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The map label for this gene is 167623233

Identifier: 167623233

GI number: 167623233

Start: 1584532

End: 1585779

Strand: Direct

Name: 167623233

Synonym: Shal_1300

Alternate gene names: NA

Gene position: 1584532-1585779 (Clockwise)

Preceding gene: 167623229

Following gene: 167623234

Centisome position: 30.31

GC content: 31.97

Gene sequence:

>1248_bases
GTGCACTTTAAAAAATTGGAAATAAATCATTGGCAGCAATTTGAAACTGTCGACCTAGCAATACATGATCGATTAACGAT
TATTACAGGATCTAATGGTTGTGGTAAAACGACTATTTTGAATTTATTTTCAAAGCATTCAGGTTGGCAAAATATTTCGT
TATCTACGCCAAAAAAAGATTCAAGTACAGGTGTTGTTAAATATTTTTCTAGATTGTTTAAGGGGAATACTAGTGAATCA
AACAATACCGTCGGTAAAATACACTATTCAAATAATGTAGAAGCCCTTCTACTAGTAAAAGATTCTGATGTTGCTCAGTA
TCATGTACAAATTCAGAATCAACAGCCATTAAAAAGTTTCTTTATACCTTCTCATCGTACAATATTTAGGTACCAAGCTC
TTAACCATATACCTACTGCTAAAAAAAATAAACAGAATGCATTTGATGAGGTTTCAAATGCAAACAAGCAAAGGTATAAC
GGTAGTTCAAGTAATCAGTCTGCTAGTTTTTTAATGAAAACTACGCTTATTGGTTGGGCTATAAATGGTTATGGAGTAAC
GAATAATAATAAAACAATAATGCCTCAGGACAATGAACAAATTAAATTTTATGAGGGATTTCAGGAAGTGCTTAGAAAAA
TACTTCCAAAAACCTTAGGTTTCAAAGAGTTTGAAATTAGAAATATGGAAATTGTTTTTATTTGTAATGATGGTTCTGAT
GAATTCCTATTAGAAACGGCTTCTGGCGGCATTAGTGCTCTTATCGATATTGCTTGGCAAATATATATGTATGCAACAAA
AGATAATCCTGATTATACCGTTATAATTGATGAGGTTGAAAATCATCTTCACCCAATAATGCAGAGAAGGATATTACCAG
ATCTTTTACAAGCATTCCCCACTGCGAAGTTTATTGTATCAACACATAGCCCATTAGTTGTAGGCTCAGTAAAAAACTCA
AATATATATGCTTTAACTTATAATGAAGAAAATAAAGTTGAGTCTAAAAAATTGGATTTTTTGAATGAAGCTAAAAGTGC
TAGTGAAATTCTAGATGAGGTTTTAGGGGTCTCATTTACAATGCCTATATGGGTTGAAGAAAGGTTAAATCAAATAATTG
ATGAATACAGTAATAAAAAATTAACTGAAAGAGATTTCTCTTTGTTAAGGAGCCAGTTGGCAGAGTTAGGCTTAGAGAAA
ATGGTTCCTATGGCAATACAAGGAATCATGGAGGGACAAGATGATTAA

Upstream 100 bases:

>100_bases
TATTAGATCTGTATAAAAACAGTTATATTTTAGTACTACACACAAACAGTATCTACTTTTATGACTAACGATAGTCACCA
AGTCACTTTAAGGAATAAAT

Downstream 100 bases:

>100_bases
GCTAAATAGACCTGTGTGCCCGCACCCTGATGCATTAGCTAGAGGAAACTATAAACACCCGGCGAATAAAGAGGCACTTA
AGGCTGCTAACTCTGATAAA

Product: ATP-dependent OLD family endonuclease

Products: NA

Alternate protein names: ATP-Dependent OLD Family Endonuclease; ATPase; RecF/RecN/SMC N Terminal Domain; RecF/RecN/SMC Family Protein; SMC Domain Protein

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MHFKKLEINHWQQFETVDLAIHDRLTIITGSNGCGKTTILNLFSKHSGWQNISLSTPKKDSSTGVVKYFSRLFKGNTSES
NNTVGKIHYSNNVEALLLVKDSDVAQYHVQIQNQQPLKSFFIPSHRTIFRYQALNHIPTAKKNKQNAFDEVSNANKQRYN
GSSSNQSASFLMKTTLIGWAINGYGVTNNNKTIMPQDNEQIKFYEGFQEVLRKILPKTLGFKEFEIRNMEIVFICNDGSD
EFLLETASGGISALIDIAWQIYMYATKDNPDYTVIIDEVENHLHPIMQRRILPDLLQAFPTAKFIVSTHSPLVVGSVKNS
NIYALTYNEENKVESKKLDFLNEAKSASEILDEVLGVSFTMPIWVEERLNQIIDEYSNKKLTERDFSLLRSQLAELGLEK
MVPMAIQGIMEGQDD

Sequences:

>Translated_415_residues
MHFKKLEINHWQQFETVDLAIHDRLTIITGSNGCGKTTILNLFSKHSGWQNISLSTPKKDSSTGVVKYFSRLFKGNTSES
NNTVGKIHYSNNVEALLLVKDSDVAQYHVQIQNQQPLKSFFIPSHRTIFRYQALNHIPTAKKNKQNAFDEVSNANKQRYN
GSSSNQSASFLMKTTLIGWAINGYGVTNNNKTIMPQDNEQIKFYEGFQEVLRKILPKTLGFKEFEIRNMEIVFICNDGSD
EFLLETASGGISALIDIAWQIYMYATKDNPDYTVIIDEVENHLHPIMQRRILPDLLQAFPTAKFIVSTHSPLVVGSVKNS
NIYALTYNEENKVESKKLDFLNEAKSASEILDEVLGVSFTMPIWVEERLNQIIDEYSNKKLTERDFSLLRSQLAELGLEK
MVPMAIQGIMEGQDD
>Mature_415_residues
MHFKKLEINHWQQFETVDLAIHDRLTIITGSNGCGKTTILNLFSKHSGWQNISLSTPKKDSSTGVVKYFSRLFKGNTSES
NNTVGKIHYSNNVEALLLVKDSDVAQYHVQIQNQQPLKSFFIPSHRTIFRYQALNHIPTAKKNKQNAFDEVSNANKQRYN
GSSSNQSASFLMKTTLIGWAINGYGVTNNNKTIMPQDNEQIKFYEGFQEVLRKILPKTLGFKEFEIRNMEIVFICNDGSD
EFLLETASGGISALIDIAWQIYMYATKDNPDYTVIIDEVENHLHPIMQRRILPDLLQAFPTAKFIVSTHSPLVVGSVKNS
NIYALTYNEENKVESKKLDFLNEAKSASEILDEVLGVSFTMPIWVEERLNQIIDEYSNKKLTERDFSLLRSQLAELGLEK
MVPMAIQGIMEGQDD

Specific function: Unknown

COG id: COG3950

COG function: function code R; Predicted ATP-binding protein involved in virulence

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47234; Mature: 47234

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFKKLEINHWQQFETVDLAIHDRLTIITGSNGCGKTTILNLFSKHSGWQNISLSTPKKD
CCCEEECCCCCCCCEEEEEEEECEEEEEECCCCCCHHHHHHHHHHCCCCCEEEECCCCCC
SSTGVVKYFSRLFKGNTSESNNTVGKIHYSNNVEALLLVKDSDVAQYHVQIQNQQPLKSF
CCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEECCCCCHHHH
FIPSHRTIFRYQALNHIPTAKKNKQNAFDEVSNANKQRYNGSSSNQSASFLMKTTLIGWA
CCCCCCCEEEEHHHHCCCCCCCCCHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHEEE
INGYGVTNNNKTIMPQDNEQIKFYEGFQEVLRKILPKTLGFKEFEIRNMEIVFICNDGSD
EECEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECEEEEEEECCCCC
EFLLETASGGISALIDIAWQIYMYATKDNPDYTVIIDEVENHLHPIMQRRILPDLLQAFP
CEEEEECCCCHHHHHHHEEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCC
TAKFIVSTHSPLVVGSVKNSNIYALTYNEENKVESKKLDFLNEAKSASEILDEVLGVSFT
CEEEEEECCCCEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEE
MPIWVEERLNQIIDEYSNKKLTERDFSLLRSQLAELGLEKMVPMAIQGIMEGQDD
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHFKKLEINHWQQFETVDLAIHDRLTIITGSNGCGKTTILNLFSKHSGWQNISLSTPKKD
CCCEEECCCCCCCCEEEEEEEECEEEEEECCCCCCHHHHHHHHHHCCCCCEEEECCCCCC
SSTGVVKYFSRLFKGNTSESNNTVGKIHYSNNVEALLLVKDSDVAQYHVQIQNQQPLKSF
CCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEECCCCCHHHH
FIPSHRTIFRYQALNHIPTAKKNKQNAFDEVSNANKQRYNGSSSNQSASFLMKTTLIGWA
CCCCCCCEEEEHHHHCCCCCCCCCHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHEEE
INGYGVTNNNKTIMPQDNEQIKFYEGFQEVLRKILPKTLGFKEFEIRNMEIVFICNDGSD
EECEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECEEEEEEECCCCC
EFLLETASGGISALIDIAWQIYMYATKDNPDYTVIIDEVENHLHPIMQRRILPDLLQAFP
CEEEEECCCCHHHHHHHEEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCC
TAKFIVSTHSPLVVGSVKNSNIYALTYNEENKVESKKLDFLNEAKSASEILDEVLGVSFT
CEEEEEECCCCEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEE
MPIWVEERLNQIIDEYSNKKLTERDFSLLRSQLAELGLEKMVPMAIQGIMEGQDD
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA