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The map label for this gene is napC [H]

Identifier: 167623026

GI number: 167623026

Start: 1330861

End: 1331427

Strand: Direct

Name: napC [H]

Synonym: Shal_1092

Alternate gene names: 167623026

Gene position: 1330861-1331427 (Clockwise)

Preceding gene: 167623025

Following gene: 167623027

Centisome position: 25.46

GC content: 44.44

Gene sequence:

>567_bases
GTGAATAACAAAGGGGAAAGAACTCGGTGGCAACGGCTTTGGAGCTGGTTAAAGCGACCTTTAGCTTTGGGGATCCCTAT
CGGAGTGTTTCTAATGGTAATGGGAGCAGCATCGTTTCAAGGAATGATGGTGGCATCAAACCAAAACGCTTTCTGTTTTA
GTTGTCACCTGAAGATGGATACGATTGTGCAGGAGTATAAGGCGTCATCCCACTATGGTGATGGGGAAACGATTCCAGCC
ACCTGCTCAGATTGTCATGTGCCTCATCCTTTTGTCGATAAGATGATCGTCAAGACCATCGCGCTTAAGGATGTATATCA
TATGATGGTAGGTACCATCACCGAGGAAAATTTTGAAGAACATAGACCCGCTATGGCAGAGAATGTTTGGAAAGATTTCA
AGAAGAACGACTCTGCTAACTGTCGCGAATGTCATCAAGGTGAAAACTTTGATTTAGCCAAGCAACCACAAAGGGCGCGA
CTGAATCATGAAAAGATAGCGGCAAGAGGTGAAACCTGTATTGATTGTCATCAAGGGTTAACCCATAAACGGATCGTTAT
ACGCTAA

Upstream 100 bases:

>100_bases
CCCAGAAAGAGTTTAAAGCTCGCTATCTAAGTGAAAGTAACTAGCAACCGAGCAAGGGGGTGTTAATCACCTCCTTCCTC
CCCCAATTGAGGAGACTCTA

Downstream 100 bases:

>100_bases
GTTAGACCGTGAACTGACAAGTTCGCATAGATTCAAAAAAGCTCTTCTCCAGTAAAGGCCGCCTCCCACTTGCGGCCTTT
TTATTTTGTTTCACTACACG

Product: NapC/NirT cytochrome c domain-containing protein

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MNNKGERTRWQRLWSWLKRPLALGIPIGVFLMVMGAASFQGMMVASNQNAFCFSCHLKMDTIVQEYKASSHYGDGETIPA
TCSDCHVPHPFVDKMIVKTIALKDVYHMMVGTITEENFEEHRPAMAENVWKDFKKNDSANCRECHQGENFDLAKQPQRAR
LNHEKIAARGETCIDCHQGLTHKRIVIR

Sequences:

>Translated_188_residues
MNNKGERTRWQRLWSWLKRPLALGIPIGVFLMVMGAASFQGMMVASNQNAFCFSCHLKMDTIVQEYKASSHYGDGETIPA
TCSDCHVPHPFVDKMIVKTIALKDVYHMMVGTITEENFEEHRPAMAENVWKDFKKNDSANCRECHQGENFDLAKQPQRAR
LNHEKIAARGETCIDCHQGLTHKRIVIR
>Mature_188_residues
MNNKGERTRWQRLWSWLKRPLALGIPIGVFLMVMGAASFQGMMVASNQNAFCFSCHLKMDTIVQEYKASSHYGDGETIPA
TCSDCHVPHPFVDKMIVKTIALKDVYHMMVGTITEENFEEHRPAMAENVWKDFKKNDSANCRECHQGENFDLAKQPQRAR
LNHEKIAARGETCIDCHQGLTHKRIVIR

Specific function: Mediates electron flow from quinones to the NapAB complex [H]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788530, Length=178, Percent_Identity=43.2584269662921, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI1788181, Length=145, Percent_Identity=42.0689655172414, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1787230, Length=187, Percent_Identity=37.4331550802139, Blast_Score=114, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011031
- InterPro:   IPR005126
- InterPro:   IPR011885 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 21521; Mature: 21521

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKGERTRWQRLWSWLKRPLALGIPIGVFLMVMGAASFQGMMVASNQNAFCFSCHLKMD
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCEEEEEECHHH
TIVQEYKASSHYGDGETIPATCSDCHVPHPFVDKMIVKTIALKDVYHMMVGTITEENFEE
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRPAMAENVWKDFKKNDSANCRECHQGENFDLAKQPQRARLNHEKIAARGETCIDCHQGL
HCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHCCHHHHHHCCCHHHHHHCCC
THKRIVIR
CCCEEEEC
>Mature Secondary Structure
MNNKGERTRWQRLWSWLKRPLALGIPIGVFLMVMGAASFQGMMVASNQNAFCFSCHLKMD
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCEEEEEECHHH
TIVQEYKASSHYGDGETIPATCSDCHVPHPFVDKMIVKTIALKDVYHMMVGTITEENFEE
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRPAMAENVWKDFKKNDSANCRECHQGENFDLAKQPQRARLNHEKIAARGETCIDCHQGL
HCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHCCHHHHHHCCCHHHHHHCCC
THKRIVIR
CCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]