| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is guaB [H]
Identifier: 167623308
GI number: 167623308
Start: 1655008
End: 1656480
Strand: Direct
Name: guaB [H]
Synonym: Shal_1376
Alternate gene names: 167623308
Gene position: 1655008-1656480 (Clockwise)
Preceding gene: 167623305
Following gene: 167623309
Centisome position: 31.66
GC content: 45.96
Gene sequence:
>1473_bases ATGTTAAGATTGAAAAAAGAAGCGTTAACTTTTGATGATGTGTTGCTGGTTCCGGCACACTCTACCGTCCTCCCAAATAC AGCTGTTTTAAAAACACGCCTGACGAATAAGATTGAGTTGAATACTCCGATCGTTTCTGCTGCTATGGATACTGTTACTG AAGCTCGCTTGGCAATTGCTATTGCGCAAGAAGGTGGCTTAGGTTTTATCCATAAAAACATGACGATTGAGCAACAAGCT GAAGAAGTTCGCAAAGTAAAAATTTACGAAGCGGGCATCGTTCAGCAGCCAGTGACCGTGACTCCTACTACTACACTAGC CGATCTTAAGTTATTGACTGAGAAAAATGGTTTCGCAGGTTACCCTGTAGTAAACGAAGCTAACGAATTAGTGGGTATCA TTACTGGTCGTGACGTACGCTTTATCACTGACTGGTCTCGTACGGTTGACCAAGTGATGACACCTAAAGAGCGCCTAGTG ACAGTTCTAGAAGGGACTAAACTGGATGAAGTTCAAAAGCTGATGCATTCTCACCGTGTTGAGAAAGTTTTGGTTGTTGA TGATAACTTCAAGCTTAAAGGCCTTATCACAGTAAAAGATTTCCAAAAAGCTGAGCGTAAGCCAAACGCATGTAAAGACG AGTTAGGTCGTTTACGTGTTGGCGCTGCTGTTGGTGCGGGCCCGGGTAACGAAGCGCGTGTTGACGCACTGGTACTCGCT GGTGTTGATATCTTGCTTATTGACTCATCACACGGACATTCAGAAGGCGTTTTACAACGTATTCGTGATACGCGTGCTAA ATATCCTGACTTACAGATTGTGGGCGGTAACGTCGCGACGGCTGAAGGTGCAATCGCACTGGTTGAAGCGGGCGTAAACG CAGTTAAAGTGGGTATTGGTCCTGGCTCTATCTGTACGACTCGTATCGTAACAGGTGTGGGTGTACCACAAATTACAGCA GTATCTGATGCTGCTGCTGCGGTTAAACACCTTGATATCCCAGTGATTGCCGATGGCGGTATTCGTTTCTCTGGTGACCT AGCTAAAGCATTAGCAGCGGGTGCATCATGCATCATGGCGGGTTCTATGTTTGCTGGTACTGAAGAAGCTCCGGGTGAAA CTGAGCTATATAACGGCCGCGCTTATAAGTCATACCGTGGTATGGGTTCACTAGGTGCAATGACACAGACTCAAGGTTCG TCTGACCGTTATTTCCAAAGTGATAACGCTGCAGACAAGCTAGTACCTGAAGGTATTGAAGGTCGTGTTGCTTACAAAGG TAAGCTAAAAGAGATCATTCACCAGCACATGGGCGGTTTACGTTCATGCATGGGCCTAACGGGTTGTGCAACCATTAAAG AGCTAAACGAGAAAGCGGAATTTGTTAAAATCACTGCAGCGGGTATGGGCGAGTCTCATGTTCACGACGTGACTATCAGC AAAGAAGCGCCTAACTATAGCCCTCGTTCTTAA
Upstream 100 bases:
>100_bases CGAATTAATGTCTATTTTCCATTTACCAACCCATATATGCAAGGTATAATCTCGCCGCAATATTTCACCTCTAATTCCTA ATCTCTTGGGGAGATGTTGC
Downstream 100 bases:
>100_bases TTAGAGTTTTTAGATATTAAAGGCGACAGATAAAGTCGCCTTTAAATTAAGCCAAGTAGAAGGTTCGCAGAGTACTCACT GCTTGGTTAGTTAACAATGA
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MLRLKKEALTFDDVLLVPAHSTVLPNTAVLKTRLTNKIELNTPIVSAAMDTVTEARLAIAIAQEGGLGFIHKNMTIEQQA EEVRKVKIYEAGIVQQPVTVTPTTTLADLKLLTEKNGFAGYPVVNEANELVGIITGRDVRFITDWSRTVDQVMTPKERLV TVLEGTKLDEVQKLMHSHRVEKVLVVDDNFKLKGLITVKDFQKAERKPNACKDELGRLRVGAAVGAGPGNEARVDALVLA GVDILLIDSSHGHSEGVLQRIRDTRAKYPDLQIVGGNVATAEGAIALVEAGVNAVKVGIGPGSICTTRIVTGVGVPQITA VSDAAAAVKHLDIPVIADGGIRFSGDLAKALAAGASCIMAGSMFAGTEEAPGETELYNGRAYKSYRGMGSLGAMTQTQGS SDRYFQSDNAADKLVPEGIEGRVAYKGKLKEIIHQHMGGLRSCMGLTGCATIKELNEKAEFVKITAAGMGESHVHDVTIS KEAPNYSPRS
Sequences:
>Translated_490_residues MLRLKKEALTFDDVLLVPAHSTVLPNTAVLKTRLTNKIELNTPIVSAAMDTVTEARLAIAIAQEGGLGFIHKNMTIEQQA EEVRKVKIYEAGIVQQPVTVTPTTTLADLKLLTEKNGFAGYPVVNEANELVGIITGRDVRFITDWSRTVDQVMTPKERLV TVLEGTKLDEVQKLMHSHRVEKVLVVDDNFKLKGLITVKDFQKAERKPNACKDELGRLRVGAAVGAGPGNEARVDALVLA GVDILLIDSSHGHSEGVLQRIRDTRAKYPDLQIVGGNVATAEGAIALVEAGVNAVKVGIGPGSICTTRIVTGVGVPQITA VSDAAAAVKHLDIPVIADGGIRFSGDLAKALAAGASCIMAGSMFAGTEEAPGETELYNGRAYKSYRGMGSLGAMTQTQGS SDRYFQSDNAADKLVPEGIEGRVAYKGKLKEIIHQHMGGLRSCMGLTGCATIKELNEKAEFVKITAAGMGESHVHDVTIS KEAPNYSPRS >Mature_490_residues MLRLKKEALTFDDVLLVPAHSTVLPNTAVLKTRLTNKIELNTPIVSAAMDTVTEARLAIAIAQEGGLGFIHKNMTIEQQA EEVRKVKIYEAGIVQQPVTVTPTTTLADLKLLTEKNGFAGYPVVNEANELVGIITGRDVRFITDWSRTVDQVMTPKERLV TVLEGTKLDEVQKLMHSHRVEKVLVVDDNFKLKGLITVKDFQKAERKPNACKDELGRLRVGAAVGAGPGNEARVDALVLA GVDILLIDSSHGHSEGVLQRIRDTRAKYPDLQIVGGNVATAEGAIALVEAGVNAVKVGIGPGSICTTRIVTGVGVPQITA VSDAAAAVKHLDIPVIADGGIRFSGDLAKALAAGASCIMAGSMFAGTEEAPGETELYNGRAYKSYRGMGSLGAMTQTQGS SDRYFQSDNAADKLVPEGIEGRVAYKGKLKEIIHQHMGGLRSCMGLTGCATIKELNEKAEFVKITAAGMGESHVHDVTIS KEAPNYSPRS
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI66933016, Length=482, Percent_Identity=39.8340248962656, Blast_Score=329, Evalue=4e-90, Organism=Homo sapiens, GI34328930, Length=480, Percent_Identity=39.1666666666667, Blast_Score=326, Evalue=3e-89, Organism=Homo sapiens, GI217035146, Length=480, Percent_Identity=39.1666666666667, Blast_Score=326, Evalue=3e-89, Organism=Homo sapiens, GI34328928, Length=480, Percent_Identity=39.1666666666667, Blast_Score=326, Evalue=4e-89, Organism=Homo sapiens, GI156616279, Length=480, Percent_Identity=39.1666666666667, Blast_Score=325, Evalue=5e-89, Organism=Homo sapiens, GI217035152, Length=486, Percent_Identity=38.8888888888889, Blast_Score=320, Evalue=1e-87, Organism=Homo sapiens, GI217035148, Length=480, Percent_Identity=38.125, Blast_Score=311, Evalue=9e-85, Organism=Homo sapiens, GI217035150, Length=480, Percent_Identity=35.625, Blast_Score=283, Evalue=3e-76, Organism=Homo sapiens, GI156104880, Length=248, Percent_Identity=37.9032258064516, Blast_Score=161, Evalue=2e-39, Organism=Homo sapiens, GI50541956, Length=249, Percent_Identity=36.144578313253, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI50541954, Length=249, Percent_Identity=36.5461847389558, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI50541952, Length=249, Percent_Identity=36.5461847389558, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI50541948, Length=249, Percent_Identity=36.5461847389558, Blast_Score=156, Evalue=3e-38, Organism=Escherichia coli, GI1788855, Length=486, Percent_Identity=79.0123456790123, Blast_Score=723, Evalue=0.0, Organism=Escherichia coli, GI1786293, Length=223, Percent_Identity=35.8744394618834, Blast_Score=140, Evalue=2e-34, Organism=Caenorhabditis elegans, GI71994385, Length=477, Percent_Identity=36.0587002096436, Blast_Score=269, Evalue=3e-72, Organism=Caenorhabditis elegans, GI71994389, Length=422, Percent_Identity=38.3886255924171, Blast_Score=259, Evalue=3e-69, Organism=Caenorhabditis elegans, GI17560440, Length=276, Percent_Identity=33.695652173913, Blast_Score=157, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6323585, Length=483, Percent_Identity=39.7515527950311, Blast_Score=340, Evalue=3e-94, Organism=Saccharomyces cerevisiae, GI6323464, Length=482, Percent_Identity=39.8340248962656, Blast_Score=322, Evalue=8e-89, Organism=Saccharomyces cerevisiae, GI6322012, Length=482, Percent_Identity=37.9668049792531, Blast_Score=321, Evalue=2e-88, Organism=Saccharomyces cerevisiae, GI6319352, Length=338, Percent_Identity=38.7573964497041, Blast_Score=241, Evalue=2e-64, Organism=Saccharomyces cerevisiae, GI6319353, Length=122, Percent_Identity=38.5245901639344, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI24641071, Length=483, Percent_Identity=38.9233954451346, Blast_Score=310, Evalue=1e-84, Organism=Drosophila melanogaster, GI24641073, Length=483, Percent_Identity=38.9233954451346, Blast_Score=310, Evalue=1e-84, Organism=Drosophila melanogaster, GI28571163, Length=441, Percent_Identity=39.6825396825397, Blast_Score=283, Evalue=1e-76,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 52211; Mature: 52211
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLKKEALTFDDVLLVPAHSTVLPNTAVLKTRLTNKIELNTPIVSAAMDTVTEARLAIA CCEECCHHCCCCCEEEEECCCCCCCCHHHHHHHCCCEEEECCCHHHHHHHHHHHCEEEEE IAQEGGLGFIHKNMTIEQQAEEVRKVKIYEAGIVQQPVTVTPTTTLADLKLLTEKNGFAG EECCCCEEEEECCCCHHHHHHHHHEEEEEECCCCCCCEEECCCCHHHHEEEEECCCCCCC YPVVNEANELVGIITGRDVRFITDWSRTVDQVMTPKERLVTVLEGTKLDEVQKLMHSHRV CCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCC EKVLVVDDNFKLKGLITVKDFQKAERKPNACKDELGRLRVGAAVGAGPGNEARVDALVLA CEEEEECCCEEEEEEEEEHHHHHHHCCCCHHHHHHCCEEECEEECCCCCCCHHEEEEEEE GVDILLIDSSHGHSEGVLQRIRDTRAKYPDLQIVGGNVATAEGAIALVEAGVNAVKVGIG CCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCEEECCCCEEEEECCCCEEEEECC PGSICTTRIVTGVGVPQITAVSDAAAAVKHLDIPVIADGGIRFSGDLAKALAAGASCIMA CCCHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCEEEECCCEEECHHHHHHHHCCCHHEEE GSMFAGTEEAPGETELYNGRAYKSYRGMGSLGAMTQTQGSSDRYFQSDNAADKLVPEGIE CCCCCCCCCCCCCCEEECCCCCHHHCCCCCCCCCCCCCCCCCCEECCCCCHHHCCCCCCC GRVAYKGKLKEIIHQHMGGLRSCMGLTGCATIKELNEKAEFVKITAAGMGESHVHDVTIS CEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEE KEAPNYSPRS CCCCCCCCCC >Mature Secondary Structure MLRLKKEALTFDDVLLVPAHSTVLPNTAVLKTRLTNKIELNTPIVSAAMDTVTEARLAIA CCEECCHHCCCCCEEEEECCCCCCCCHHHHHHHCCCEEEECCCHHHHHHHHHHHCEEEEE IAQEGGLGFIHKNMTIEQQAEEVRKVKIYEAGIVQQPVTVTPTTTLADLKLLTEKNGFAG EECCCCEEEEECCCCHHHHHHHHHEEEEEECCCCCCCEEECCCCHHHHEEEEECCCCCCC YPVVNEANELVGIITGRDVRFITDWSRTVDQVMTPKERLVTVLEGTKLDEVQKLMHSHRV CCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCC EKVLVVDDNFKLKGLITVKDFQKAERKPNACKDELGRLRVGAAVGAGPGNEARVDALVLA CEEEEECCCEEEEEEEEEHHHHHHHCCCCHHHHHHCCEEECEEECCCCCCCHHEEEEEEE GVDILLIDSSHGHSEGVLQRIRDTRAKYPDLQIVGGNVATAEGAIALVEAGVNAVKVGIG CCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCEEECCCCEEEEECCCCEEEEECC PGSICTTRIVTGVGVPQITAVSDAAAAVKHLDIPVIADGGIRFSGDLAKALAAGASCIMA CCCHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCEEEECCCEEECHHHHHHHHCCCHHEEE GSMFAGTEEAPGETELYNGRAYKSYRGMGSLGAMTQTQGSSDRYFQSDNAADKLVPEGIE CCCCCCCCCCCCCCEEECCCCCHHHCCCCCCCCCCCCCCCCCCEECCCCCHHHCCCCCCC GRVAYKGKLKEIIHQHMGGLRSCMGLTGCATIKELNEKAEFVKITAAGMGESHVHDVTIS CEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEE KEAPNYSPRS CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]