Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623549

Identifier: 167623549

GI number: 167623549

Start: 1944339

End: 1944719

Strand: Reverse

Name: 167623549

Synonym: Shal_1618

Alternate gene names: NA

Gene position: 1944719-1944339 (Counterclockwise)

Preceding gene: 167623552

Following gene: 167623545

Centisome position: 37.21

GC content: 44.62

Gene sequence:

>381_bases
ATGAATGCACTAAGACACGGTTTCTCTATCGGCATAGAGAGAGTGAGTGACGAGTTTTTCTTAACCTTAAAAGCCAAGGG
TAAACTTACCCACAGCGATTACCTTGCGATTACCCCTGTGATTGACTCGGCACTATCTGAGGTCAAGCAACCTAAGATTA
AAGCCTTATTCGATGCGACAGAGCTTGAAGGTTGGGAGCTTAGCGCCGCTTGGGATGACTTTAAGCTGGGGCTTAAGCAT
GGCAATCAATTTGTTAAAATCGCCCTATATGGTAATAAAGGCTGGCAAGAAACCGCCACAAAACTAGGGCGCTGGTTTGT
CGCAGGAGAAATCAAGTTTTTTGAGAATGAAGATGATGCGCTCACTTGGCTACATCAATAA

Upstream 100 bases:

>100_bases
ATCGATATCAATGCAGTTGTCTGGATTAGTTTTCATGGCGCGAGTGTGATCAAATCAACAAAGACTATATGAAGCGGGTT
ATCTAACAAGGAGAGTCTAT

Downstream 100 bases:

>100_bases
GCCCTCTAAAATAAGCCCTCTAACGCCTTGTTGCCTCATCTGTTGCTTTCTTTATTGCTTCCTCTACGGCAATAGGTAAG
CCAAAAAGACCAACGCCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MNALRHGFSIGIERVSDEFFLTLKAKGKLTHSDYLAITPVIDSALSEVKQPKIKALFDATELEGWELSAAWDDFKLGLKH
GNQFVKIALYGNKGWQETATKLGRWFVAGEIKFFENEDDALTWLHQ

Sequences:

>Translated_126_residues
MNALRHGFSIGIERVSDEFFLTLKAKGKLTHSDYLAITPVIDSALSEVKQPKIKALFDATELEGWELSAAWDDFKLGLKH
GNQFVKIALYGNKGWQETATKLGRWFVAGEIKFFENEDDALTWLHQ
>Mature_126_residues
MNALRHGFSIGIERVSDEFFLTLKAKGKLTHSDYLAITPVIDSALSEVKQPKIKALFDATELEGWELSAAWDDFKLGLKH
GNQFVKIALYGNKGWQETATKLGRWFVAGEIKFFENEDDALTWLHQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14300; Mature: 14300

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALRHGFSIGIERVSDEFFLTLKAKGKLTHSDYLAITPVIDSALSEVKQPKIKALFDAT
CCCHHHHHHHHHEECCCEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHCCCHHHEEECCC
ELEGWELSAAWDDFKLGLKHGNQFVKIALYGNKGWQETATKLGRWFVAGEIKFFENEDDA
CCCCEEEECCCCCCEECCCCCCEEEEEEEECCCCHHHHHHHHHCEEEEEEEEEEECCCCE
LTWLHQ
EEEECC
>Mature Secondary Structure
MNALRHGFSIGIERVSDEFFLTLKAKGKLTHSDYLAITPVIDSALSEVKQPKIKALFDAT
CCCHHHHHHHHHEECCCEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHCCCHHHEEECCC
ELEGWELSAAWDDFKLGLKHGNQFVKIALYGNKGWQETATKLGRWFVAGEIKFFENEDDA
CCCCEEEECCCCCCEECCCCCCEEEEEEEECCCCHHHHHHHHHCEEEEEEEEEEECCCCE
LTWLHQ
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA