Click here to switch to the map view.

The map label for this gene is yceH [C]

Identifier: 167623731

GI number: 167623731

Start: 2153201

End: 2153848

Strand: Reverse

Name: yceH [C]

Synonym: Shal_1801

Alternate gene names: 167623731

Gene position: 2153848-2153201 (Counterclockwise)

Preceding gene: 167623732

Following gene: 167623730

Centisome position: 41.21

GC content: 44.6

Gene sequence:

>648_bases
ATGGAACTGACTCCACATGAAGCGCGCGTTATTGGGGTATTACTCGAAAAAGAGATCACCACGCCAGAGCAATACCCACT
TTCTCTCAACAGTTTAACCTCTGGCTGTAATCAAAAAACTAGCCGTGAGCCTGTTCTTAGCCTCAGTGAATCTGAGGTAC
AAAATACCTTAGATGACCTCACTAAAAAAAGACTGATTTCAGAACAATCAGGCTTCGGTAGCCGAGTGGTAAAATACAAG
CATCGTTTTTGTAATACCGAGTTTAGCGATCTACAGCTTAAATCTTCCGAGCTTGCCGTTGTTTGCCTTCTATTACTCAG
AGGACCACAAACTCCCGGTGAACTCAGAACTCGAAGTAATCGACTACATGAGTTTCATGATGTCAGTGAAGTTGAAGCGA
CATTAAATGAACTCCAAAGACGAGAGTCCCCTCTTGTCATGCTATTAGCTAAAGAGCCTGGCAAGCGTGAAGCTCGCTAC
CGTCAACTGTTTACTGAGGTCGATGACACCGAAATACAATCAACGCCCGCCCAAAGCACAGAGTATTCAATCACTCAGCA
TGCCAGTGGGCTTGAAGCTAGAGTCAACACGCTTGAGCAACAAGTGGCTGAGTTAACAGAACAGATCAAGCATCTGCTAG
ATAGATAA

Upstream 100 bases:

>100_bases
CATAAACCCAGCAACTGCATAGTTAAGCCCGCTAAACCACCTTTGCATTAAAGCATGGCTCTGTTATAACAAAGCCATGC
TTTTTTATTAAGAGGTTAAT

Downstream 100 bases:

>100_bases
GCTTTTAACGATTAACTATCTATCATGTTAATTTACGAGGTTAAGGTTAACGCATTTAAGCAATAGGTGTTAACCTGACC
CCTTCTACCGCTCTTAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MELTPHEARVIGVLLEKEITTPEQYPLSLNSLTSGCNQKTSREPVLSLSESEVQNTLDDLTKKRLISEQSGFGSRVVKYK
HRFCNTEFSDLQLKSSELAVVCLLLLRGPQTPGELRTRSNRLHEFHDVSEVEATLNELQRRESPLVMLLAKEPGKREARY
RQLFTEVDDTEIQSTPAQSTEYSITQHASGLEARVNTLEQQVAELTEQIKHLLDR

Sequences:

>Translated_215_residues
MELTPHEARVIGVLLEKEITTPEQYPLSLNSLTSGCNQKTSREPVLSLSESEVQNTLDDLTKKRLISEQSGFGSRVVKYK
HRFCNTEFSDLQLKSSELAVVCLLLLRGPQTPGELRTRSNRLHEFHDVSEVEATLNELQRRESPLVMLLAKEPGKREARY
RQLFTEVDDTEIQSTPAQSTEYSITQHASGLEARVNTLEQQVAELTEQIKHLLDR
>Mature_215_residues
MELTPHEARVIGVLLEKEITTPEQYPLSLNSLTSGCNQKTSREPVLSLSESEVQNTLDDLTKKRLISEQSGFGSRVVKYK
HRFCNTEFSDLQLKSSELAVVCLLLLRGPQTPGELRTRSNRLHEFHDVSEVEATLNELQRRESPLVMLLAKEPGKREARY
RQLFTEVDDTEIQSTPAQSTEYSITQHASGLEARVNTLEQQVAELTEQIKHLLDR

Specific function: Unknown

COG id: COG3132

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0502 family

Homologues:

Organism=Escherichia coli, GI1787306, Length=214, Percent_Identity=54.2056074766355, Blast_Score=228, Evalue=2e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1801_SHEHH (B0TQX1)

Other databases:

- EMBL:   CP000931
- RefSeq:   YP_001674025.1
- ProteinModelPortal:   B0TQX1
- SMR:   B0TQX1
- GeneID:   5902686
- GenomeReviews:   CP000931_GR
- KEGG:   shl:Shal_1801
- HOGENOM:   HBG298268
- OMA:   TTPDQYP
- ProtClustDB:   CLSK982156
- BioCyc:   SHAL458817:SHAL_1801-MONOMER
- HAMAP:   MF_01584
- InterPro:   IPR007432
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF04337 DUF480

EC number: NA

Molecular weight: Translated: 24444; Mature: 24444

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELTPHEARVIGVLLEKEITTPEQYPLSLNSLTSGCNQKTSREPVLSLSESEVQNTLDDL
CCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHH
TKKRLISEQSGFGSRVVKYKHRFCNTEFSDLQLKSSELAVVCLLLLRGPQTPGELRTRSN
HHHHHHHHCCCCHHHHHHHHHHHCCCCHHHCEECHHHHHHHHHHHHHCCCCCHHHHHHHH
RLHEFHDVSEVEATLNELQRRESPLVMLLAKEPGKREARYRQLFTEVDDTEIQSTPAQST
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHCCCCCCCC
EYSITQHASGLEARVNTLEQQVAELTEQIKHLLDR
CHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MELTPHEARVIGVLLEKEITTPEQYPLSLNSLTSGCNQKTSREPVLSLSESEVQNTLDDL
CCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHH
TKKRLISEQSGFGSRVVKYKHRFCNTEFSDLQLKSSELAVVCLLLLRGPQTPGELRTRSN
HHHHHHHHCCCCHHHHHHHHHHHCCCCHHHCEECHHHHHHHHHHHHHCCCCCHHHHHHHH
RLHEFHDVSEVEATLNELQRRESPLVMLLAKEPGKREARYRQLFTEVDDTEIQSTPAQST
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHCCCCCCCC
EYSITQHASGLEARVNTLEQQVAELTEQIKHLLDR
CHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA