGTVSEQHGIADIPAMVNDTDGF
VIKPSKGSGGKGILVVTKVEHGRYYKPNGQEVTPSEVYRHVSNVLSGLFSLGGKPDVAIVEGLIQFDPVFDGYSYEGVPD
IRLIIFKGFPIMGMLRLSTAASDGKANLHQGAVGVGIDIATGKGLHAVQFDQPVDYHPDTQKKLISIAVPQWDTLLHTAS
MAYEMSELGYLGTDMVLDKNKGPLLLELNARPGLAIQIANGRGILPNLRHVENMGNHNMTVEERVAYAKIHFSANS
>Mature_316_residues
MFLASPSVLKRNGVLGMNKRNIDYIGRYNPRKYYKRVDDKLTTKQLALANNIAVPDLIGTVSEQHGIADIPAMVNDTDGF
VIKPSKGSGGKGILVVTKVEHGRYYKPNGQEVTPSEVYRHVSNVLSGLFSLGGKPDVAIVEGLIQFDPVFDGYSYEGVPD
IRLIIFKGFPIMGMLRLSTAASDGKANLHQGAVGVGIDIATGKGLHAVQFDQPVDYHPDTQKKLISIAVPQWDTLLHTAS
MAYEMSELGYLGTDMVLDKNKGPLLLELNARPGLAIQIANGRGILPNLRHVENMGNHNMTVEERVAYAKIHFSANS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34452; Mature: 34452

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLASPSVLKRNGVLGMNKRNIDYIGRYNPRKYYKRVDDKLTTKQLALANNIAVPDLIGT
CCCCCCCHHHCCCEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VSEQHGIADIPAMVNDTDGFVIKPSKGSGGKGILVVTKVEHGRYYKPNGQEVTPSEVYRH
HHHCCCCCCCCCEEECCCCEEEECCCCCCCCEEEEEEEECCCEEECCCCCCCCHHHHHHH
VSNVLSGLFSLGGKPDVAIVEGLIQFDPVFDGYSYEGVPDIRLIIFKGFPIMGMLRLSTA
HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECC
ASDGKANLHQGAVGVGIDIATGKGLHAVQFDQPVDYHPDTQKKLISIAVPQWDTLLHTAS
CCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCHHHEEEEEECCCHHHHHHHHH
MAYEMSELGYLGTDMVLDKNKGPLLLELNARPGLAIQIANGRGILPNLRHVENMGNHNMT
HHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCHHHHHHCCCCCCC
VEERVAYAKIHFSANS
HHHEEEEEEEEEECCC
>Mature Secondary Structure
MFLASPSVLKRNGVLGMNKRNIDYIGRYNPRKYYKRVDDKLTTKQLALANNIAVPDLIGT
CCCCCCCHHHCCCEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VSEQHGIADIPAMVNDTDGFVIKPSKGSGGKGILVVTKVEHGRYYKPNGQEVTPSEVYRH
HHHCCCCCCCCCEEECCCCEEEECCCCCCCCEEEEEEEECCCEEECCCCCCCCHHHHHHH
VSNVLSGLFSLGGKPDVAIVEGLIQFDPVFDGYSYEGVPDIRLIIFKGFPIMGMLRLSTA
HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECC
ASDGKANLHQGAVGVGIDIATGKGLHAVQFDQPVDYHPDTQKKLISIAVPQWDTLLHTAS
CCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCHHHEEEEEECCCHHHHHHHHH
MAYEMSELGYLGTDMVLDKNKGPLLLELNARPGLAIQIANGRGILPNLRHVENMGNHNMT
HHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCHHHHHHCCCCCCC
VEERVAYAKIHFSANS
HHHEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA