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The map label for this gene is 167623718

Identifier: 167623718

GI number: 167623718

Start: 2138837

End: 2139706

Strand: Reverse

Name: 167623718

Synonym: Shal_1788

Alternate gene names: NA

Gene position: 2139706-2138837 (Counterclockwise)

Preceding gene: 167623720

Following gene: 167623717

Centisome position: 40.94

GC content: 38.74

Gene sequence:

>870_bases
ATGATTTGGGCGATTTATGTATCGGATAAACCTCACTCGCGAGTTAACTTTCCAATTGGAATGAGCAATGGCATTTGGGG
AGTGCACGAGAGTAAAAAGAAAACGATTAAGCGTATTGAGGCTAATGACTACGTTGTCTTTGTTTATTCTATTTCTTGGT
TAAAAGCTGAAGGAACTCCACCCAAAGGCTTTTCTAGAGTAGGTAAAGATAAGTTAGACTTATTTAGAGGTAGTGTTCAG
AAAATAATTTTCGGCAAAGTAACCCGAGCCTACTACCAAGACGAAAAGGAAGTTTGGCCTGATGATACGTATCCCCACCG
CTTTAATTTCGAGATATTAGAGCGGCATGATAACGGCGTAATGTTTGGCACAGAGTTCTACCATTCATCATTTGTTGAAG
CTGTTCGCTACTCAGCGTGTACTCAAGGTTCCATTACAGAAGTAAATGATATAAAAAACCTAACGCAGCTTAAAGGGGTA
TCTTCTGAGAATGTTGGTGATTACGGTGTTGATGAAGGGAAACCGATTTACAGAGTACATAAGACTAGGGAAAGAGACCC
CAAGCTTACAAAAGACAAGAAGCAACAGGTACTGTCTATAACTGGTAAACTATGCTGTGAGATATGTAATTTTGACTTCT
ATGAATGCTACGGTGATTTAGGGCTTGGCTTTGCTGAATGTCATCATCTCGAACCATTAGCATTGAGAGAAAGTAATAAG
AAAACAAAACTCGATGATTTAGCTATTTTATGCGCCAATTGCCACCGAATGATCCACTACCCAACCCAATGGCTATCAGT
AGAGGAGCTAAAAGAAAAATATGAAAGACAAAGAAACAAGTCTATTGATAAATCAACTGAAAGAGTTTAA

Upstream 100 bases:

>100_bases
GACCTCAAGAAAGCATCTTATGCTGAATTTGTAAGTTATGACTATTCAAGATGCTGTTATTTATTTAATATAAACATATA
GATAAAAATAAGGGTGCGTC

Downstream 100 bases:

>100_bases
CTCACAACGAGATTGGGCACAGTTCCACTCGCCTAAGAATTTAGCAATGGCATTGGCTGGAGAAGCTTCTGAGCTAATGA
AGCACTTCCAATGGTTGACT

Product: restriction endonuclease-like protein

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Restriction Endonuclease-Like Protein; Restriction Endonuclease; Hnh Endonuclease; Endonuclease-Like Protein; Endonuclease

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MIWAIYVSDKPHSRVNFPIGMSNGIWGVHESKKKTIKRIEANDYVVFVYSISWLKAEGTPPKGFSRVGKDKLDLFRGSVQ
KIIFGKVTRAYYQDEKEVWPDDTYPHRFNFEILERHDNGVMFGTEFYHSSFVEAVRYSACTQGSITEVNDIKNLTQLKGV
SSENVGDYGVDEGKPIYRVHKTRERDPKLTKDKKQQVLSITGKLCCEICNFDFYECYGDLGLGFAECHHLEPLALRESNK
KTKLDDLAILCANCHRMIHYPTQWLSVEELKEKYERQRNKSIDKSTERV

Sequences:

>Translated_289_residues
MIWAIYVSDKPHSRVNFPIGMSNGIWGVHESKKKTIKRIEANDYVVFVYSISWLKAEGTPPKGFSRVGKDKLDLFRGSVQ
KIIFGKVTRAYYQDEKEVWPDDTYPHRFNFEILERHDNGVMFGTEFYHSSFVEAVRYSACTQGSITEVNDIKNLTQLKGV
SSENVGDYGVDEGKPIYRVHKTRERDPKLTKDKKQQVLSITGKLCCEICNFDFYECYGDLGLGFAECHHLEPLALRESNK
KTKLDDLAILCANCHRMIHYPTQWLSVEELKEKYERQRNKSIDKSTERV
>Mature_289_residues
MIWAIYVSDKPHSRVNFPIGMSNGIWGVHESKKKTIKRIEANDYVVFVYSISWLKAEGTPPKGFSRVGKDKLDLFRGSVQ
KIIFGKVTRAYYQDEKEVWPDDTYPHRFNFEILERHDNGVMFGTEFYHSSFVEAVRYSACTQGSITEVNDIKNLTQLKGV
SSENVGDYGVDEGKPIYRVHKTRERDPKLTKDKKQQVLSITGKLCCEICNFDFYECYGDLGLGFAECHHLEPLALRESNK
KTKLDDLAILCANCHRMIHYPTQWLSVEELKEKYERQRNKSIDKSTERV

Specific function: Unknown

COG id: COG3183

COG function: function code V; Predicted restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33496; Mature: 33496

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIWAIYVSDKPHSRVNFPIGMSNGIWGVHESKKKTIKRIEANDYVVFVYSISWLKAEGTP
CEEEEEECCCCCCEEECCEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEEECCCCC
PKGFSRVGKDKLDLFRGSVQKIIFGKVTRAYYQDEKEVWPDDTYPHRFNFEILERHDNGV
CHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCEECHHEEEECCCCE
MFGTEFYHSSFVEAVRYSACTQGSITEVNDIKNLTQLKGVSSENVGDYGVDEGKPIYRVH
EEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEH
KTRERDPKLTKDKKQQVLSITGKLCCEICNFDFYECYGDLGLGFAECHHLEPLALRESNK
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHCCCCHHCCCCCC
KTKLDDLAILCANCHRMIHYPTQWLSVEELKEKYERQRNKSIDKSTERV
CCCHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHCCCCCHHHCCC
>Mature Secondary Structure
MIWAIYVSDKPHSRVNFPIGMSNGIWGVHESKKKTIKRIEANDYVVFVYSISWLKAEGTP
CEEEEEECCCCCCEEECCEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEEECCCCC
PKGFSRVGKDKLDLFRGSVQKIIFGKVTRAYYQDEKEVWPDDTYPHRFNFEILERHDNGV
CHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCEECHHEEEECCCCE
MFGTEFYHSSFVEAVRYSACTQGSITEVNDIKNLTQLKGVSSENVGDYGVDEGKPIYRVH
EEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEH
KTRERDPKLTKDKKQQVLSITGKLCCEICNFDFYECYGDLGLGFAECHHLEPLALRESNK
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHCCCCHHCCCCCC
KTKLDDLAILCANCHRMIHYPTQWLSVEELKEKYERQRNKSIDKSTERV
CCCHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA