| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167623842
Identifier: 167623842
GI number: 167623842
Start: 2296798
End: 2297748
Strand: Reverse
Name: 167623842
Synonym: Shal_1912
Alternate gene names: NA
Gene position: 2297748-2296798 (Counterclockwise)
Preceding gene: 167623843
Following gene: 167623841
Centisome position: 43.96
GC content: 46.9
Gene sequence:
>951_bases ATGTTTCTAGCGAGCCCTTCAGTCTTAAAGCGCAACGGTGTGCTTGGTATGAACAAGCGTAATATCGACTATATCGGTCG ATATAACCCGCGCAAGTACTACAAACGAGTGGATGACAAGTTAACCACTAAGCAATTGGCATTAGCAAACAATATCGCCG TGCCCGATCTAATTGGTACAGTGTCAGAGCAGCACGGTATTGCCGATATTCCTGCAATGGTTAACGACACCGACGGTTTT GTGATTAAACCGTCTAAGGGATCTGGCGGTAAAGGAATTTTAGTTGTCACTAAGGTTGAACATGGTCGTTACTACAAGCC AAATGGCCAAGAAGTCACGCCATCTGAGGTCTATCGTCATGTATCAAACGTGCTCAGCGGACTGTTTTCTCTTGGCGGAA AACCTGATGTGGCCATTGTTGAAGGCTTGATTCAATTTGATCCCGTGTTCGATGGATACTCCTATGAAGGTGTACCGGAT ATTCGTCTGATCATCTTTAAAGGCTTCCCCATCATGGGAATGTTACGCCTATCAACAGCAGCATCTGATGGTAAGGCCAA CCTACATCAAGGGGCTGTCGGGGTGGGTATCGATATCGCGACGGGTAAAGGCTTACATGCAGTGCAGTTCGATCAGCCCG TTGATTATCACCCCGACACTCAGAAGAAGCTGATCTCTATTGCAGTCCCGCAGTGGGACACCCTGCTACATACCGCATCT ATGGCCTATGAAATGTCAGAGCTGGGTTATCTCGGAACCGATATGGTTTTGGATAAAAACAAGGGCCCACTTTTGCTTGA GCTTAATGCCCGTCCAGGTCTTGCCATTCAAATAGCAAACGGTCGTGGCATTTTGCCAAACCTACGTCATGTTGAGAATA TGGGTAACCACAACATGACTGTGGAAGAGCGCGTCGCGTATGCAAAAATACATTTCAGTGCTAACAGCTAA
Upstream 100 bases:
>100_bases TTCACTTAGTGATTTTGGCGCTAGTGTTACTAATGGGTCAATACACTGGATACCGCTTGCTTGAGCTTAAACGCTTCAGA CCTCTAGCTGGAGAAAAGTA
Downstream 100 bases:
>100_bases ACAAGCTAAATGGTTTTTAAGTTCGTTTTTCATTGTTATCAGTTGGTTTAACACGGCAGCTCATGCTGCCGTGTCACCTA TCCCACTCTTAGTAGAACAG
Product: alpha-L-glutamate ligase-like protein
Products: NA
Alternate protein names: Alpha-L-Glutamate Ligase-Related Protein; Alpha-L-Glutamate Ligase; Alpha-L-Glutamate Ligase Family Protein; Glutathione Synthase/Ribosomal; Glutathione Synthase/Ribosomal Protein; Ketopantoate Hydroxymethyltransferase; Glutathione Synthase/Ribosomal Glutaminyl Transferase; Alpha-L-Glutamate Ligase Homolog
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MFLASPSVLKRNGVLGMNKRNIDYIGRYNPRKYYKRVDDKLTTKQLALANNIAVPDLIGTVSEQHGIADIPAMVNDTDGF VIKPSKGSGGKGILVVTKVEHGRYYKPNGQEVTPSEVYRHVSNVLSGLFSLGGKPDVAIVEGLIQFDPVFDGYSYEGVPD IRLIIFKGFPIMGMLRLSTAASDGKANLHQGAVGVGIDIATGKGLHAVQFDQPVDYHPDTQKKLISIAVPQWDTLLHTAS MAYEMSELGYLGTDMVLDKNKGPLLLELNARPGLAIQIANGRGILPNLRHVENMGNHNMTVEERVAYAKIHFSANS
Sequences:
>Translated_316_residues MFLASPSVLKRNGVLGMNKRNIDYIGRYNPRKYYKRVDDKLTTKQLALANNIAVPDLIGTVSEQHGIADIPAMVNDTDGF VIKPSKGSGGKGILVVTKVEHGRYYKPNGQEVTPSEVYRHVSNVLSGLFSLGGKPDVAIVEGLIQFDPVFDGYSYEGVPD IRLIIFKGFPIMGMLRLSTAASDGKANLHQGAVGVGIDIATGKGLHAVQFDQPVDYHPDTQKKLISIAVPQWDTLLHTAS MAYEMSELGYLGTDMVLDKNKGPLLLELNARPGLAIQIANGRGILPNLRHVENMGNHNMTVEERVAYAKIHFSANS >Mature_316_residues MFLASPSVLKRNGVLGMNKRNIDYIGRYNPRKYYKRVDDKLTTKQLALANNIAVPDLIGTVSEQHGIADIPAMVNDTDGF VIKPSKGSGGKGILVVTKVEHGRYYKPNGQEVTPSEVYRHVSNVLSGLFSLGGKPDVAIVEGLIQFDPVFDGYSYEGVPD IRLIIFKGFPIMGMLRLSTAASDGKANLHQGAVGVGIDIATGKGLHAVQFDQPVDYHPDTQKKLISIAVPQWDTLLHTAS MAYEMSELGYLGTDMVLDKNKGPLLLELNARPGLAIQIANGRGILPNLRHVENMGNHNMTVEERVAYAKIHFSANS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34452; Mature: 34452
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLASPSVLKRNGVLGMNKRNIDYIGRYNPRKYYKRVDDKLTTKQLALANNIAVPDLIGT CCCCCCCHHHCCCEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH VSEQHGIADIPAMVNDTDGFVIKPSKGSGGKGILVVTKVEHGRYYKPNGQEVTPSEVYRH HHHCCCCCCCCCEEECCCCEEEECCCCCCCCEEEEEEEECCCEEECCCCCCCCHHHHHHH VSNVLSGLFSLGGKPDVAIVEGLIQFDPVFDGYSYEGVPDIRLIIFKGFPIMGMLRLSTA HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECC ASDGKANLHQGAVGVGIDIATGKGLHAVQFDQPVDYHPDTQKKLISIAVPQWDTLLHTAS CCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCHHHEEEEEECCCHHHHHHHHH MAYEMSELGYLGTDMVLDKNKGPLLLELNARPGLAIQIANGRGILPNLRHVENMGNHNMT HHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCHHHHHHCCCCCCC VEERVAYAKIHFSANS HHHEEEEEEEEEECCC >Mature Secondary Structure MFLASPSVLKRNGVLGMNKRNIDYIGRYNPRKYYKRVDDKLTTKQLALANNIAVPDLIGT CCCCCCCHHHCCCEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH VSEQHGIADIPAMVNDTDGFVIKPSKGSGGKGILVVTKVEHGRYYKPNGQEVTPSEVYRH HHHCCCCCCCCCEEECCCCEEEECCCCCCCCEEEEEEEECCCEEECCCCCCCCHHHHHHH VSNVLSGLFSLGGKPDVAIVEGLIQFDPVFDGYSYEGVPDIRLIIFKGFPIMGMLRLSTA HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECC ASDGKANLHQGAVGVGIDIATGKGLHAVQFDQPVDYHPDTQKKLISIAVPQWDTLLHTAS CCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCHHHEEEEEECCCHHHHHHHHH MAYEMSELGYLGTDMVLDKNKGPLLLELNARPGLAIQIANGRGILPNLRHVENMGNHNMT HHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCHHHHHHCCCCCCC VEERVAYAKIHFSANS HHHEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA