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The map label for this gene is ypjH [H]

Identifier: 167623209

GI number: 167623209

Start: 1555237

End: 1556412

Strand: Direct

Name: ypjH [H]

Synonym: Shal_1275

Alternate gene names: 167623209

Gene position: 1555237-1556412 (Clockwise)

Preceding gene: 167623206

Following gene: 167623210

Centisome position: 29.75

GC content: 42.86

Gene sequence:

>1176_bases
ATGCGCATAGGGATAGTGTGCCACCCCAGTATAGGTGGTTCAGGCTTGGTTGCAACTGAGCTAGGGTTAGGACTGGCTCA
GTTAGGACATGAGGTGCACTTTATTTCGAGTGTGCGTCCTTTTAAGTTAATAGAAGATTCTAATCATCTTTTTTTTCACT
CCGTAGAGGCAATTAATTACCCTCTGTTCTCCGATCCTCTTTATACATTCGCACTAACTGCAAAAATAGTTGAGGTGGTG
GAGCAATTTAAGCTCGATATTGTCCACGCACATTACTCTATTCCTCACTCACTATGTGCTTATTTAGCCGGTGAGATCAC
TGAACATAAATTTCCCACAATCACTACGATTCATGGTACAGATGTCACCATTGTTGGCCAAGATAAGCCGCTCTATCCTC
TAAATCGTTTTAGTATTCATAAAAGTACTAAAGTCACTACGGTATCTAATTATCAGCGTAACTATATTTATAGTCATTTC
GATAAGACAAAGGCGATAGATGTTATTCATAACTTCATCGATTTAGCTGTTTTTTCACCAGAGTTCGCCAATATTCATAC
TCGTAGGAAGATGGCTTTTGATGATGAAAAAATCGTCATGCATGTATCGAACTTCAGGCCACTAAAAAATAGCGATACGG
TTATCCGAGCATTTTATATTTTACGCAAAAAGGTGAAGGCGCGCTTGGTGCTGCTCGGCAGTGGCCCGGATATCGATGGC
ATTAAGCAACAGTGTGAAAAGCTAGGAATTTTAAAGCATGTCACCTTTATGGGGGATGTAACCCATGTTGAACATTATCT
CCCCAATGCCGATTGTATGATCCAACCTAGCTATCGAGAGTCATTTAGTATGGTATTGCTAGAGGCGATGGCCTGCGCTG
TACCAACGGTGAGCAGTAACGTCGATGGCATCCCCGAGGTGGTCGACAATGCTAAAACTGGATTTATGTTCGATCCCGAT
GATGCCATCGGAATGGCAAAGGCGATGACACAAATTCTAACTGAACCGCAAAAGAAAACTAAGATGGGGCAGGCTGGCAG
GCAGCGGGCTGCTAACTTATTTAACCCAAAGGATAAGATTGCCCAATATTTAGCTTGCTATCTTGAGGCCATTGATGATT
GCTGCAGTAAGTGTTCATCAGAACCAGCGTTGCAAGGAGGCACGAATGAGCAGTGA

Upstream 100 bases:

>100_bases
TGCATTATTAAGAATGACTTGGAGCAAGTGCTTAACAGTGTTAAGTTTCTTTGCTGTAACATTTTGTTAACCATCTAAGC
AAGGGGAGTGTATGTCTAGG

Downstream 100 bases:

>100_bases
AACGAGTAACGTAGAGTCTGAAGCTAAGCTTGCTGAACAAGATAAGCCCAAACAAAAGATGAGTATGTCGACGTTGGTTT
TACTGTCATTTGCGGCGGGT

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MRIGIVCHPSIGGSGLVATELGLGLAQLGHEVHFISSVRPFKLIEDSNHLFFHSVEAINYPLFSDPLYTFALTAKIVEVV
EQFKLDIVHAHYSIPHSLCAYLAGEITEHKFPTITTIHGTDVTIVGQDKPLYPLNRFSIHKSTKVTTVSNYQRNYIYSHF
DKTKAIDVIHNFIDLAVFSPEFANIHTRRKMAFDDEKIVMHVSNFRPLKNSDTVIRAFYILRKKVKARLVLLGSGPDIDG
IKQQCEKLGILKHVTFMGDVTHVEHYLPNADCMIQPSYRESFSMVLLEAMACAVPTVSSNVDGIPEVVDNAKTGFMFDPD
DAIGMAKAMTQILTEPQKKTKMGQAGRQRAANLFNPKDKIAQYLACYLEAIDDCCSKCSSEPALQGGTNEQ

Sequences:

>Translated_391_residues
MRIGIVCHPSIGGSGLVATELGLGLAQLGHEVHFISSVRPFKLIEDSNHLFFHSVEAINYPLFSDPLYTFALTAKIVEVV
EQFKLDIVHAHYSIPHSLCAYLAGEITEHKFPTITTIHGTDVTIVGQDKPLYPLNRFSIHKSTKVTTVSNYQRNYIYSHF
DKTKAIDVIHNFIDLAVFSPEFANIHTRRKMAFDDEKIVMHVSNFRPLKNSDTVIRAFYILRKKVKARLVLLGSGPDIDG
IKQQCEKLGILKHVTFMGDVTHVEHYLPNADCMIQPSYRESFSMVLLEAMACAVPTVSSNVDGIPEVVDNAKTGFMFDPD
DAIGMAKAMTQILTEPQKKTKMGQAGRQRAANLFNPKDKIAQYLACYLEAIDDCCSKCSSEPALQGGTNEQ
>Mature_391_residues
MRIGIVCHPSIGGSGLVATELGLGLAQLGHEVHFISSVRPFKLIEDSNHLFFHSVEAINYPLFSDPLYTFALTAKIVEVV
EQFKLDIVHAHYSIPHSLCAYLAGEITEHKFPTITTIHGTDVTIVGQDKPLYPLNRFSIHKSTKVTTVSNYQRNYIYSHF
DKTKAIDVIHNFIDLAVFSPEFANIHTRRKMAFDDEKIVMHVSNFRPLKNSDTVIRAFYILRKKVKARLVLLGSGPDIDG
IKQQCEKLGILKHVTFMGDVTHVEHYLPNADCMIQPSYRESFSMVLLEAMACAVPTVSSNVDGIPEVVDNAKTGFMFDPD
DAIGMAKAMTQILTEPQKKTKMGQAGRQRAANLFNPKDKIAQYLACYLEAIDDCCSKCSSEPALQGGTNEQ

Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI9755344, Length=333, Percent_Identity=26.1261261261261, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 43594; Mature: 43594

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIGIVCHPSIGGSGLVATELGLGLAQLGHEVHFISSVRPFKLIEDSNHLFFHSVEAINY
CEEEEEECCCCCCCCEEHHHHHHHHHHHCCCEEECCCCCCEEEEECCCCEEEEEHHHHCC
PLFSDPLYTFALTAKIVEVVEQFKLDIVHAHYSIPHSLCAYLAGEITEHKFPTITTIHGT
CCCCCHHHHHHHHHHHHHHHHHHHHHHEEEHHCCHHHHHHHHHHHHHCCCCCEEEEECCC
DVTIVGQDKPLYPLNRFSIHKSTKVTTVSNYQRNYIYSHFDKTKAIDVIHNFIDLAVFSP
EEEEEECCCCCCCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EFANIHTRRKMAFDDEKIVMHVSNFRPLKNSDTVIRAFYILRKKVKARLVLLGSGPDIDG
HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCHHH
IKQQCEKLGILKHVTFMGDVTHVEHYLPNADCMIQPSYRESFSMVLLEAMACAVPTVSSN
HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCC
VDGIPEVVDNAKTGFMFDPDDAIGMAKAMTQILTEPQKKTKMGQAGRQRAANLFNPKDKI
CCCCHHHHCCCCCCCEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHH
AQYLACYLEAIDDCCSKCSSEPALQGGTNEQ
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRIGIVCHPSIGGSGLVATELGLGLAQLGHEVHFISSVRPFKLIEDSNHLFFHSVEAINY
CEEEEEECCCCCCCCEEHHHHHHHHHHHCCCEEECCCCCCEEEEECCCCEEEEEHHHHCC
PLFSDPLYTFALTAKIVEVVEQFKLDIVHAHYSIPHSLCAYLAGEITEHKFPTITTIHGT
CCCCCHHHHHHHHHHHHHHHHHHHHHHEEEHHCCHHHHHHHHHHHHHCCCCCEEEEECCC
DVTIVGQDKPLYPLNRFSIHKSTKVTTVSNYQRNYIYSHFDKTKAIDVIHNFIDLAVFSP
EEEEEECCCCCCCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EFANIHTRRKMAFDDEKIVMHVSNFRPLKNSDTVIRAFYILRKKVKARLVLLGSGPDIDG
HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCHHH
IKQQCEKLGILKHVTFMGDVTHVEHYLPNADCMIQPSYRESFSMVLLEAMACAVPTVSSN
HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCC
VDGIPEVVDNAKTGFMFDPDDAIGMAKAMTQILTEPQKKTKMGQAGRQRAANLFNPKDKI
CCCCHHHHCCCCCCCEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHH
AQYLACYLEAIDDCCSKCSSEPALQGGTNEQ
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]