Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623009

Identifier: 167623009

GI number: 167623009

Start: 1314035

End: 1314451

Strand: Direct

Name: 167623009

Synonym: Shal_1075

Alternate gene names: NA

Gene position: 1314035-1314451 (Clockwise)

Preceding gene: 167623008

Following gene: 167623011

Centisome position: 25.14

GC content: 45.56

Gene sequence:

>417_bases
GTGGACGTCCAGCAGCATAGTTTCGATGTTTGCTCCTCTTTCGGTCAGCGTTTTTCGCTGACCGTTATCGCCTTTGTTTG
TTTAAGCTCTTTCTTTATCTGGCCTTACGCCGAAAACACCCTCTATATTTTGTTCAAAGGGCTGCTGTTCATCACTTGCT
GTGTTTTTTTTGTCTGGCAACTCTGGCGTTTAAAAGAGTGGCGTTGTCGCTTCGTTTTACGAGCCGATGGCGTTGGTAAA
CTTGAGGGTAATGTGGATTTCGCTCTGATAGGAAAACCGGTCATTACGCCTTTTGCTGTTATGTTTGATATTAGCTTAGC
GAAGCAAAGTAGAAGGTTAGTGGTGTGGGCTGATATGCTAGACGACACAAACTTCCGGCATTTGTGTCGTCTACTTCAGT
TAGCCAGCCAGAGGTGA

Upstream 100 bases:

>100_bases
GTTAAACTTCTCGAGTGTGAAGACCCTGAACTATTTGCTTGGTTTATGGGCCATGAAGTATGCCCAACCCCGGCGTTTGC
CGAAATGATTATCAAGGTCC

Downstream 100 bases:

>100_bases
AAGGCTAATGACTATGGTTAGCGACTAGGGCTAATCGGGCTGTAGAATAGTAGGCTTTGGTGATGCATCCTTGTTTGGAT
GATCAATGTTGTAATGTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MDVQQHSFDVCSSFGQRFSLTVIAFVCLSSFFIWPYAENTLYILFKGLLFITCCVFFVWQLWRLKEWRCRFVLRADGVGK
LEGNVDFALIGKPVITPFAVMFDISLAKQSRRLVVWADMLDDTNFRHLCRLLQLASQR

Sequences:

>Translated_138_residues
MDVQQHSFDVCSSFGQRFSLTVIAFVCLSSFFIWPYAENTLYILFKGLLFITCCVFFVWQLWRLKEWRCRFVLRADGVGK
LEGNVDFALIGKPVITPFAVMFDISLAKQSRRLVVWADMLDDTNFRHLCRLLQLASQR
>Mature_138_residues
MDVQQHSFDVCSSFGQRFSLTVIAFVCLSSFFIWPYAENTLYILFKGLLFITCCVFFVWQLWRLKEWRCRFVLRADGVGK
LEGNVDFALIGKPVITPFAVMFDISLAKQSRRLVVWADMLDDTNFRHLCRLLQLASQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16129; Mature: 16129

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVQQHSFDVCSSFGQRFSLTVIAFVCLSSFFIWPYAENTLYILFKGLLFITCCVFFVWQ
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LWRLKEWRCRFVLRADGVGKLEGNVDFALIGKPVITPFAVMFDISLAKQSRRLVVWADML
HHHHHHHHHEEEEECCCCCEECCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECC
DDTNFRHLCRLLQLASQR
CCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MDVQQHSFDVCSSFGQRFSLTVIAFVCLSSFFIWPYAENTLYILFKGLLFITCCVFFVWQ
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LWRLKEWRCRFVLRADGVGKLEGNVDFALIGKPVITPFAVMFDISLAKQSRRLVVWADML
HHHHHHHHHEEEEECCCCCEECCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECC
DDTNFRHLCRLLQLASQR
CCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA