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The map label for this gene is yfjF [C]

Identifier: 167623279

GI number: 167623279

Start: 1621431

End: 1621763

Strand: Direct

Name: yfjF [C]

Synonym: Shal_1347

Alternate gene names: 167623279

Gene position: 1621431-1621763 (Clockwise)

Preceding gene: 167623278

Following gene: 167623281

Centisome position: 31.02

GC content: 42.94

Gene sequence:

>333_bases
ATGAGCAGTGAACAAACACCATTTTTAGTCGAAGTGATTTACGCGCTACCAAAGCAGCAAAAGCTGATTAAGCTTCAGAT
CCCACCGGGGACGACGTGCATCGATGCTGTCAAATTGAGTGATATGCAGAATTACTTTCCTGAAATAGATCTAGAAACAG
TAAAACTAGGTATTTTTAGTCGCTTAGTAAAGCATGATGAAGTGTTGCTGCCTGGTCAGCGAGTTGAGATTTACCGGCCA
TTAATCGCAGATCCTAAAGATGTGCGCCGTAAGCGTGTCGAAAAAGCGAAAGATGAAGGCCGAGTCAATAAAAAGACCGG
TAGCAAGCTTTAA

Upstream 100 bases:

>100_bases
TCTCAAGCTCGATTGCCGACATAGCTTTCGGTAAAGTCTTTAAAGAACTGATGGGATCCATGGTGACGGCATTTACCAGT
CGCGCAAAGGTGATATACAA

Downstream 100 bases:

>100_bases
TAAATCGACAGTAAGATTTAGCAAATAAGATGTATAAAAAATGGCGAGTCTCCAATAGGAACTCGCCATTTTATTTGAGT
TAATCTGTTTAAAGTCAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MSSEQTPFLVEVIYALPKQQKLIKLQIPPGTTCIDAVKLSDMQNYFPEIDLETVKLGIFSRLVKHDEVLLPGQRVEIYRP
LIADPKDVRRKRVEKAKDEGRVNKKTGSKL

Sequences:

>Translated_110_residues
MSSEQTPFLVEVIYALPKQQKLIKLQIPPGTTCIDAVKLSDMQNYFPEIDLETVKLGIFSRLVKHDEVLLPGQRVEIYRP
LIADPKDVRRKRVEKAKDEGRVNKKTGSKL
>Mature_109_residues
SSEQTPFLVEVIYALPKQQKLIKLQIPPGTTCIDAVKLSDMQNYFPEIDLETVKLGIFSRLVKHDEVLLPGQRVEIYRPL
IADPKDVRRKRVEKAKDEGRVNKKTGSKL

Specific function: Unknown

COG id: COG2914

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0125 (rnfH) family [H]

Homologues:

Organism=Escherichia coli, GI87082139, Length=89, Percent_Identity=46.0674157303371, Blast_Score=80, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005346 [H]

Pfam domain/function: PF03658 UPF0125 [H]

EC number: NA

Molecular weight: Translated: 12589; Mature: 12458

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSEQTPFLVEVIYALPKQQKLIKLQIPPGTTCIDAVKLSDMQNYFPEIDLETVKLGIFS
CCCCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RLVKHDEVLLPGQRVEIYRPLIADPKDVRRKRVEKAKDEGRVNKKTGSKL
HHHHCCCEECCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SSEQTPFLVEVIYALPKQQKLIKLQIPPGTTCIDAVKLSDMQNYFPEIDLETVKLGIFS
CCCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RLVKHDEVLLPGQRVEIYRPLIADPKDVRRKRVEKAKDEGRVNKKTGSKL
HHHHCCCEECCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]