| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is kefG [H]
Identifier: 167623194
GI number: 167623194
Start: 1534460
End: 1535080
Strand: Reverse
Name: kefG [H]
Synonym: Shal_1260
Alternate gene names: 167623194
Gene position: 1535080-1534460 (Counterclockwise)
Preceding gene: 167623200
Following gene: 167623193
Centisome position: 29.37
GC content: 46.54
Gene sequence:
>621_bases ATGGCACAAGTGGCAAAAAAAATTCTCGTACTGTATGCACACCCCTCCCAAGAACGATCCGAAATCAATACTCCTCTATT TAAAACGACCCAGTTGCAGCCAAACGTAACCGCCGTTGATCTCTATGGTGAGTACCCCACCTTTAGGATCAATATTGACA GGGAACAACAAAGACTCAGAGACCACGATATCGTGGTTTTTATGTTTCCACTGTATTGGTACTCCACACCTGCGATTTTA AAAGAGTGGCAAGATCTGGTTTTAGAGTACAACTTTGCCTACGGTGCTAAAGGTAAAACCCTATGTGGAAAAACCTTTCT GTGCGCCCTTAGCGCAGGAGGGAGTGAGTCAGCATACTGCGAGGAGGGTTATAACCACTTTTCTCTAAGAGAACTACTGC GGCCTCTAGAGCAGATGGCCAACTTAACTGGCATGAACTTCTTAGCCCCATTCGCACTGTTCTGCGCCCGAACCGCCTCA GAGGAAAACCGAGTCGATACTCATGTTCAAAAATGGATTAGAACACTCAGGGCACTCAGTGAGGACAGATTCGATATCGA GTTCGCGCAATCGCTCGAAAAACTCAATGGCCATCTAGACCAACTGATCAGGGAGCACTAA
Upstream 100 bases:
>100_bases AGCAGCAACACTCAGCAGGTTTCCCCCTAAAAACCCTTAGCGCATCTCCTTGTCTATGCTAGATTTAATAGCAATCGATT ATGAAAGAACTGGGTAAAAA
Downstream 100 bases:
>100_bases TGACAGCTTATTTTATTCAAGCTTTTATCTATTTATGCGCCGCAGTTATCGCTGTACCCATCGCCAAAAGACTCGGCCTA GGCTCAGTACTGGGCTACTT
Product: NAD(P)H dehydrogenase (quinone)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MAQVAKKILVLYAHPSQERSEINTPLFKTTQLQPNVTAVDLYGEYPTFRINIDREQQRLRDHDIVVFMFPLYWYSTPAIL KEWQDLVLEYNFAYGAKGKTLCGKTFLCALSAGGSESAYCEEGYNHFSLRELLRPLEQMANLTGMNFLAPFALFCARTAS EENRVDTHVQKWIRTLRALSEDRFDIEFAQSLEKLNGHLDQLIREH
Sequences:
>Translated_206_residues MAQVAKKILVLYAHPSQERSEINTPLFKTTQLQPNVTAVDLYGEYPTFRINIDREQQRLRDHDIVVFMFPLYWYSTPAIL KEWQDLVLEYNFAYGAKGKTLCGKTFLCALSAGGSESAYCEEGYNHFSLRELLRPLEQMANLTGMNFLAPFALFCARTAS EENRVDTHVQKWIRTLRALSEDRFDIEFAQSLEKLNGHLDQLIREH >Mature_205_residues AQVAKKILVLYAHPSQERSEINTPLFKTTQLQPNVTAVDLYGEYPTFRINIDREQQRLRDHDIVVFMFPLYWYSTPAILK EWQDLVLEYNFAYGAKGKTLCGKTFLCALSAGGSESAYCEEGYNHFSLRELLRPLEQMANLTGMNFLAPFALFCARTASE ENRVDTHVQKWIRTLRALSEDRFDIEFAQSLEKLNGHLDQLIREH
Specific function: Required for full activity of kefB [H]
COG id: COG2249
COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family. KefG subfamily [H]
Homologues:
Organism=Homo sapiens, GI156564357, Length=217, Percent_Identity=30.8755760368664, Blast_Score=86, Evalue=2e-17, Organism=Escherichia coli, GI1789750, Length=162, Percent_Identity=43.8271604938272, Blast_Score=136, Evalue=1e-33, Organism=Escherichia coli, GI1786231, Length=156, Percent_Identity=37.1794871794872, Blast_Score=109, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003680 [H]
Pfam domain/function: PF02525 Flavodoxin_2 [H]
EC number: 1.6.99.- [C]
Molecular weight: Translated: 23858; Mature: 23727
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQVAKKILVLYAHPSQERSEINTPLFKTTQLQPNVTAVDLYGEYPTFRINIDREQQRLR CHHHHHHHEEEEECCCHHHHHCCCCCEEECCCCCCCEEEEEECCCCEEEEEECHHHHHHH DHDIVVFMFPLYWYSTPAILKEWQDLVLEYNFAYGAKGKTLCGKTFLCALSAGGSESAYC HCCEEEEEEHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHCHHHHEEEECCCCCCCHH EEGYNHFSLRELLRPLEQMANLTGMNFLAPFALFCARTASEENRVDTHVQKWIRTLRALS HHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH EDRFDIEFAQSLEKLNGHLDQLIREH CCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AQVAKKILVLYAHPSQERSEINTPLFKTTQLQPNVTAVDLYGEYPTFRINIDREQQRLR HHHHHHHEEEEECCCHHHHHCCCCCEEECCCCCCCEEEEEECCCCEEEEEECHHHHHHH DHDIVVFMFPLYWYSTPAILKEWQDLVLEYNFAYGAKGKTLCGKTFLCALSAGGSESAYC HCCEEEEEEHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHCHHHHEEEECCCCCCCHH EEGYNHFSLRELLRPLEQMANLTGMNFLAPFALFCARTASEENRVDTHVQKWIRTLRALS HHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH EDRFDIEFAQSLEKLNGHLDQLIREH CCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA