Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623819

Identifier: 167623819

GI number: 167623819

Start: 2270399

End: 2270683

Strand: Direct

Name: 167623819

Synonym: Shal_1889

Alternate gene names: NA

Gene position: 2270399-2270683 (Clockwise)

Preceding gene: 167623818

Following gene: 167623821

Centisome position: 43.44

GC content: 35.44

Gene sequence:

>285_bases
GTGTTTTTCAACCAGCACAGCCAATCAGAAGCCGCTATCCGCAAAGATATAGCAGAACGTTTGCCTCGTCTTATTACTGA
AAATAGCCCTAAACTTAAATTTGCCAATCCACTTCGATTTAATGGCTATAAAATTCATGAATACAAAATAGTGGCAGATA
AACAGCTGACCTGTAGAGTTGCTTACACTTATGAGAATGACACAATAACAATTATTTATATGAGTGAGACTCTGATTAAA
CGTCAATTCTGTCAATTACTCGCTAAAACAGATCTTATCTCTTAA

Upstream 100 bases:

>100_bases
TATTCGTGCATTGGGGGGCTAGCGTTTATAGTTAAAGATATTTTATTTGGGAATAAGCTGATTCATGCTAATCGTCTATG
ATAACAATCGCCACTTAAGA

Downstream 100 bases:

>100_bases
TGACCTAAGCCGTTATTCAATGGAGAGTCATAATGCAAATTATTTTTCATGTAAATGAGCCCGAACGCTGGAATATGGCA
TTGAATAATATTCAGAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MFFNQHSQSEAAIRKDIAERLPRLITENSPKLKFANPLRFNGYKIHEYKIVADKQLTCRVAYTYENDTITIIYMSETLIK
RQFCQLLAKTDLIS

Sequences:

>Translated_94_residues
MFFNQHSQSEAAIRKDIAERLPRLITENSPKLKFANPLRFNGYKIHEYKIVADKQLTCRVAYTYENDTITIIYMSETLIK
RQFCQLLAKTDLIS
>Mature_94_residues
MFFNQHSQSEAAIRKDIAERLPRLITENSPKLKFANPLRFNGYKIHEYKIVADKQLTCRVAYTYENDTITIIYMSETLIK
RQFCQLLAKTDLIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11059; Mature: 11059

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFNQHSQSEAAIRKDIAERLPRLITENSPKLKFANPLRFNGYKIHEYKIVADKQLTCRV
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCEECCCEEEEEEEEEECCCEEEEE
AYTYENDTITIIYMSETLIKRQFCQLLAKTDLIS
EEEECCCEEEEEEECHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFFNQHSQSEAAIRKDIAERLPRLITENSPKLKFANPLRFNGYKIHEYKIVADKQLTCRV
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCEECCCEEEEEEEEEECCCEEEEE
AYTYENDTITIIYMSETLIKRQFCQLLAKTDLIS
EEEECCCEEEEEEECHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA