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The map label for this gene is nylB [H]

Identifier: 167623204

GI number: 167623204

Start: 1548730

End: 1550031

Strand: Direct

Name: nylB [H]

Synonym: Shal_1270

Alternate gene names: 167623204

Gene position: 1548730-1550031 (Clockwise)

Preceding gene: 167623203

Following gene: 167623205

Centisome position: 29.63

GC content: 44.47

Gene sequence:

>1302_bases
ATGAAAACATTACTTATCAATACACTCGTTGGTGTGTTTATTTTAGCCCAAGCTATTCCCACTCAAGCCGTTGAGTTTAA
GCCTGTTGATACAAGATTTGTAACACAAGCTACAGCCTTTGCTGTGACTCAGGATAATTGGGATCAAGCCGCTAATGCCG
CGGTGACATTTCCCCATGCATATCGATTCACACCTTATATGCATATCACGCCTTTAAAGCTACGTACAGCAGAGCCATGG
AAGTCGACACCGATTGAATTATTGTCGCTAAAAGCAAACGATCTGGACGGTGAGCATAGCCTAGAGGTTTTACTCAGAGA
CCGATTAAAGAATCACTCTATGGTGGTGTTAAATCGAGGCAAGTTAGTACATCAACATTTCTTCAATGGTTACGACTCAA
ATCAAACACACCTTCAGATGTCAGTGACAAAGTCATTTACCGCAATCTTAGCGGCAATATCGGTTGCAGAGAGAAAGCTT
GATATGAGCCGGCCGATAGTGAGTTACCTACCTGAGCTTATCGATAGTGGCTTTGAAGATGCGACGGTGCAAGAGGTTGC
CGATATGCGCTCGGGAATTGGGGTTAAATTTACTCAAGGTAAACTTTGGGATGATCGCATGACCGAAGCGCAGGACTGGA
ATGGCGATAGTAAATATCCAAATATGCGCCACATTATGGATTATGCCAAGACCTTAGATAATCATCGCCCGATAGGCAAA
GTTTATGATTATTTGGATATCAATACTGAACTGCTGGGTAAGGTCGTTGAAAAGGTGCAGGGTAAGCCATTAGCCGAGGT
TTTTGCTGAAAAATTATGGCATAGAATCGATGTGGAAAATCCAGTACGTTGGATGGCCAATCGAAATGGTGAAGTGGTGG
CATCTGGTGGGTTAAATATCACGACTCGAGATCTAGCCAGAGTTGGGCAAGTGATTCTCAACGGCGGTAAGAACTTTGCG
GGTGAGCAGGTGATCCCTATAGCGTTTATTGAGTCACTGATGCAAGGCAACAACAAGGTCCGTCACGCATGGTTACAGGG
CAAGGAGTCCAAGCTTGCTAAAGGCTGGTATCAAGATCAGTTTAGAGTGCTGCATATTACTAATGGTAAAGGAAAAACCT
ATAAGTTCTTGGCAATGGTCGGCATTCATGGACAAATTCTGGCAATGGACTTAGAGAGCCAAACCGTGATTGCGATGAAC
TCGGGCTTTGGTGATATGGAGCCGCCAAGAATGGCCTTGATGATCTTTAAGCAGATCATTCCAGCGATTCTAGATGCCAT
GTCAGTCACAGGGGGTGATTAG

Upstream 100 bases:

>100_bases
GATCACCACTTCTTCAGAGTTCTTTGACCATAATGGCCATGTTTGTTTTGAGTTTGAAACCGTGATTAACCACTAACCAT
TAGCCGTAGTCGGAGTGATT

Downstream 100 bases:

>100_bases
AGTAGGTATGAGTCTTACAGGCATAAGTTAACTAGATAGGTGTTTCATGGACTCTCTAGCCAAGGATGGCCCCCTATATT
TTTGTGAGTCCTGCTGTTAT

Product: beta-lactamase

Products: NA

Alternate protein names: Nylon oligomers-degrading enzyme EII [H]

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MKTLLINTLVGVFILAQAIPTQAVEFKPVDTRFVTQATAFAVTQDNWDQAANAAVTFPHAYRFTPYMHITPLKLRTAEPW
KSTPIELLSLKANDLDGEHSLEVLLRDRLKNHSMVVLNRGKLVHQHFFNGYDSNQTHLQMSVTKSFTAILAAISVAERKL
DMSRPIVSYLPELIDSGFEDATVQEVADMRSGIGVKFTQGKLWDDRMTEAQDWNGDSKYPNMRHIMDYAKTLDNHRPIGK
VYDYLDINTELLGKVVEKVQGKPLAEVFAEKLWHRIDVENPVRWMANRNGEVVASGGLNITTRDLARVGQVILNGGKNFA
GEQVIPIAFIESLMQGNNKVRHAWLQGKESKLAKGWYQDQFRVLHITNGKGKTYKFLAMVGIHGQILAMDLESQTVIAMN
SGFGDMEPPRMALMIFKQIIPAILDAMSVTGGD

Sequences:

>Translated_433_residues
MKTLLINTLVGVFILAQAIPTQAVEFKPVDTRFVTQATAFAVTQDNWDQAANAAVTFPHAYRFTPYMHITPLKLRTAEPW
KSTPIELLSLKANDLDGEHSLEVLLRDRLKNHSMVVLNRGKLVHQHFFNGYDSNQTHLQMSVTKSFTAILAAISVAERKL
DMSRPIVSYLPELIDSGFEDATVQEVADMRSGIGVKFTQGKLWDDRMTEAQDWNGDSKYPNMRHIMDYAKTLDNHRPIGK
VYDYLDINTELLGKVVEKVQGKPLAEVFAEKLWHRIDVENPVRWMANRNGEVVASGGLNITTRDLARVGQVILNGGKNFA
GEQVIPIAFIESLMQGNNKVRHAWLQGKESKLAKGWYQDQFRVLHITNGKGKTYKFLAMVGIHGQILAMDLESQTVIAMN
SGFGDMEPPRMALMIFKQIIPAILDAMSVTGGD
>Mature_433_residues
MKTLLINTLVGVFILAQAIPTQAVEFKPVDTRFVTQATAFAVTQDNWDQAANAAVTFPHAYRFTPYMHITPLKLRTAEPW
KSTPIELLSLKANDLDGEHSLEVLLRDRLKNHSMVVLNRGKLVHQHFFNGYDSNQTHLQMSVTKSFTAILAAISVAERKL
DMSRPIVSYLPELIDSGFEDATVQEVADMRSGIGVKFTQGKLWDDRMTEAQDWNGDSKYPNMRHIMDYAKTLDNHRPIGK
VYDYLDINTELLGKVVEKVQGKPLAEVFAEKLWHRIDVENPVRWMANRNGEVVASGGLNITTRDLARVGQVILNGGKNFA
GEQVIPIAFIESLMQGNNKVRHAWLQGKESKLAKGWYQDQFRVLHITNGKGKTYKFLAMVGIHGQILAMDLESQTVIAMN
SGFGDMEPPRMALMIFKQIIPAILDAMSVTGGD

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: =3.5.1.46 [H]

Molecular weight: Translated: 48580; Mature: 48580

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLLINTLVGVFILAQAIPTQAVEFKPVDTRFVTQATAFAVTQDNWDQAANAAVTFPHA
CCHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHEEEEECCCHHHHCCCEEECCCC
YRFTPYMHITPLKLRTAEPWKSTPIELLSLKANDLDGEHSLEVLLRDRLKNHSMVVLNRG
EEECCEEEEECEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECC
KLVHQHFFNGYDSNQTHLQMSVTKSFTAILAAISVAERKLDMSRPIVSYLPELIDSGFED
CCHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
ATVQEVADMRSGIGVKFTQGKLWDDRMTEAQDWNGDSKYPNMRHIMDYAKTLDNHRPIGK
HHHHHHHHHHCCCCEEEECCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHH
VYDYLDINTELLGKVVEKVQGKPLAEVFAEKLWHRIDVENPVRWMANRNGEVVASGGLNI
HHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEECCCCCE
TTRDLARVGQVILNGGKNFAGEQVIPIAFIESLMQGNNKVRHAWLQGKESKLAKGWYQDQ
EHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEHHHHCCCHHHHHCCCCCCC
FRVLHITNGKGKTYKFLAMVGIHGQILAMDLESQTVIAMNSGFGDMEPPRMALMIFKQII
EEEEEEECCCCCEEEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHH
PAILDAMSVTGGD
HHHHHHHHCCCCC
>Mature Secondary Structure
MKTLLINTLVGVFILAQAIPTQAVEFKPVDTRFVTQATAFAVTQDNWDQAANAAVTFPHA
CCHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHEEEEECCCHHHHCCCEEECCCC
YRFTPYMHITPLKLRTAEPWKSTPIELLSLKANDLDGEHSLEVLLRDRLKNHSMVVLNRG
EEECCEEEEECEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECC
KLVHQHFFNGYDSNQTHLQMSVTKSFTAILAAISVAERKLDMSRPIVSYLPELIDSGFED
CCHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
ATVQEVADMRSGIGVKFTQGKLWDDRMTEAQDWNGDSKYPNMRHIMDYAKTLDNHRPIGK
HHHHHHHHHHCCCCEEEECCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHH
VYDYLDINTELLGKVVEKVQGKPLAEVFAEKLWHRIDVENPVRWMANRNGEVVASGGLNI
HHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEECCCCCE
TTRDLARVGQVILNGGKNFAGEQVIPIAFIESLMQGNNKVRHAWLQGKESKLAKGWYQDQ
EHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEHHHHCCCHHHHHCCCCCCC
FRVLHITNGKGKTYKFLAMVGIHGQILAMDLESQTVIAMNSGFGDMEPPRMALMIFKQII
EEEEEEECCCCCEEEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHH
PAILDAMSVTGGD
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 6646204; 6389532; 2512123 [H]