| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167623248
Identifier: 167623248
GI number: 167623248
Start: 1595898
End: 1596284
Strand: Direct
Name: 167623248
Synonym: Shal_1315
Alternate gene names: NA
Gene position: 1595898-1596284 (Clockwise)
Preceding gene: 167623247
Following gene: 167623250
Centisome position: 30.53
GC content: 41.6
Gene sequence:
>387_bases GTGAGGCACCGCAGTTGGTGTGAAACTCTAGTCGTACAAATTAAACTCTATGTAGAAGAAACTGAAATGACAAAATTTAA ATGTGAAAGTAAATTTGGTGGGTTTAGCGCTGGTTATGTCTATGAAATAATCGATGGTGAGAAAGTCATTAAGGGCTATA TCGTAATTGATGGCTCAGGAAAAGTTGTTAAAAAGGGGTTTAAATCATTAGGTGACGCTGTTCAATGGGCTAAAGCTGAG TATGAGGCGTTGCGGAAGAGCTTTGAGTTAGCAATACAGCTGGAACAATTGAGTCAAGCACTTGAGGTGGAACCAGAACC AGAACCAGAACCCCAATCACCTGTAAGAAAAGGGCCTACTCGCAAAGGGCCTGGTAGTAGAGGTTAA
Upstream 100 bases:
>100_bases CAATGAAAGCTGTTAGTTGCGCGTTTTTCAAAGTGTGTTTGTGGCATTTTTTCAAATAGCGCAGTAGGTGGTTGCACGAT TTTATCTATATGAATAATAG
Downstream 100 bases:
>100_bases GGATTGTTTCTTTAGTCAAGTTTTCAATGAAAACTAGAATTCAAATTTGGCAATCATAGAATTTACGAAAAATGTGAATA ATAGGTGAGGCACCGCAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MRHRSWCETLVVQIKLYVEETEMTKFKCESKFGGFSAGYVYEIIDGEKVIKGYIVIDGSGKVVKKGFKSLGDAVQWAKAE YEALRKSFELAIQLEQLSQALEVEPEPEPEPQSPVRKGPTRKGPGSRG
Sequences:
>Translated_128_residues MRHRSWCETLVVQIKLYVEETEMTKFKCESKFGGFSAGYVYEIIDGEKVIKGYIVIDGSGKVVKKGFKSLGDAVQWAKAE YEALRKSFELAIQLEQLSQALEVEPEPEPEPQSPVRKGPTRKGPGSRG >Mature_128_residues MRHRSWCETLVVQIKLYVEETEMTKFKCESKFGGFSAGYVYEIIDGEKVIKGYIVIDGSGKVVKKGFKSLGDAVQWAKAE YEALRKSFELAIQLEQLSQALEVEPEPEPEPQSPVRKGPTRKGPGSRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14355; Mature: 14355
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHRSWCETLVVQIKLYVEETEMTKFKCESKFGGFSAGYVYEIIDGEKVIKGYIVIDGSG CCCHHHHHHHHHHHHHEEECCHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEEEECCCC KVVKKGFKSLGDAVQWAKAEYEALRKSFELAIQLEQLSQALEVEPEPEPEPQSPVRKGPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC RKGPGSRG CCCCCCCC >Mature Secondary Structure MRHRSWCETLVVQIKLYVEETEMTKFKCESKFGGFSAGYVYEIIDGEKVIKGYIVIDGSG CCCHHHHHHHHHHHHHEEECCHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEEEECCCC KVVKKGFKSLGDAVQWAKAEYEALRKSFELAIQLEQLSQALEVEPEPEPEPQSPVRKGPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC RKGPGSRG CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA