Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623271

Identifier: 167623271

GI number: 167623271

Start: 1613041

End: 1613703

Strand: Direct

Name: 167623271

Synonym: Shal_1338

Alternate gene names: NA

Gene position: 1613041-1613703 (Clockwise)

Preceding gene: 167623270

Following gene: 167623272

Centisome position: 30.86

GC content: 48.42

Gene sequence:

>663_bases
ATGATGCGACTAGACAAAATCAATTGGCACAGCCTAACCAAAATGCCGTACTGGTTGGCGCGGCCAGCCAGCGAGATAGA
CAAACTACGCCAAGGTGCGGTGTTGTTTTGGCAACGCTTTGCCGACTTGCTGGCGTTCCCGTCTAAGCAACTCGACCCCA
TGACCGCCGAATTAGCCTTAGTGCATTTGTTAGCGTGGGAACGAGACATTGAACAAATACCAGGTGAAACCGAGCAGCTT
TATAGAACGCGAGTAAAGTTCGCCCTTAAATTTGCCAAAGGCGCAGGGAGCAAAGAGGGCTGGTATTACATGTTTGAAAA
GCTGGGCACGCCATGGATCACCATTGATGAACGAGTGAGTGATACCGATTGGGATGTGGTGAGTTTGCAGCTACTCGACA
GTGACTTAGCAGAAAGAGCAGGTTTAATTGACAACATTTGTCGCCAGTATGGCCGCACAACAAGACGTTACCAGTTTGAC
ACCATTGCTAGCATGCCGCTTGTGGCGCCACCGTCAGACTTTTCTTTAGACAGCTTAACCGGAATTGCCAGCCTAAGCGA
TGACATGCGCCCAGCGCTTGGATTAGCGCTAATGGATAACGAATCACATTTTACGGTTACCAACAAAATGACCGTTCAAA
AACAGCTCATTAGTAAGAGATAA

Upstream 100 bases:

>100_bases
TGCAGGGCTTGAGTCATTGAACTGGCACCAAATGGATATTACCAGCGGTAACGATGTGCCTCGTATTGGCGAGTTAACCA
TTGATAACGGTAATGCGTAA

Downstream 100 bases:

>100_bases
GGAAACAACATGGCTTCAGTTATTACAATCGCAGGTGAAAAACTCTTTGCAGCTAAAGCACAAGCTAATGAGCAGCTAGA
CATTGACACCTTTATTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Phage-Like Protein; Bacteriophage Protein; Hemolysins-Like Protein Containing CBS Domains

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MMRLDKINWHSLTKMPYWLARPASEIDKLRQGAVLFWQRFADLLAFPSKQLDPMTAELALVHLLAWERDIEQIPGETEQL
YRTRVKFALKFAKGAGSKEGWYYMFEKLGTPWITIDERVSDTDWDVVSLQLLDSDLAERAGLIDNICRQYGRTTRRYQFD
TIASMPLVAPPSDFSLDSLTGIASLSDDMRPALGLALMDNESHFTVTNKMTVQKQLISKR

Sequences:

>Translated_220_residues
MMRLDKINWHSLTKMPYWLARPASEIDKLRQGAVLFWQRFADLLAFPSKQLDPMTAELALVHLLAWERDIEQIPGETEQL
YRTRVKFALKFAKGAGSKEGWYYMFEKLGTPWITIDERVSDTDWDVVSLQLLDSDLAERAGLIDNICRQYGRTTRRYQFD
TIASMPLVAPPSDFSLDSLTGIASLSDDMRPALGLALMDNESHFTVTNKMTVQKQLISKR
>Mature_220_residues
MMRLDKINWHSLTKMPYWLARPASEIDKLRQGAVLFWQRFADLLAFPSKQLDPMTAELALVHLLAWERDIEQIPGETEQL
YRTRVKFALKFAKGAGSKEGWYYMFEKLGTPWITIDERVSDTDWDVVSLQLLDSDLAERAGLIDNICRQYGRTTRRYQFD
TIASMPLVAPPSDFSLDSLTGIASLSDDMRPALGLALMDNESHFTVTNKMTVQKQLISKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25279; Mature: 25279

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRLDKINWHSLTKMPYWLARPASEIDKLRQGAVLFWQRFADLLAFPSKQLDPMTAELAL
CCCCCCCCHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
VHLLAWERDIEQIPGETEQLYRTRVKFALKFAKGAGSKEGWYYMFEKLGTPWITIDERVS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEECCCCC
DTDWDVVSLQLLDSDLAERAGLIDNICRQYGRTTRRYQFDTIASMPLVAPPSDFSLDSLT
CCCCCEEHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEHHHHHCCCCCCCCCCCCHHHHH
GIASLSDDMRPALGLALMDNESHFTVTNKMTVQKQLISKR
HHHHHCHHHHHHHCEEEECCCCCEEEECHHHHHHHHHHCC
>Mature Secondary Structure
MMRLDKINWHSLTKMPYWLARPASEIDKLRQGAVLFWQRFADLLAFPSKQLDPMTAELAL
CCCCCCCCHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
VHLLAWERDIEQIPGETEQLYRTRVKFALKFAKGAGSKEGWYYMFEKLGTPWITIDERVS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEECCCCC
DTDWDVVSLQLLDSDLAERAGLIDNICRQYGRTTRRYQFDTIASMPLVAPPSDFSLDSLT
CCCCCEEHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEHHHHHCCCCCCCCCCCCHHHHH
GIASLSDDMRPALGLALMDNESHFTVTNKMTVQKQLISKR
HHHHHCHHHHHHHCEEEECCCCCEEEECHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA