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The map label for this gene is rmuC [H]

Identifier: 167623793

GI number: 167623793

Start: 2235970

End: 2237475

Strand: Reverse

Name: rmuC [H]

Synonym: Shal_1863

Alternate gene names: 167623793

Gene position: 2237475-2235970 (Counterclockwise)

Preceding gene: 167623796

Following gene: 167623792

Centisome position: 42.81

GC content: 41.63

Gene sequence:

>1506_bases
ATGCCTTTAGAGCTTACATTTTCAAACGCACAAATTGTTATCATCATTGCTATCGCTTTTCTTTCTATGTTAATTGGCGC
GTTATTTAATCAGCGTAAAACCCGCAGCAAATGGGAGTACGTGCGAAGCCAACTTATGGGTGAGATGGAGCAAACCAAAC
TAGAACTAAATAGTGAAATTCTTGATTTAAAAGAAACTATTCACCATAAAGAATTAGTCGTAGACCAATATCAGGACAAA
CTAGAGTTTCGCTTAGAACAATTAGGCAAGGCACAAGCGCAAGCTGAAAGAACCCTAGAGCTGGAACAGGCTCTAGCAGA
AAATCAACGTAAGCAGATGGAAACTCAGTTAGCCCTTTCGAAATCTAATGCCATGCAGCAAACTCTAACAGCCAGTTTTG
ATGCGAAACAACAAGCACTCAACGACAAAATTCAATTACTCGAAGACTCTGAAGTACGATTGAATGCCCAGTTTGAAAAC
CTAGCAACTAAGATTTTTGAAGCCCGCAGTGAAAAACTACAGTCGCAAAATAATCAACAGTTAGACAGCGTCCTGGCACC
TTTTAAACAACAGATTGAAGGGTTTAGGGCTCAAGTTCAGGCATCATACTCTCATGAGCAAACTCAGCGAAGTGCCCTTA
AGCACCAGCTCGACTCATTAACTGAACTTAACTTAAAGATGAGCCAAGATGCTGTTAACCTCACCAAAGCACTTAAGGGT
GATAACAAACAGCAAGGCAATTGGGGCGAAGTGATCCTTGAGCGTGTTTTACAAGAGAGTGGCCTTAGAGAAGGACATGA
GTACGACACTCAGACAGATCTAAAAAGTGACAGTGGTAAGCGCTTTAAGCCTGATGTCATCGTGCACTTGCCTGAAAATA
AAGATGTGGTTATCGATGCAAAAATGTCGCTTGTTGCCTATGAAAGATACTTTAACAGTGACGATGACGAAATTCGCGCA
CAGGCGATTAAAGAACACATCATCTCTGTTCGTGGTCATATAAAGGGATTAAGCCAGAAGGATTATCAAAAGCTTCACGG
CGTTAAAAGCTTAGATTATGTATTGATGTTCATTCCACTTGAGCCTGCGTTCCTACTGGCGCTTGAACACGATCCAAGTC
TAGTTAACTTTGCACTTGAAAGTAATATCATGCTGGTTAGCCCAACTAACTTACTGGTCGCACTGCGAACTATTAACAAC
ATTTGGCGTTATGAGTACCAGAATCAAAATGCTCAGGTAATTGCTAAACAAGCCGGAAAAATTTACGACAAGCTGTGCGG
TTATTTAGACGATATGGATAAACTGGGGCGCTCACTTGAGGCGGCAGATAAAAACTTTACTAACGCCATGAATAAGTTAT
CGACAGGTAAAGGCAACGTCATCCGTCAAGCGCATCAAATGCAACAGTTAGGCGTGCAAACCAGTAAAAAAGTGGATGCC
CAACTCTTGGATAAAGCGCTAAGCTTAGCTGATGGTGAATTTCATCAAGACTCACGACTAGGCTAA

Upstream 100 bases:

>100_bases
TGTCTGCATCACTTACTTTACTAATCACTTACTCAGGCTTGCAGTGTTTAAATCATCGTGCCACTCTAGCGTTTCATTTA
CATGTTAAGAGCCTTCTCAC

Downstream 100 bases:

>100_bases
ATCACAAGCTATAAAACAAAGTCACAAAGTTGATACCACTTGGCACATAATAGGGATAGTTAAGAGGATTCTTGCAAATG
CACAAGCAGTTACGTCGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 500

Protein sequence:

>501_residues
MPLELTFSNAQIVIIIAIAFLSMLIGALFNQRKTRSKWEYVRSQLMGEMEQTKLELNSEILDLKETIHHKELVVDQYQDK
LEFRLEQLGKAQAQAERTLELEQALAENQRKQMETQLALSKSNAMQQTLTASFDAKQQALNDKIQLLEDSEVRLNAQFEN
LATKIFEARSEKLQSQNNQQLDSVLAPFKQQIEGFRAQVQASYSHEQTQRSALKHQLDSLTELNLKMSQDAVNLTKALKG
DNKQQGNWGEVILERVLQESGLREGHEYDTQTDLKSDSGKRFKPDVIVHLPENKDVVIDAKMSLVAYERYFNSDDDEIRA
QAIKEHIISVRGHIKGLSQKDYQKLHGVKSLDYVLMFIPLEPAFLLALEHDPSLVNFALESNIMLVSPTNLLVALRTINN
IWRYEYQNQNAQVIAKQAGKIYDKLCGYLDDMDKLGRSLEAADKNFTNAMNKLSTGKGNVIRQAHQMQQLGVQTSKKVDA
QLLDKALSLADGEFHQDSRLG

Sequences:

>Translated_501_residues
MPLELTFSNAQIVIIIAIAFLSMLIGALFNQRKTRSKWEYVRSQLMGEMEQTKLELNSEILDLKETIHHKELVVDQYQDK
LEFRLEQLGKAQAQAERTLELEQALAENQRKQMETQLALSKSNAMQQTLTASFDAKQQALNDKIQLLEDSEVRLNAQFEN
LATKIFEARSEKLQSQNNQQLDSVLAPFKQQIEGFRAQVQASYSHEQTQRSALKHQLDSLTELNLKMSQDAVNLTKALKG
DNKQQGNWGEVILERVLQESGLREGHEYDTQTDLKSDSGKRFKPDVIVHLPENKDVVIDAKMSLVAYERYFNSDDDEIRA
QAIKEHIISVRGHIKGLSQKDYQKLHGVKSLDYVLMFIPLEPAFLLALEHDPSLVNFALESNIMLVSPTNLLVALRTINN
IWRYEYQNQNAQVIAKQAGKIYDKLCGYLDDMDKLGRSLEAADKNFTNAMNKLSTGKGNVIRQAHQMQQLGVQTSKKVDA
QLLDKALSLADGEFHQDSRLG
>Mature_500_residues
PLELTFSNAQIVIIIAIAFLSMLIGALFNQRKTRSKWEYVRSQLMGEMEQTKLELNSEILDLKETIHHKELVVDQYQDKL
EFRLEQLGKAQAQAERTLELEQALAENQRKQMETQLALSKSNAMQQTLTASFDAKQQALNDKIQLLEDSEVRLNAQFENL
ATKIFEARSEKLQSQNNQQLDSVLAPFKQQIEGFRAQVQASYSHEQTQRSALKHQLDSLTELNLKMSQDAVNLTKALKGD
NKQQGNWGEVILERVLQESGLREGHEYDTQTDLKSDSGKRFKPDVIVHLPENKDVVIDAKMSLVAYERYFNSDDDEIRAQ
AIKEHIISVRGHIKGLSQKDYQKLHGVKSLDYVLMFIPLEPAFLLALEHDPSLVNFALESNIMLVSPTNLLVALRTINNI
WRYEYQNQNAQVIAKQAGKIYDKLCGYLDDMDKLGRSLEAADKNFTNAMNKLSTGKGNVIRQAHQMQQLGVQTSKKVDAQ
LLDKALSLADGEFHQDSRLG

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=360, Percent_Identity=55.5555555555556, Blast_Score=431, Evalue=1e-122,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 57030; Mature: 56898

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLELTFSNAQIVIIIAIAFLSMLIGALFNQRKTRSKWEYVRSQLMGEMEQTKLELNSEI
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDLKETIHHKELVVDQYQDKLEFRLEQLGKAQAQAERTLELEQALAENQRKQMETQLALS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSNAMQQTLTASFDAKQQALNDKIQLLEDSEVRLNAQFENLATKIFEARSEKLQSQNNQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHH
LDSVLAPFKQQIEGFRAQVQASYSHEQTQRSALKHQLDSLTELNLKMSQDAVNLTKALKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
DNKQQGNWGEVILERVLQESGLREGHEYDTQTDLKSDSGKRFKPDVIVHLPENKDVVIDA
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEC
KMSLVAYERYFNSDDDEIRAQAIKEHIISVRGHIKGLSQKDYQKLHGVKSLDYVLMFIPL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHCEEEEEEEC
EPAFLLALEHDPSLVNFALESNIMLVSPTNLLVALRTINNIWRYEYQNQNAQVIAKQAGK
CCEEEEEEECCCCCEEHEECCCEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IYDKLCGYLDDMDKLGRSLEAADKNFTNAMNKLSTGKGNVIRQAHQMQQLGVQTSKKVDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHH
QLLDKALSLADGEFHQDSRLG
HHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PLELTFSNAQIVIIIAIAFLSMLIGALFNQRKTRSKWEYVRSQLMGEMEQTKLELNSEI
CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDLKETIHHKELVVDQYQDKLEFRLEQLGKAQAQAERTLELEQALAENQRKQMETQLALS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSNAMQQTLTASFDAKQQALNDKIQLLEDSEVRLNAQFENLATKIFEARSEKLQSQNNQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHH
LDSVLAPFKQQIEGFRAQVQASYSHEQTQRSALKHQLDSLTELNLKMSQDAVNLTKALKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
DNKQQGNWGEVILERVLQESGLREGHEYDTQTDLKSDSGKRFKPDVIVHLPENKDVVIDA
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEC
KMSLVAYERYFNSDDDEIRAQAIKEHIISVRGHIKGLSQKDYQKLHGVKSLDYVLMFIPL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHCEEEEEEEC
EPAFLLALEHDPSLVNFALESNIMLVSPTNLLVALRTINNIWRYEYQNQNAQVIAKQAGK
CCEEEEEEECCCCCEEHEECCCEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IYDKLCGYLDDMDKLGRSLEAADKNFTNAMNKLSTGKGNVIRQAHQMQQLGVQTSKKVDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHH
QLLDKALSLADGEFHQDSRLG
HHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]