| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is pgi
Identifier: 167623055
GI number: 167623055
Start: 1360100
End: 1361737
Strand: Reverse
Name: pgi
Synonym: Shal_1121
Alternate gene names: 167623055
Gene position: 1361737-1360100 (Counterclockwise)
Preceding gene: 167623056
Following gene: 167623054
Centisome position: 26.05
GC content: 44.14
Gene sequence:
>1638_bases ATGACTGAACTCACTCAACAAGCCACTTGGCAAGCATTAGAAAAGCACAGTAAAACGCTTTCCCATATGCGCGAGCTATT TAGCACAGAACCTCAGCGTTTTAATGACATGTCGACTCAGGCCTGTGGATTGTTTCTAGATTACTCTAAAAACCGCGCCT CACAAGAGACGATGTCTCTTTTATTTAAGCTGGCGAAAGACACTCAGCTTGAATCAAAAATTAAGGCGATGTTTGCTGGA GAAGCAATCAACAACACAGAACAAAGAGCGGTACTACACACGGCTCTTCGTGCACCAGCAGACAAAGTTATTATTGTCGA TGGCAATAATATTGTCGCCGAGGTTCAGCAAACACTGGCAAAAATGAGTGAGTTCGTCGAGTCGCTTACATCCGGAAGCT GGAAAGGCTACACAGGTAAAGCCATTACTGACGTCGTCAGTATCGGTATTGGCGGCTCTTTCTTAGGGCCTAAAATCGTT TCTCAAGCATTGCGTCCATATTGGACGGGTGAGCTAAATTGCCATTTTGTGGCAAATGTTGATGGAACCTCTATCACTGA AAAACTAAAAGGCCTAGACCCGCAAACCACCTTGTTTGTGATGTCTTCTAAATCTTTTGGTACTCAAGAAACGTTAACCA ATACGCTTACCGCTAAAGCGTGGTTTTTAGGACAAGGTGCATCACAATCTGATGTTGCTAAGCACTTTGTCGCTGTGAGC TCAAATGTCGCTAAGGCAACGGAGTTTGGTATCGATGCCGATAACATCTTCCCTATGTGGGACTGGGTCGGTGGTCGCTA TTCACTTTGGTCTGCAATTGGATTACCTATCGCTCTGCTAATCGGTATGGATAACTTTCGCGAGTTATTAGCCGGTGCTC ATGAGATGGATGAACACTTTGCCAATACTCCATTAGAAGACAATATGCCCGTTATTATGGGCTTATTCTCACTATGGTAT GGTAATTTTTTCAATGCTCAGTCTCATGTAGTGTTAACTTATGATCATTACCTAAGAGGCCTGCCAGCTTACTTTCAGCA GCTAGATATGGAGAGTAACGGTAAGTCTGTCACCCTAAATGGTACCGATGTTGATTACAGCACTGGACCTGTAATTTGGG GCGGCGAAGGAACTAACGGTCAACACGCATACCACCAGCTATTGCATCAAGGAACGGCACTCATTCCAGCCGACTTCATT ATGCCACTCAACAGCCACAACCCGGTGGGTGAGCATCATGTTCAACTTGCTTCAAACTGCTTTGGTCAAACCCAAGCATT GATGCAAGGTAGAACCTATGAAGAAGCATTAGCAGAGTTAAGCTCTAGTAGCCTTAACGATGAGCAGAAGCAACTTATCG CTAAACATAAGGTGATGCCGGGTAATAAGCCGAGCAATACCATCTTAATGGATAAGCTTACTCCTTCAACGTTAGGTGCA TTAATTGCTCTATATGAACACAGAACATTTGTTCAAGGTGCTATTTGGCAGATTAACTCATTTGATCAGTGGGGAGTCGA GCTTGGTAAGCAACTAGGCAACGATGTTCTCGATCGCCTCACGGCAAGTAAAGATGCCGATGAGCTCGACACTTCTAGTA ATGGTTTGATTAACCTGTTTAGGCAAGGAAATATCTAA
Upstream 100 bases:
>100_bases GAAAAGCTTGCTGAAGGTATTCGCAACTTCGCTATCGACCAAGGTAAGCTTGAAGTTATGCTAAAAAACAAACTTTCGTC TTAATCAATAGGACAAAAAA
Downstream 100 bases:
>100_bases GCTCGTACTCAAGCTATAAAAAAGCCAGTTTCTACTGGCTTTTTTGTTTTTTACAGCCAAGCATTCCATATAGCTTAAAA AAAAGACCATATTTATCTCA
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI
Number of amino acids: Translated: 545; Mature: 544
Protein sequence:
>545_residues MTELTQQATWQALEKHSKTLSHMRELFSTEPQRFNDMSTQACGLFLDYSKNRASQETMSLLFKLAKDTQLESKIKAMFAG EAINNTEQRAVLHTALRAPADKVIIVDGNNIVAEVQQTLAKMSEFVESLTSGSWKGYTGKAITDVVSIGIGGSFLGPKIV SQALRPYWTGELNCHFVANVDGTSITEKLKGLDPQTTLFVMSSKSFGTQETLTNTLTAKAWFLGQGASQSDVAKHFVAVS SNVAKATEFGIDADNIFPMWDWVGGRYSLWSAIGLPIALLIGMDNFRELLAGAHEMDEHFANTPLEDNMPVIMGLFSLWY GNFFNAQSHVVLTYDHYLRGLPAYFQQLDMESNGKSVTLNGTDVDYSTGPVIWGGEGTNGQHAYHQLLHQGTALIPADFI MPLNSHNPVGEHHVQLASNCFGQTQALMQGRTYEEALAELSSSSLNDEQKQLIAKHKVMPGNKPSNTILMDKLTPSTLGA LIALYEHRTFVQGAIWQINSFDQWGVELGKQLGNDVLDRLTASKDADELDTSSNGLINLFRQGNI
Sequences:
>Translated_545_residues MTELTQQATWQALEKHSKTLSHMRELFSTEPQRFNDMSTQACGLFLDYSKNRASQETMSLLFKLAKDTQLESKIKAMFAG EAINNTEQRAVLHTALRAPADKVIIVDGNNIVAEVQQTLAKMSEFVESLTSGSWKGYTGKAITDVVSIGIGGSFLGPKIV SQALRPYWTGELNCHFVANVDGTSITEKLKGLDPQTTLFVMSSKSFGTQETLTNTLTAKAWFLGQGASQSDVAKHFVAVS SNVAKATEFGIDADNIFPMWDWVGGRYSLWSAIGLPIALLIGMDNFRELLAGAHEMDEHFANTPLEDNMPVIMGLFSLWY GNFFNAQSHVVLTYDHYLRGLPAYFQQLDMESNGKSVTLNGTDVDYSTGPVIWGGEGTNGQHAYHQLLHQGTALIPADFI MPLNSHNPVGEHHVQLASNCFGQTQALMQGRTYEEALAELSSSSLNDEQKQLIAKHKVMPGNKPSNTILMDKLTPSTLGA LIALYEHRTFVQGAIWQINSFDQWGVELGKQLGNDVLDRLTASKDADELDTSSNGLINLFRQGNI >Mature_544_residues TELTQQATWQALEKHSKTLSHMRELFSTEPQRFNDMSTQACGLFLDYSKNRASQETMSLLFKLAKDTQLESKIKAMFAGE AINNTEQRAVLHTALRAPADKVIIVDGNNIVAEVQQTLAKMSEFVESLTSGSWKGYTGKAITDVVSIGIGGSFLGPKIVS QALRPYWTGELNCHFVANVDGTSITEKLKGLDPQTTLFVMSSKSFGTQETLTNTLTAKAWFLGQGASQSDVAKHFVAVSS NVAKATEFGIDADNIFPMWDWVGGRYSLWSAIGLPIALLIGMDNFRELLAGAHEMDEHFANTPLEDNMPVIMGLFSLWYG NFFNAQSHVVLTYDHYLRGLPAYFQQLDMESNGKSVTLNGTDVDYSTGPVIWGGEGTNGQHAYHQLLHQGTALIPADFIM PLNSHNPVGEHHVQLASNCFGQTQALMQGRTYEEALAELSSSSLNDEQKQLIAKHKVMPGNKPSNTILMDKLTPSTLGAL IALYEHRTFVQGAIWQINSFDQWGVELGKQLGNDVLDRLTASKDADELDTSSNGLINLFRQGNI
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family
Homologues:
Organism=Homo sapiens, GI18201905, Length=551, Percent_Identity=50.9981851179673, Blast_Score=583, Evalue=1e-166, Organism=Homo sapiens, GI296080693, Length=551, Percent_Identity=47.3684210526316, Blast_Score=528, Evalue=1e-150, Organism=Escherichia coli, GI1790457, Length=540, Percent_Identity=53.5185185185185, Blast_Score=597, Evalue=1e-172, Organism=Caenorhabditis elegans, GI71996708, Length=547, Percent_Identity=52.8336380255942, Blast_Score=585, Evalue=1e-167, Organism=Caenorhabditis elegans, GI71996703, Length=547, Percent_Identity=52.8336380255942, Blast_Score=584, Evalue=1e-167, Organism=Saccharomyces cerevisiae, GI6319673, Length=550, Percent_Identity=50.9090909090909, Blast_Score=543, Evalue=1e-155, Organism=Drosophila melanogaster, GI24651916, Length=551, Percent_Identity=52.4500907441016, Blast_Score=579, Evalue=1e-165, Organism=Drosophila melanogaster, GI24651914, Length=551, Percent_Identity=52.4500907441016, Blast_Score=579, Evalue=1e-165, Organism=Drosophila melanogaster, GI17737445, Length=551, Percent_Identity=52.4500907441016, Blast_Score=579, Evalue=1e-165,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): G6PI_SHEHH (B0TJ99)
Other databases:
- EMBL: CP000931 - RefSeq: YP_001673349.1 - ProteinModelPortal: B0TJ99 - SMR: B0TJ99 - GeneID: 5905720 - GenomeReviews: CP000931_GR - KEGG: shl:Shal_1121 - HOGENOM: HBG352954 - OMA: GPKIVSQ - ProtClustDB: PRK00179 - BioCyc: SHAL458817:SHAL_1121-MONOMER - GO: GO:0005737 - GO: GO:0006094 - GO: GO:0006096 - HAMAP: MF_00473 - InterPro: IPR001672 - InterPro: IPR023096 - InterPro: IPR018189 - Gene3D: G3DSA:1.10.1390.10 - PANTHER: PTHR11469 - PRINTS: PR00662
Pfam domain/function: PF00342 PGI
EC number: =5.3.1.9
Molecular weight: Translated: 59983; Mature: 59852
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1; PS00174 P_GLUCOSE_ISOMERASE_2; PS51463 P_GLUCOSE_ISOMERASE_3
Important sites: ACT_SITE 351-351 ACT_SITE 382-382 ACT_SITE 510-510
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELTQQATWQALEKHSKTLSHMRELFSTEPQRFNDMSTQACGLFLDYSKNRASQETMSL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHEEEECCCCCCHHHHHHH LFKLAKDTQLESKIKAMFAGEAINNTEQRAVLHTALRAPADKVIIVDGNNIVAEVQQTLA HHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH KMSEFVESLTSGSWKGYTGKAITDVVSIGIGGSFLGPKIVSQALRPYWTGELNCHFVANV HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECC DGTSITEKLKGLDPQTTLFVMSSKSFGTQETLTNTLTAKAWFLGQGASQSDVAKHFVAVS CCCHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHH SNVAKATEFGIDADNIFPMWDWVGGRYSLWSAIGLPIALLIGMDNFRELLAGAHEMDEHF CCHHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH ANTPLEDNMPVIMGLFSLWYGNFFNAQSHVVLTYDHYLRGLPAYFQQLDMESNGKSVTLN CCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEHHHHHCCHHHHHHHHCCCCCCCEEEEC GTDVDYSTGPVIWGGEGTNGQHAYHQLLHQGTALIPADFIMPLNSHNPVGEHHVQLASNC CCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCHHHEEECCCCCCCCHHHHHHHHHH FGQTQALMQGRTYEEALAELSSSSLNDEQKQLIAKHKVMPGNKPSNTILMDKLTPSTLGA HHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHH LIALYEHRTFVQGAIWQINSFDQWGVELGKQLGNDVLDRLTASKDADELDTSSNGLINLF HHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCEEEE RQGNI ECCCC >Mature Secondary Structure TELTQQATWQALEKHSKTLSHMRELFSTEPQRFNDMSTQACGLFLDYSKNRASQETMSL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHEEEECCCCCCHHHHHHH LFKLAKDTQLESKIKAMFAGEAINNTEQRAVLHTALRAPADKVIIVDGNNIVAEVQQTLA HHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH KMSEFVESLTSGSWKGYTGKAITDVVSIGIGGSFLGPKIVSQALRPYWTGELNCHFVANV HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECC DGTSITEKLKGLDPQTTLFVMSSKSFGTQETLTNTLTAKAWFLGQGASQSDVAKHFVAVS CCCHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHH SNVAKATEFGIDADNIFPMWDWVGGRYSLWSAIGLPIALLIGMDNFRELLAGAHEMDEHF CCHHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH ANTPLEDNMPVIMGLFSLWYGNFFNAQSHVVLTYDHYLRGLPAYFQQLDMESNGKSVTLN CCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEHHHHHCCHHHHHHHHCCCCCCCEEEEC GTDVDYSTGPVIWGGEGTNGQHAYHQLLHQGTALIPADFIMPLNSHNPVGEHHVQLASNC CCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCHHHEEECCCCCCCCHHHHHHHHHH FGQTQALMQGRTYEEALAELSSSSLNDEQKQLIAKHKVMPGNKPSNTILMDKLTPSTLGA HHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHH LIALYEHRTFVQGAIWQINSFDQWGVELGKQLGNDVLDRLTASKDADELDTSSNGLINLF HHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCEEEE RQGNI ECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA