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The map label for this gene is xerC [H]

Identifier: 167623237

GI number: 167623237

Start: 1587770

End: 1588795

Strand: Reverse

Name: xerC [H]

Synonym: Shal_1304

Alternate gene names: 167623237

Gene position: 1588795-1587770 (Counterclockwise)

Preceding gene: 167623238

Following gene: 167623236

Centisome position: 30.4

GC content: 47.27

Gene sequence:

>1026_bases
ATGACCATCCGTAACCTAAAAGACAGCAGCGATAAACCTTGGTTATGCGAATGCTATCCCAATGGCCGCGAGGGTAAACG
CATTCGAAAGAAGTTTGCCACTCGTGGTGAAGCCACTGCATTTGAGCTGTTCACCATGAAAAAGGTCGATGACAAACCTT
GGTTAGGTGAAAAGGTTGATAACCGCCGTTTATCTGAGTTAATCAAACGCTGGCATGATCTTCACGGCCAGCAACTAACT
AAGCCAGAGCTGCGGTTACGAAAGCTGGATTTGATTTGCAATGGCATGGGCGACCCGATTGCCAGCAAGATCACCGTGAA
TGACTTTGCCAATTATCGCCAGATGCGCCTCGATGGTGAAATTGAAGATGCTCAAGGTAAGATGAACAAGGTTAAACCCA
ACACCATTAACCATGAGCATGCTTATCTCAATGCGGTTTTCTCAGAGCTGAAAAAGTTAGGCGAGTGGAAGCTACCCAAC
CCACTCGATGGCATATCTCAATTTAAAATTGAAGACACCGAGCTGGCGTTCCTCTACCCAGAAGAGATCCCCATTGTTCT
AACCGAATGTGCTAACGCCGAATACGAACACCTCACCACGATTGTGCTGATCTGTTTAGCAACAGGTTGCCGCTGGTCAG
AGGCCGAAGGTTTACGCGGCAGTCAAATAGCCCACAACCGCATCACCTTTGTTAAAACCAAAGGTAAGAAGAATCGAACC
GTGCCAATAGCGAAAGAATTAGCCGACAAGATACCACGTGCAAGAGGCCCATTATTCAGACCTTGCCGCAAGTCATTTGA
ACGTGCAATTAAACGCACTAAGTTGAATTTCCCAGACAGACAGATGACCCACATTTTACGCCACACATTTGCCAGCCACT
TTATGATGAACGGCGGCAACATTCTGGTACTAAAACAGATACTCGGCCACTCCGATATCAAAGACACCATGCGTTACGCC
CACTTCGCACCCGATCACCTGGACGACGCAATCACAAAAAACCCAATAGCAGGACTACTGAAGTGA

Upstream 100 bases:

>100_bases
TCTAAGCCATGGCCGAAAAATTGAAACAGCTATGTCACTTAAAGAGAAAGGACATGAGATTTATGTCATATCTGAAGAAC
AGTGGTTGAAATTTATTTAA

Downstream 100 bases:

>100_bases
TACAAAACAACGAGCTCTATTTAGAAATAGGAAAACTGTTATTATTAATAACAATGATAATAATAGGGGTGAGCATTCTC
TACTGGTACCTTAAAAGAAG

Product: integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MTIRNLKDSSDKPWLCECYPNGREGKRIRKKFATRGEATAFELFTMKKVDDKPWLGEKVDNRRLSELIKRWHDLHGQQLT
KPELRLRKLDLICNGMGDPIASKITVNDFANYRQMRLDGEIEDAQGKMNKVKPNTINHEHAYLNAVFSELKKLGEWKLPN
PLDGISQFKIEDTELAFLYPEEIPIVLTECANAEYEHLTTIVLICLATGCRWSEAEGLRGSQIAHNRITFVKTKGKKNRT
VPIAKELADKIPRARGPLFRPCRKSFERAIKRTKLNFPDRQMTHILRHTFASHFMMNGGNILVLKQILGHSDIKDTMRYA
HFAPDHLDDAITKNPIAGLLK

Sequences:

>Translated_341_residues
MTIRNLKDSSDKPWLCECYPNGREGKRIRKKFATRGEATAFELFTMKKVDDKPWLGEKVDNRRLSELIKRWHDLHGQQLT
KPELRLRKLDLICNGMGDPIASKITVNDFANYRQMRLDGEIEDAQGKMNKVKPNTINHEHAYLNAVFSELKKLGEWKLPN
PLDGISQFKIEDTELAFLYPEEIPIVLTECANAEYEHLTTIVLICLATGCRWSEAEGLRGSQIAHNRITFVKTKGKKNRT
VPIAKELADKIPRARGPLFRPCRKSFERAIKRTKLNFPDRQMTHILRHTFASHFMMNGGNILVLKQILGHSDIKDTMRYA
HFAPDHLDDAITKNPIAGLLK
>Mature_340_residues
TIRNLKDSSDKPWLCECYPNGREGKRIRKKFATRGEATAFELFTMKKVDDKPWLGEKVDNRRLSELIKRWHDLHGQQLTK
PELRLRKLDLICNGMGDPIASKITVNDFANYRQMRLDGEIEDAQGKMNKVKPNTINHEHAYLNAVFSELKKLGEWKLPNP
LDGISQFKIEDTELAFLYPEEIPIVLTECANAEYEHLTTIVLICLATGCRWSEAEGLRGSQIAHNRITFVKTKGKKNRTV
PIAKELADKIPRARGPLFRPCRKSFERAIKRTKLNFPDRQMTHILRHTFASHFMMNGGNILVLKQILGHSDIKDTMRYAH
FAPDHLDDAITKNPIAGLLK

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 39210; Mature: 39079

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRNLKDSSDKPWLCECYPNGREGKRIRKKFATRGEATAFELFTMKKVDDKPWLGEKVD
CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCCCCHHH
NRRLSELIKRWHDLHGQQLTKPELRLRKLDLICNGMGDPIASKITVNDFANYRQMRLDGE
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHCEEEHHHHHHHHHHHCCCC
IEDAQGKMNKVKPNTINHEHAYLNAVFSELKKLGEWKLPNPLDGISQFKIEDTELAFLYP
CCHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEECCCEEEEECC
EEIPIVLTECANAEYEHLTTIVLICLATGCRWSEAEGLRGSQIAHNRITFVKTKGKKNRT
CCCCEEEEHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
VPIAKELADKIPRARGPLFRPCRKSFERAIKRTKLNFPDRQMTHILRHTFASHFMMNGGN
CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC
ILVLKQILGHSDIKDTMRYAHFAPDHLDDAITKNPIAGLLK
EEEEHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCHHHHCC
>Mature Secondary Structure 
TIRNLKDSSDKPWLCECYPNGREGKRIRKKFATRGEATAFELFTMKKVDDKPWLGEKVD
CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCCCCHHH
NRRLSELIKRWHDLHGQQLTKPELRLRKLDLICNGMGDPIASKITVNDFANYRQMRLDGE
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHCEEEHHHHHHHHHHHCCCC
IEDAQGKMNKVKPNTINHEHAYLNAVFSELKKLGEWKLPNPLDGISQFKIEDTELAFLYP
CCHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEECCCEEEEECC
EEIPIVLTECANAEYEHLTTIVLICLATGCRWSEAEGLRGSQIAHNRITFVKTKGKKNRT
CCCCEEEEHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
VPIAKELADKIPRARGPLFRPCRKSFERAIKRTKLNFPDRQMTHILRHTFASHFMMNGGN
CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC
ILVLKQILGHSDIKDTMRYAHFAPDHLDDAITKNPIAGLLK
EEEEHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA