| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is yafP [C]
Identifier: 167623292
GI number: 167623292
Start: 1634543
End: 1635052
Strand: Direct
Name: yafP [C]
Synonym: Shal_1360
Alternate gene names: 167623292
Gene position: 1634543-1635052 (Clockwise)
Preceding gene: 167623291
Following gene: 167623293
Centisome position: 31.27
GC content: 44.71
Gene sequence:
>510_bases ATGCTGAAACTCATCCCTTATCGAAAAGAATATGCTGCCGAGGTGTCTGTGGTCGCGCACATCGCTATCAACCAGATAAG TGATGATGTTTATAGTGCCGAGGAAAGAACGGCTTGGTCGTTTGCGCCACGTTCGAGTTATCACTGGCATAAGCGTCTGT CGCGGTCTCAAACATGGTTAATGATTGACGAACAACGGTTAGCGTCGGGTCGTGCTTTTTGCTGTGGCTTTATCAACCTA GAAACTGACTTTAACAGCCGTGGCTATATCGATAGCCTTTATGTACATCCAGATTATCAAGGACGAGGTGTAGCAAAGCG ACTCTATAGCGCATTAGCCTTATGGGCAATTGAGCATGAGTATGATGAATTATTTGTCGATGCATCAAAACTGTCTAAGT CGTTATTTGCGTCTATGGGGTTTAAGCTTCGTCATCGCAGTTATCAAGAGAAGCGCGGCGTTGTGATCATGGGGTATTAC ATGAGCAAGGTGTTAAAATCTGCCATATAA
Upstream 100 bases:
>100_bases GTCTACGCCATTTTATTTTGTGTCAAACTGCCGCACAATATGGGCTGTAATGCCATATCACCTGCAACCCTCTATCGCCT AAAGTAAGTGAACATGATTA
Downstream 100 bases:
>100_bases CAAATCCTCTAAAGTAAGCCACTAAAGCTCGCAACCAAATTGAGTTAGGTAAGCCAGCATAGCAGCATAGAAACATAGAA GGACTTAAAAGATGACAACA
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; GNAT Family Acetyltransferase; Acetyltransferase Gnat Family; GCN5-Like N-Acetyltransferase; Histone Acetyltransferase HPA2-Like Acetyltransferase; Acetyltransferase YafP
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MLKLIPYRKEYAAEVSVVAHIAINQISDDVYSAEERTAWSFAPRSSYHWHKRLSRSQTWLMIDEQRLASGRAFCCGFINL ETDFNSRGYIDSLYVHPDYQGRGVAKRLYSALALWAIEHEYDELFVDASKLSKSLFASMGFKLRHRSYQEKRGVVIMGYY MSKVLKSAI
Sequences:
>Translated_169_residues MLKLIPYRKEYAAEVSVVAHIAINQISDDVYSAEERTAWSFAPRSSYHWHKRLSRSQTWLMIDEQRLASGRAFCCGFINL ETDFNSRGYIDSLYVHPDYQGRGVAKRLYSALALWAIEHEYDELFVDASKLSKSLFASMGFKLRHRSYQEKRGVVIMGYY MSKVLKSAI >Mature_169_residues MLKLIPYRKEYAAEVSVVAHIAINQISDDVYSAEERTAWSFAPRSSYHWHKRLSRSQTWLMIDEQRLASGRAFCCGFINL ETDFNSRGYIDSLYVHPDYQGRGVAKRLYSALALWAIEHEYDELFVDASKLSKSLFASMGFKLRHRSYQEKRGVVIMGYY MSKVLKSAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 19607; Mature: 19607
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKLIPYRKEYAAEVSVVAHIAINQISDDVYSAEERTAWSFAPRSSYHWHKRLSRSQTWL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHCCCCEEE MIDEQRLASGRAFCCGFINLETDFNSRGYIDSLYVHPDYQGRGVAKRLYSALALWAIEHE EEEHHHHHCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH YDELFVDASKLSKSLFASMGFKLRHRSYQEKRGVVIMGYYMSKVLKSAI HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEHHHHHHHHHHCC >Mature Secondary Structure MLKLIPYRKEYAAEVSVVAHIAINQISDDVYSAEERTAWSFAPRSSYHWHKRLSRSQTWL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHCCCCEEE MIDEQRLASGRAFCCGFINLETDFNSRGYIDSLYVHPDYQGRGVAKRLYSALALWAIEHE EEEHHHHHCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH YDELFVDASKLSKSLFASMGFKLRHRSYQEKRGVVIMGYYMSKVLKSAI HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA