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The map label for this gene is ycgG [C]

Identifier: 167623791

GI number: 167623791

Start: 2233068

End: 2233805

Strand: Reverse

Name: ycgG [C]

Synonym: Shal_1861

Alternate gene names: 167623791

Gene position: 2233805-2233068 (Counterclockwise)

Preceding gene: 167623792

Following gene: 167623790

Centisome position: 42.74

GC content: 39.97

Gene sequence:

>738_bases
ATGTCCGAACTTAACCAACTTAGCCTTAGCGCAGAATATCAACCACTCATTGAGCCGAATACATTACAGACAATGGGTTA
TGAAGCTCTTTCTCGCTTCTATGATCAAACTGGACAAACAATTGCGCCAAATCTCGTGTTTGAGCAATTGCATCAAAGAG
AAGAATGTTTGGCTGCAGTTGAATTTGCGGCAAAAACTTTTCAAATACAGCACGCTCCGAAAGGCGGACGACTGTTTGTG
AATATCGACCCTCACGCAGTTGAAACCAATAATCACCACATGATTAAGTTATTAAAAACCCACCCTGACATCTGTGTTGA
AATCATAGAGAACACCTGTATCAGCGATGCAACACTGTCTATCGACTTTGCTAACCAGCTAATTGAGCAAAATATAGGAG
TCGCTCTCGATGATGTAGGTGCCCCACACTCAATGCTGTCGATTGAGTTAATGAGTAAAGTCGATTGCATTAAATTCGAT
AAGCACTGGCTTAAAAAAGCAAATAGACCAGAGTATTGCTTATTACTGAATTCATTAATCAATTTTGCTAAGAAAAGTCA
TAAGTTAACCATATTGGAAGGCATAGAAACTCAGTCCCAACTAGACTTTGCTCGCAGTATTGATGTTGATTTGGTGCAAG
GCTTCATATTCAAATCAGCATTTTTCCGCCCACATAGTCAACTCCCGCTAGCCGATATACTCTTGTCCGATAAGTTTCAA
TGTGAGCTATTGCTTTAA

Upstream 100 bases:

>100_bases
TTTCACAACAGATTAATATTAAAGCAAAAAATCTCGAGTGTAGTCATGTTTGGATTCAAACGTGTTAATATAAACAATTA
TCATTTAGCATCTTAGATTT

Downstream 100 bases:

>100_bases
AGTCACTGGAAAGCATCCCCCTTTTCCACCATAGTAAAGGCACGCCGAATTGATAACTAAAATATAATTGGCAGCAGGGA
TCACTATGCACAATGACCAT

Product: diguanylate phosphodiesterase

Products: NA

Alternate protein names: Diguanylate Cyclase/Phosphodiesterase; EAL Domain-Containing Protein; EAL Domain Protein; Signal Transduction Protein; EAL/GGDEF Domain-Containing Protein; Cyclic Diguanylate Phosphodiesterase; Signaling Protein; Sensory Box/GGDEF Family Protein; FOG EAL Domain Protein; Two-Component Response Regulator; EALResponse Regulator Receiver; Transcriptional Regulator; GGDEFCBS:EAL Domain-Containing Protein; Diguanylate Cyclase; Sensory Box/Ggdef Family Protein; EAL Domain Protein Diguanylate Phosphodiesterase

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSELNQLSLSAEYQPLIEPNTLQTMGYEALSRFYDQTGQTIAPNLVFEQLHQREECLAAVEFAAKTFQIQHAPKGGRLFV
NIDPHAVETNNHHMIKLLKTHPDICVEIIENTCISDATLSIDFANQLIEQNIGVALDDVGAPHSMLSIELMSKVDCIKFD
KHWLKKANRPEYCLLLNSLINFAKKSHKLTILEGIETQSQLDFARSIDVDLVQGFIFKSAFFRPHSQLPLADILLSDKFQ
CELLL

Sequences:

>Translated_245_residues
MSELNQLSLSAEYQPLIEPNTLQTMGYEALSRFYDQTGQTIAPNLVFEQLHQREECLAAVEFAAKTFQIQHAPKGGRLFV
NIDPHAVETNNHHMIKLLKTHPDICVEIIENTCISDATLSIDFANQLIEQNIGVALDDVGAPHSMLSIELMSKVDCIKFD
KHWLKKANRPEYCLLLNSLINFAKKSHKLTILEGIETQSQLDFARSIDVDLVQGFIFKSAFFRPHSQLPLADILLSDKFQ
CELLL
>Mature_244_residues
SELNQLSLSAEYQPLIEPNTLQTMGYEALSRFYDQTGQTIAPNLVFEQLHQREECLAAVEFAAKTFQIQHAPKGGRLFVN
IDPHAVETNNHHMIKLLKTHPDICVEIIENTCISDATLSIDFANQLIEQNIGVALDDVGAPHSMLSIELMSKVDCIKFDK
HWLKKANRPEYCLLLNSLINFAKKSHKLTILEGIETQSQLDFARSIDVDLVQGFIFKSAFFRPHSQLPLADILLSDKFQC
ELLL

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27722; Mature: 27591

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELNQLSLSAEYQPLIEPNTLQTMGYEALSRFYDQTGQTIAPNLVFEQLHQREECLAAV
CCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
EFAAKTFQIQHAPKGGRLFVNIDPHAVETNNHHMIKLLKTHPDICVEIIENTCISDATLS
HHHHHHEEEEECCCCCEEEEEECCCEEECCCCEEEEEECCCHHHHHHHHHHCCCCCCEEE
IDFANQLIEQNIGVALDDVGAPHSMLSIELMSKVDCIKFDKHWLKKANRPEYCLLLNSLI
HHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
NFAKKSHKLTILEGIETQSQLDFARSIDVDLVQGFIFKSAFFRPHSQLPLADILLSDKFQ
HHHHHCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCE
CELLL
EEEEC
>Mature Secondary Structure 
SELNQLSLSAEYQPLIEPNTLQTMGYEALSRFYDQTGQTIAPNLVFEQLHQREECLAAV
CCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
EFAAKTFQIQHAPKGGRLFVNIDPHAVETNNHHMIKLLKTHPDICVEIIENTCISDATLS
HHHHHHEEEEECCCCCEEEEEECCCEEECCCCEEEEEECCCHHHHHHHHHHCCCCCCEEE
IDFANQLIEQNIGVALDDVGAPHSMLSIELMSKVDCIKFDKHWLKKANRPEYCLLLNSLI
HHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
NFAKKSHKLTILEGIETQSQLDFARSIDVDLVQGFIFKSAFFRPHSQLPLADILLSDKFQ
HHHHHCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCE
CELLL
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA