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The map label for this gene is 167623257

Identifier: 167623257

GI number: 167623257

Start: 1603829

End: 1604503

Strand: Direct

Name: 167623257

Synonym: Shal_1324

Alternate gene names: NA

Gene position: 1603829-1604503 (Clockwise)

Preceding gene: 167623256

Following gene: 167623258

Centisome position: 30.68

GC content: 47.7

Gene sequence:

>675_bases
TTGCAACTTATCGAACTTGAGGACGACTTAAAACGCCTCAAGGGCTTGGTAAGGCGGGCAGACAAAGTTGCCCATAAACG
TGACGTGTTACTGCCTAAGTGGTTACCCATTGTCACCGAGTACTTAGAAACAGTAGCAACGCTACAAAGCGTCAAGGAGA
ACGACAAAAATGCTATTTCTGACAATCCTATTTTTGCTTATTGCGTGGTTTGGCTATTCGACGTTGACGATCTCGGCCAA
GGCATTGAACTCGGCCTCAAAGCCATTGAGCTTAACCAACCTATGGTGCGCACTATTCGCCGCCAATGGGCAGGGTTTAT
TAGCGATGCTGTATTCGACTGGTGTGAGATTCAAGCAGATAACGGCCACAGCATTGAGCCGTATTTCAGCCAGGTGTTTA
AGCATGTTGCGAATAGTTGGAAATTACCGGAAGTGGTTACCGCCAAGTATTACAAATTCGCTGGTTTGGCGTTACTGCGC
ACAACGAACGGCGAGGTTAAGCCAACGCAAGTGGGCGACATTGACCGCTTACAGCAAGCAGATGCGTTATTGGAAAAAGC
CGCCAGCCTGCATAAGCATGCCCAGGTAAAAACCATACGCAACAAGATTGAAATGAGAATACGTGCACTTGAAGCCTATG
GCTCACAAGAGAGCGGTTCGCAAGAGCCTAGTTAA

Upstream 100 bases:

>100_bases
CGGAGCTAGCATCCTCGCCTGGCGAGAAAGACGCCAAAGCCAAAAGCAGCTCGAAAAAGTAGGTCTGACAGGTGACGCGC
AATATGCGCCAAGCCTGCAC

Downstream 100 bases:

>100_bases
AAGTGCAAAGGACCGACTCCCAACCCTCCAGTGCGCTAGCCGAGTGTTTAACGGGTGACTGTTAATAACCACGTCGACGC
TAACCGCACTGAACCTAATT

Product: small terminase subunit

Products: NA

Alternate protein names: Phage Terminase Subunit; Terminase Endonuclease Subunit; Phage Terminase Endonuclease Subunit; Terminase Endonuclease Subunit Bacteriophage Origin; Phage Small Terminase Subunit; Phage Gene

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MQLIELEDDLKRLKGLVRRADKVAHKRDVLLPKWLPIVTEYLETVATLQSVKENDKNAISDNPIFAYCVVWLFDVDDLGQ
GIELGLKAIELNQPMVRTIRRQWAGFISDAVFDWCEIQADNGHSIEPYFSQVFKHVANSWKLPEVVTAKYYKFAGLALLR
TTNGEVKPTQVGDIDRLQQADALLEKAASLHKHAQVKTIRNKIEMRIRALEAYGSQESGSQEPS

Sequences:

>Translated_224_residues
MQLIELEDDLKRLKGLVRRADKVAHKRDVLLPKWLPIVTEYLETVATLQSVKENDKNAISDNPIFAYCVVWLFDVDDLGQ
GIELGLKAIELNQPMVRTIRRQWAGFISDAVFDWCEIQADNGHSIEPYFSQVFKHVANSWKLPEVVTAKYYKFAGLALLR
TTNGEVKPTQVGDIDRLQQADALLEKAASLHKHAQVKTIRNKIEMRIRALEAYGSQESGSQEPS
>Mature_224_residues
MQLIELEDDLKRLKGLVRRADKVAHKRDVLLPKWLPIVTEYLETVATLQSVKENDKNAISDNPIFAYCVVWLFDVDDLGQ
GIELGLKAIELNQPMVRTIRRQWAGFISDAVFDWCEIQADNGHSIEPYFSQVFKHVANSWKLPEVVTAKYYKFAGLALLR
TTNGEVKPTQVGDIDRLQQADALLEKAASLHKHAQVKTIRNKIEMRIRALEAYGSQESGSQEPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25446; Mature: 25446

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLIELEDDLKRLKGLVRRADKVAHKRDVLLPKWLPIVTEYLETVATLQSVKENDKNAIS
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DNPIFAYCVVWLFDVDDLGQGIELGLKAIELNQPMVRTIRRQWAGFISDAVFDWCEIQAD
CCCHHHHHHHHHHCHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECC
NGHSIEPYFSQVFKHVANSWKLPEVVTAKYYKFAGLALLRTTNGEVKPTQVGDIDRLQQA
CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHH
DALLEKAASLHKHAQVKTIRNKIEMRIRALEAYGSQESGSQEPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MQLIELEDDLKRLKGLVRRADKVAHKRDVLLPKWLPIVTEYLETVATLQSVKENDKNAIS
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DNPIFAYCVVWLFDVDDLGQGIELGLKAIELNQPMVRTIRRQWAGFISDAVFDWCEIQAD
CCCHHHHHHHHHHCHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECC
NGHSIEPYFSQVFKHVANSWKLPEVVTAKYYKFAGLALLRTTNGEVKPTQVGDIDRLQQA
CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHH
DALLEKAASLHKHAQVKTIRNKIEMRIRALEAYGSQESGSQEPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA