| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
Click here to switch to the map view.
The map label for this gene is 167623700
Identifier: 167623700
GI number: 167623700
Start: 2122585
End: 2122833
Strand: Reverse
Name: 167623700
Synonym: Shal_1770
Alternate gene names: NA
Gene position: 2122833-2122585 (Counterclockwise)
Preceding gene: 167623701
Following gene: 167623697
Centisome position: 40.61
GC content: 42.17
Gene sequence:
>249_bases TTGTTTCATCAATTTGATAAACTAATAGAAGTAGGCCAAAACCATGACAGAAGAGTAACATTCGCCTCAATCTGTCATGC CGATAATGAGATGTTTAAACAGAAGCAAGCAAGGGGAGTTCAGGTGAGTCACTATCACTTAGCCTCTATCACCTTACACC TTATTCCCTTTACTCCAATAGATGATAACCACGAGTCTTATCCATGTGGTTCAGTCTCGGGAAGCCAAACCAAAGGCCGC TCTCCCTAA
Upstream 100 bases:
>100_bases CAACTTCTTATACTGATTGGTATAACTGGCGACATCTTTTTGAAACAGGAATATTTAGCCCATCATGATTACCTAACAGG CCGCGCCAAATTGGCGCGCC
Downstream 100 bases:
>100_bases CATTGCTAAGCGCTGGGTAGTAAATTGTAGAATTTAGGCTAATAGAACAAGCAGTTCTAACGGCTTATGAATAATGGCTT TAGGACTGGCTAACAGTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MFHQFDKLIEVGQNHDRRVTFASICHADNEMFKQKQARGVQVSHYHLASITLHLIPFTPIDDNHESYPCGSVSGSQTKGR SP
Sequences:
>Translated_82_residues MFHQFDKLIEVGQNHDRRVTFASICHADNEMFKQKQARGVQVSHYHLASITLHLIPFTPIDDNHESYPCGSVSGSQTKGR SP >Mature_82_residues MFHQFDKLIEVGQNHDRRVTFASICHADNEMFKQKQARGVQVSHYHLASITLHLIPFTPIDDNHESYPCGSVSGSQTKGR SP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9294; Mature: 9294
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHQFDKLIEVGQNHDRRVTFASICHADNEMFKQKQARGVQVSHYHLASITLHLIPFTPI CCCHHHHHHHHCCCCCCEEHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCC DDNHESYPCGSVSGSQTKGRSP CCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFHQFDKLIEVGQNHDRRVTFASICHADNEMFKQKQARGVQVSHYHLASITLHLIPFTPI CCCHHHHHHHHCCCCCCEEHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCC DDNHESYPCGSVSGSQTKGRSP CCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA