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The map label for this gene is ppdD [C]

Identifier: 167623073

GI number: 167623073

Start: 1384562

End: 1384951

Strand: Direct

Name: ppdD [C]

Synonym: Shal_1139

Alternate gene names: 167623073

Gene position: 1384562-1384951 (Clockwise)

Preceding gene: 167623072

Following gene: 167623074

Centisome position: 26.49

GC content: 45.13

Gene sequence:

>390_bases
ATGCATAAAACAAGAGGTTTTACCTTAATTGAGCTGATGATTGTGGTTGCTATCGTGGGGATCTTGGCGTCTATTGCTTA
TCCTTCCTATATTGATTATGTGACAAAGAGTGCTCGTTCAGAAGGCGTTGCGGCAGTATTGAGAGTGGCTAATCTTCAAG
AGCAGTATTACTTGGATAATCGCGCTTTTGCTACGGATTTGAAGAAGCTTGGACTTAGCGCTAGCCCATTTATTACTGAA
AGTGGCCACTACAGTATTGCTTCTGCTGGTACTGCTGCTTTCACCATCACCGCGACAGCAATAGGCGCACAAGCTAGTCG
AGACTCGACTTGCGCTACGATAACTCTGACTCATGCGGGTATTAAGGGTCCATCAAAGGAGTGTTGGTAA

Upstream 100 bases:

>100_bases
AAGGGGAGTGCGAAAATGGCGAGTGTAAAGGAACCGTTGAGCTTGGTAGTGGTTTAACGACTAATCGAATCTATTACCAT
TTGGATGAGAGTAATTAGTA

Downstream 100 bases:

>100_bases
TGATAAGGCTTAAATATTTGTTTTTGACTAGTGCAGCGGCGCTGTTATTTCCGACCTCCCAAGCGCTTGCTGTTGAATAT
CAAGAATACAAGTGCCATGT

Product: methylation site containing protein

Products: NA

Alternate protein names: Methylation Site Containing Protein; Type 4 Fimbrial Biogenesis Protein PilE; General Secretion Pathway Protein H; Methylation; Type 4 Fimbrial Biogenesis Transmembrane Protein; Fimbrial Protein; Pilus Assembly Protein; Type IV Pilin; Pilus Assembly Protein PilE; Tfp Pilus Assembly Protein PilE-Like Protein; Type IV Pilus Assembly Protein

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MHKTRGFTLIELMIVVAIVGILASIAYPSYIDYVTKSARSEGVAAVLRVANLQEQYYLDNRAFATDLKKLGLSASPFITE
SGHYSIASAGTAAFTITATAIGAQASRDSTCATITLTHAGIKGPSKECW

Sequences:

>Translated_129_residues
MHKTRGFTLIELMIVVAIVGILASIAYPSYIDYVTKSARSEGVAAVLRVANLQEQYYLDNRAFATDLKKLGLSASPFITE
SGHYSIASAGTAAFTITATAIGAQASRDSTCATITLTHAGIKGPSKECW
>Mature_129_residues
MHKTRGFTLIELMIVVAIVGILASIAYPSYIDYVTKSARSEGVAAVLRVANLQEQYYLDNRAFATDLKKLGLSASPFITE
SGHYSIASAGTAAFTITATAIGAQASRDSTCATITLTHAGIKGPSKECW

Specific function: Not Yet Known. [C]

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13690; Mature: 13690

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKTRGFTLIELMIVVAIVGILASIAYPSYIDYVTKSARSEGVAAVLRVANLQEQYYLDN
CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
RAFATDLKKLGLSASPFITESGHYSIASAGTAAFTITATAIGAQASRDSTCATITLTHAG
CHHHHHHHHHCCCCCCCEECCCCEEEECCCCEEEEEEEHHHCCCCCCCCCEEEEEEEECC
IKGPSKECW
CCCCCCCCC
>Mature Secondary Structure
MHKTRGFTLIELMIVVAIVGILASIAYPSYIDYVTKSARSEGVAAVLRVANLQEQYYLDN
CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
RAFATDLKKLGLSASPFITESGHYSIASAGTAAFTITATAIGAQASRDSTCATITLTHAG
CHHHHHHHHHCCCCCCCEECCCCEEEECCCCEEEEEEEHHHCCCCCCCCCEEEEEEEECC
IKGPSKECW
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA