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The map label for this gene is 167623333

Identifier: 167623333

GI number: 167623333

Start: 1693561

End: 1694793

Strand: Direct

Name: 167623333

Synonym: Shal_1402

Alternate gene names: NA

Gene position: 1693561-1694793 (Clockwise)

Preceding gene: 167623332

Following gene: 167623335

Centisome position: 32.4

GC content: 45.26

Gene sequence:

>1233_bases
ATGTCGCTAGCCAAATGTCATAAAACAGTATTGCTACTTGGTGGTAGTCGTGATCAGCTATTTTTGATCAAAACAGCAAA
TAATATGGGCTTACACACGGTCGTTGTCGATGCGAACCCTGCATCTCCAGGCTTTGCGATTGCCGATGATTATGCTGTTG
TCAGTACCATGGACTTAGAAGCCTTAAAAGCTTTTGTCGATGACTACCAAGAGCAGCAGCGAAAAATTGATGCAGTGTGC
GTTATGGGCAGCGATATATCACAATATGTCGCTCAGTTGGCTGAATATATTCGGGTGCCACATATTCCAATCGAAGCGGC
AATGATTACCACCAATAAGCTTAAGATGAAGCAATGTTTTGAGCGCCATGGTGTTGCAATTCCTTGGTTTTGCTTATTAG
AAAATACCGAGCATTTAGCGGATATAGCAGCTAAAAGAGGGCTACCGTTAATCATCAAGCCACTCGATCGTTCAGGTGCC
AGAGGTGTGTTTTTACTGACACAGGACTCGGATTTGTCAGCGCTTTATCACAAGGCGAAGAGTGAGTCTTTTGCTGGTGA
CGTTATGGTGGAGGAGTACCTTGCAGGGCCTCAGATCAGTACCGAAACCATCATGTATCGTGGGCAAGCTTATACACCTG
GTTATGTCGATCGTAATTACGAAATGTTAACTCGCTTTGCACCTAATATTATTGAGAATGGGGGGTGGCAGCCAAGTTTA
ATTCAAGGTGAAAAAAGAGCTAAGGTTGAAGCTTTGATTGAGCAAGCGGCTTTGGCTCTTGGCCTGACAGATGGCGTGAT
TAAAGGGGATATCGTTTATACCGATGTTGGCCCGAAAATTATTGAGGTTGCAACCCGTCTAAGCGGTGGTGATTTTTCTG
AAAGCCTGGTTCCTTTAGGTTTAGGGATTAATTACGTCGAAGCGGCGCTGAAAATAGCCTTGGGCGAGCCACCAGAGTTA
GAGAAGCTAACTCCAGTTATCGACCAAGCGGTAGCGAATCGTTACTTCTTTCCCAAGCCTGGAAAAGTCACGTCTATCTC
GGGAATTGAAGCTATTCAAGCTGAAGACTTTGTTAAGAAGCTTGAGATCTGGTATCAAGTGGGTGATGTCGTGCCTGAAA
CCACCAGTCACGCCAGTCGATTCGGAGTCTTTATCGTCACCGCCGATGATCGACAGCAACTGGAGCAGAGAATTAAATGG
GTGTATGACACCTTGAAGGTTACTACCGTATAG

Upstream 100 bases:

>100_bases
CATCACCAGTGCTTGTGTGATGCTGGCCTCTGATGAGCAGCAGTATATGACGGCTCAGGTACTCGCTGTGAGTGGCGGCG
CCATTTTAGGAGCTTAATGG

Downstream 100 bases:

>100_bases
CAATTAATAAAAAGCCCTTTTAAGCGTACTTAAAAGGGCTTTTTATTAGAGTCGAGATCCGTTTCGCTATAAGCGGTTAG
CCCTGAAAATTTTAATTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MSLAKCHKTVLLLGGSRDQLFLIKTANNMGLHTVVVDANPASPGFAIADDYAVVSTMDLEALKAFVDDYQEQQRKIDAVC
VMGSDISQYVAQLAEYIRVPHIPIEAAMITTNKLKMKQCFERHGVAIPWFCLLENTEHLADIAAKRGLPLIIKPLDRSGA
RGVFLLTQDSDLSALYHKAKSESFAGDVMVEEYLAGPQISTETIMYRGQAYTPGYVDRNYEMLTRFAPNIIENGGWQPSL
IQGEKRAKVEALIEQAALALGLTDGVIKGDIVYTDVGPKIIEVATRLSGGDFSESLVPLGLGINYVEAALKIALGEPPEL
EKLTPVIDQAVANRYFFPKPGKVTSISGIEAIQAEDFVKKLEIWYQVGDVVPETTSHASRFGVFIVTADDRQQLEQRIKW
VYDTLKVTTV

Sequences:

>Translated_410_residues
MSLAKCHKTVLLLGGSRDQLFLIKTANNMGLHTVVVDANPASPGFAIADDYAVVSTMDLEALKAFVDDYQEQQRKIDAVC
VMGSDISQYVAQLAEYIRVPHIPIEAAMITTNKLKMKQCFERHGVAIPWFCLLENTEHLADIAAKRGLPLIIKPLDRSGA
RGVFLLTQDSDLSALYHKAKSESFAGDVMVEEYLAGPQISTETIMYRGQAYTPGYVDRNYEMLTRFAPNIIENGGWQPSL
IQGEKRAKVEALIEQAALALGLTDGVIKGDIVYTDVGPKIIEVATRLSGGDFSESLVPLGLGINYVEAALKIALGEPPEL
EKLTPVIDQAVANRYFFPKPGKVTSISGIEAIQAEDFVKKLEIWYQVGDVVPETTSHASRFGVFIVTADDRQQLEQRIKW
VYDTLKVTTV
>Mature_409_residues
SLAKCHKTVLLLGGSRDQLFLIKTANNMGLHTVVVDANPASPGFAIADDYAVVSTMDLEALKAFVDDYQEQQRKIDAVCV
MGSDISQYVAQLAEYIRVPHIPIEAAMITTNKLKMKQCFERHGVAIPWFCLLENTEHLADIAAKRGLPLIIKPLDRSGAR
GVFLLTQDSDLSALYHKAKSESFAGDVMVEEYLAGPQISTETIMYRGQAYTPGYVDRNYEMLTRFAPNIIENGGWQPSLI
QGEKRAKVEALIEQAALALGLTDGVIKGDIVYTDVGPKIIEVATRLSGGDFSESLVPLGLGINYVEAALKIALGEPPELE
KLTPVIDQAVANRYFFPKPGKVTSISGIEAIQAEDFVKKLEIWYQVGDVVPETTSHASRFGVFIVTADDRQQLEQRIKWV
YDTLKVTTV

Specific function: Unknown

COG id: COG0439

COG function: function code I; Biotin carboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR005479 [H]

Pfam domain/function: PF02786 CPSase_L_D2 [H]

EC number: NA

Molecular weight: Translated: 45139; Mature: 45008

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLAKCHKTVLLLGGSRDQLFLIKTANNMGLHTVVVDANPASPGFAIADDYAVVSTMDLE
CCHHHHCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEECCCEEEECCCHH
ALKAFVDDYQEQQRKIDAVCVMGSDISQYVAQLAEYIRVPHIPIEAAMITTNKLKMKQCF
HHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHH
ERHGVAIPWFCLLENTEHLADIAAKRGLPLIIKPLDRSGARGVFLLTQDSDLSALYHKAK
HHCCCCCEEEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHC
SESFAGDVMVEEYLAGPQISTETIMYRGQAYTPGYVDRNYEMLTRFAPNIIENGGWQPSL
CCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHCCHHHHCCCCCCHH
IQGEKRAKVEALIEQAALALGLTDGVIKGDIVYTDVGPKIIEVATRLSGGDFSESLVPLG
HCCCHHHHHHHHHHHHHHHHCCCCCCEECCEEEECCCHHHHHHHHHCCCCCCCCCCEECC
LGINYVEAALKIALGEPPELEKLTPVIDQAVANRYFFPKPGKVTSISGIEAIQAEDFVKK
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHH
LEIWYQVGDVVPETTSHASRFGVFIVTADDRQQLEQRIKWVYDTLKVTTV
HHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure 
SLAKCHKTVLLLGGSRDQLFLIKTANNMGLHTVVVDANPASPGFAIADDYAVVSTMDLE
CHHHHCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEECCCEEEECCCHH
ALKAFVDDYQEQQRKIDAVCVMGSDISQYVAQLAEYIRVPHIPIEAAMITTNKLKMKQCF
HHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHH
ERHGVAIPWFCLLENTEHLADIAAKRGLPLIIKPLDRSGARGVFLLTQDSDLSALYHKAK
HHCCCCCEEEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHC
SESFAGDVMVEEYLAGPQISTETIMYRGQAYTPGYVDRNYEMLTRFAPNIIENGGWQPSL
CCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHCCHHHHCCCCCCHH
IQGEKRAKVEALIEQAALALGLTDGVIKGDIVYTDVGPKIIEVATRLSGGDFSESLVPLG
HCCCHHHHHHHHHHHHHHHHCCCCCCEECCEEEECCCHHHHHHHHHCCCCCCCCCCEECC
LGINYVEAALKIALGEPPELEKLTPVIDQAVANRYFFPKPGKVTSISGIEAIQAEDFVKK
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHH
LEIWYQVGDVVPETTSHASRFGVFIVTADDRQQLEQRIKWVYDTLKVTTV
HHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]