Click here to switch to the map view.

The map label for this gene is yafK [C]

Identifier: 167623553

GI number: 167623553

Start: 1947588

End: 1948097

Strand: Reverse

Name: yafK [C]

Synonym: Shal_1622

Alternate gene names: 167623553

Gene position: 1948097-1947588 (Counterclockwise)

Preceding gene: 167623556

Following gene: 167623552

Centisome position: 37.27

GC content: 49.02

Gene sequence:

>510_bases
ATGCGTTTTATTGTTTTGTCACTCAGTTTGCTAATGACTAGCATGCTTTTTTCGACGCTCACTTTCGCAAGCACTATGGC
CAACGGTAAAGCCGACTTAGTGATAGTCACCAAGTCTGAAGCAAGCATGACACTGCTGCGTCAAGGAAAGGTGTTTAAGA
AATATCGCATTGCCATGGGTGATAACCCTGTAGGCCACAAGCTGACCGAGGGCGACCAACGCACTCCCGAAGGACGTTAT
CTATTGGATTATAAAAAATCAGATAGTGCTTACTATCGCGCAATTCATATCTCCTACCCGAATGATGAAGACCGTCTGCG
CGCCGACGCTCTGGGGATCAGCCCTGGAGGGCAGATCATGATCCACGGTGAAAACCCTAACTCTAGCCTGAGCCCAGAAG
AAGCCCAGATGTATAATTGGACCGATGGTTGTATCGCGGTCACTAATGCCGAGATGGACGAGCTTTGGCGAGCGATTGAT
GAAGGCACTCCCATAGAGATCTGGCCCTAA

Upstream 100 bases:

>100_bases
CAAAAATAATCTTAGCCTTTAGCATCAACACTCACGCCATTTTAAGGTAATATGGCCCCCATAATTGACTCTTTTTTAGC
TTATTTGCTCAAGGTTTTTC

Downstream 100 bases:

>100_bases
GCGTTTTTCACTGTTCTATTCCCCCTAACTTTTTTCAATCAGAAATTAGCATCATTTTTATTTCATGCTCATTTTGCTTT
AAGGCACTCCGATGACATAC

Product: hypothetical protein

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG; Lipoprotein; ErfK/YbiS/YcfS/YnhG-Related Protein; ErfK/YbiS/YcfS/YnhG Protein; Peptidoglycan L D-Transpeptidase Lipoprotein; Protein ERFK

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MRFIVLSLSLLMTSMLFSTLTFASTMANGKADLVIVTKSEASMTLLRQGKVFKKYRIAMGDNPVGHKLTEGDQRTPEGRY
LLDYKKSDSAYYRAIHISYPNDEDRLRADALGISPGGQIMIHGENPNSSLSPEEAQMYNWTDGCIAVTNAEMDELWRAID
EGTPIEIWP

Sequences:

>Translated_169_residues
MRFIVLSLSLLMTSMLFSTLTFASTMANGKADLVIVTKSEASMTLLRQGKVFKKYRIAMGDNPVGHKLTEGDQRTPEGRY
LLDYKKSDSAYYRAIHISYPNDEDRLRADALGISPGGQIMIHGENPNSSLSPEEAQMYNWTDGCIAVTNAEMDELWRAID
EGTPIEIWP
>Mature_169_residues
MRFIVLSLSLLMTSMLFSTLTFASTMANGKADLVIVTKSEASMTLLRQGKVFKKYRIAMGDNPVGHKLTEGDQRTPEGRY
LLDYKKSDSAYYRAIHISYPNDEDRLRADALGISPGGQIMIHGENPNSSLSPEEAQMYNWTDGCIAVTNAEMDELWRAID
EGTPIEIWP

Specific function: Unknown

COG id: COG3034

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18912; Mature: 18912

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFIVLSLSLLMTSMLFSTLTFASTMANGKADLVIVTKSEASMTLLRQGKVFKKYRIAMG
CEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCCCEEEEEEEEC
DNPVGHKLTEGDQRTPEGRYLLDYKKSDSAYYRAIHISYPNDEDRLRADALGISPGGQIM
CCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCHHHEEEHEEECCCCCEEE
IHGENPNSSLSPEEAQMYNWTDGCIAVTNAEMDELWRAIDEGTPIEIWP
EECCCCCCCCCCCHHEEEECCCCEEEEECCCHHHHHHHHCCCCCEEECC
>Mature Secondary Structure
MRFIVLSLSLLMTSMLFSTLTFASTMANGKADLVIVTKSEASMTLLRQGKVFKKYRIAMG
CEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCCCEEEEEEEEC
DNPVGHKLTEGDQRTPEGRYLLDYKKSDSAYYRAIHISYPNDEDRLRADALGISPGGQIM
CCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCHHHEEEHEEECCCCCEEE
IHGENPNSSLSPEEAQMYNWTDGCIAVTNAEMDELWRAIDEGTPIEIWP
EECCCCCCCCCCCHHEEEECCCCEEEEECCCHHHHHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA