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The map label for this gene is 167623043

Identifier: 167623043

GI number: 167623043

Start: 1349030

End: 1349722

Strand: Direct

Name: 167623043

Synonym: Shal_1109

Alternate gene names: NA

Gene position: 1349030-1349722 (Clockwise)

Preceding gene: 167623040

Following gene: 167623045

Centisome position: 25.81

GC content: 45.31

Gene sequence:

>693_bases
ATGGAACAAAATCTGGTCAAAGTTAAAGTGTGGGATATTCCGACTCGTCTTTTCCATTGGGGCATGCTGTGCTTACTCGG
AGGATTGTGGTGGACTGCAGATGCCGGTGAGATGGAATGGCACCAACTCTTGGCTTATATGCTGATGGTGTTTATTGTCG
TCAGGATCATCTGGGGTCTAGTCGGTAGCGATACGGCACGCTTTAGTCACTTTGTACGCTCACCAAAAACCGTTATTAAC
TACCTTGGTAGGGCCCGGCGCGAAGGGATTTCATCATCAATAGGCCATAATCCTGTTGGCGGATATATGGTGGTAGCCCT
TATCACATTGGTCAGTGTTCAGCTTACTACAGGGTTATTCGCCACCGATGAGATCTTCACAGAAGGCCCACTCTATTCAG
CGGTTAGCTCTGATACCGCAGGCTGGCTAACTTGGCTACATAAGAAGAACTTTGATCTTATTTTACTCTTAGCTGTTGTG
CATGTATTTGCTGTCGGTGTGCATATGATTAAAGGCGATAAGATCCTAGGTGCTATGTTTAGTGGCTATAAGAAGTTACC
TGAATCTAAGTTGGGTGGGACTAACCCTAATCAGCTTCAATTTGCTTCTGTATTTAAGGCGCTTGTTTTAACCGTGATAA
TCGGGGCGATGGTGCTAAATTACTTGATGCTACCAGTTATCGACATGCTGTAG

Upstream 100 bases:

>100_bases
TTCTAGCAAAAATTCTAGTGTAAATAACTCGATAGCCCTCCTGTCATTCCCCGTTTATAATGGCCTCTTTGAATAAATTA
ATTTTCAAGAGTGACCGAAC

Downstream 100 bases:

>100_bases
TTTATCGAAGATAAAATTAAGCCTGTCTGATGACAGGCTTAATCTGATTTAACTAATCAAAATATTAGTCTTTTTTATAA
GCATCGTGGCAGCTTTTACA

Product: cytochrome B561

Products: NA

Alternate protein names: Cytochrome; Hydrogenase Cytochrome B-Type Subunit; Nickel-Dependent Hydrogenase B-Type Cytochrome Subunit; B-Type Cytochrome; Cytochrome B/B6 Domain; Hydrogenase Cytochrome B-Type; Hydrogenase Cytochrome B-Type Subunit Protein; Integral Membrane Protein; Cytochrome C Family Protein; Nickel-Dependent Hydrogenase; Ni/Fe-Hydrogenase 1 B-Type Cytochrome Subunit

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MEQNLVKVKVWDIPTRLFHWGMLCLLGGLWWTADAGEMEWHQLLAYMLMVFIVVRIIWGLVGSDTARFSHFVRSPKTVIN
YLGRARREGISSSIGHNPVGGYMVVALITLVSVQLTTGLFATDEIFTEGPLYSAVSSDTAGWLTWLHKKNFDLILLLAVV
HVFAVGVHMIKGDKILGAMFSGYKKLPESKLGGTNPNQLQFASVFKALVLTVIIGAMVLNYLMLPVIDML

Sequences:

>Translated_230_residues
MEQNLVKVKVWDIPTRLFHWGMLCLLGGLWWTADAGEMEWHQLLAYMLMVFIVVRIIWGLVGSDTARFSHFVRSPKTVIN
YLGRARREGISSSIGHNPVGGYMVVALITLVSVQLTTGLFATDEIFTEGPLYSAVSSDTAGWLTWLHKKNFDLILLLAVV
HVFAVGVHMIKGDKILGAMFSGYKKLPESKLGGTNPNQLQFASVFKALVLTVIIGAMVLNYLMLPVIDML
>Mature_230_residues
MEQNLVKVKVWDIPTRLFHWGMLCLLGGLWWTADAGEMEWHQLLAYMLMVFIVVRIIWGLVGSDTARFSHFVRSPKTVIN
YLGRARREGISSSIGHNPVGGYMVVALITLVSVQLTTGLFATDEIFTEGPLYSAVSSDTAGWLTWLHKKNFDLILLLAVV
HVFAVGVHMIKGDKILGAMFSGYKKLPESKLGGTNPNQLQFASVFKALVLTVIIGAMVLNYLMLPVIDML

Specific function: Unknown

COG id: COG3658

COG function: function code C; Cytochrome b

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25567; Mature: 25567

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQNLVKVKVWDIPTRLFHWGMLCLLGGLWWTADAGEMEWHQLLAYMLMVFIVVRIIWGL
CCCCEEEEEEECCHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VGSDTARFSHFVRSPKTVINYLGRARREGISSSIGHNPVGGYMVVALITLVSVQLTTGLF
HCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCH
ATDEIFTEGPLYSAVSSDTAGWLTWLHKKNFDLILLLAVVHVFAVGVHMIKGDKILGAMF
HHHHHHHCCCHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SGYKKLPESKLGGTNPNQLQFASVFKALVLTVIIGAMVLNYLMLPVIDML
HHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MEQNLVKVKVWDIPTRLFHWGMLCLLGGLWWTADAGEMEWHQLLAYMLMVFIVVRIIWGL
CCCCEEEEEEECCHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VGSDTARFSHFVRSPKTVINYLGRARREGISSSIGHNPVGGYMVVALITLVSVQLTTGLF
HCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCH
ATDEIFTEGPLYSAVSSDTAGWLTWLHKKNFDLILLLAVVHVFAVGVHMIKGDKILGAMF
HHHHHHHCCCHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SGYKKLPESKLGGTNPNQLQFASVFKALVLTVIIGAMVLNYLMLPVIDML
HHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA