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The map label for this gene is nrdR [H]

Identifier: 167623138

GI number: 167623138

Start: 1464570

End: 1465019

Strand: Direct

Name: nrdR [H]

Synonym: Shal_1204

Alternate gene names: 167623138

Gene position: 1464570-1465019 (Clockwise)

Preceding gene: 167623137

Following gene: 167623139

Centisome position: 28.02

GC content: 44.44

Gene sequence:

>450_bases
ATGCATTGTCCATTTTGCAGCGCAACTGACACAAAAGTGATTGATTCGCGATTAGTCGCTGACGGCCATCAGGTTCGTCG
ACGTAGAGAGTGTGTTCAATGCCATGAACGTTTTACCACCTTTGAAGGTGCCGAGCTTGTGATGCCTCGGGTAGTGAAAC
AAGATGGCAGCCGCCAGCCGTTTGATGAAGAAAAACTGCGCGGTGGTATGTTAAGAGCCGTAGAGAAAAGACCTGTGTCT
ATGGATCAAATTGAGCAGGCATTAACTAAGATTAAATCGACTTTACGCGCGACCGGTGAGCGTGAAGTGAAATCAGAAAT
GATAGGTAACCTGATGATGGATCATTTAGTCAACTTAGATAAAGTTGCCTATATTCGTTTTGCTTCTGTCTATCGTGCCT
TTGAAGATGTTTCAGAGTTTGGTGATGCGATCGCTAAACTGCAAAAGTAA

Upstream 100 bases:

>100_bases
TGTTCTTATTCGAGTATACATTTGATTCGAGCATACTTTCTGAACTGAGGTTTAGCTAAATCCAGTGAGTGAAACTAACT
AATTTCTAAACGGAGGCTAA

Downstream 100 bases:

>100_bases
CCTATGCTACATGGGCTAAGTTCAACGTATAGCCCTCCATCAATCGAACAATCGGAATTGCCGCCATTATGTGGTCTATC
GAAGACAGTCAAATGATGAG

Product: transcriptional regulator NrdR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MHCPFCSATDTKVIDSRLVADGHQVRRRRECVQCHERFTTFEGAELVMPRVVKQDGSRQPFDEEKLRGGMLRAVEKRPVS
MDQIEQALTKIKSTLRATGEREVKSEMIGNLMMDHLVNLDKVAYIRFASVYRAFEDVSEFGDAIAKLQK

Sequences:

>Translated_149_residues
MHCPFCSATDTKVIDSRLVADGHQVRRRRECVQCHERFTTFEGAELVMPRVVKQDGSRQPFDEEKLRGGMLRAVEKRPVS
MDQIEQALTKIKSTLRATGEREVKSEMIGNLMMDHLVNLDKVAYIRFASVYRAFEDVSEFGDAIAKLQK
>Mature_149_residues
MHCPFCSATDTKVIDSRLVADGHQVRRRRECVQCHERFTTFEGAELVMPRVVKQDGSRQPFDEEKLRGGMLRAVEKRPVS
MDQIEQALTKIKSTLRATGEREVKSEMIGNLMMDHLVNLDKVAYIRFASVYRAFEDVSEFGDAIAKLQK

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes [H]

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain [H]

Homologues:

Organism=Escherichia coli, GI1786615, Length=148, Percent_Identity=72.2972972972973, Blast_Score=226, Evalue=4e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR003796 [H]

Pfam domain/function: PF03477 ATP-cone [H]

EC number: NA

Molecular weight: Translated: 17063; Mature: 17063

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHCPFCSATDTKVIDSRLVADGHQVRRRRECVQCHERFTTFEGAELVMPRVVKQDGSRQP
CCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
FDEEKLRGGMLRAVEKRPVSMDQIEQALTKIKSTLRATGEREVKSEMIGNLMMDHLVNLD
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHH
KVAYIRFASVYRAFEDVSEFGDAIAKLQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHCPFCSATDTKVIDSRLVADGHQVRRRRECVQCHERFTTFEGAELVMPRVVKQDGSRQP
CCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
FDEEKLRGGMLRAVEKRPVSMDQIEQALTKIKSTLRATGEREVKSEMIGNLMMDHLVNLD
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHH
KVAYIRFASVYRAFEDVSEFGDAIAKLQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA