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The map label for this gene is 167622990

Identifier: 167622990

GI number: 167622990

Start: 1288200

End: 1289417

Strand: Reverse

Name: 167622990

Synonym: Shal_1056

Alternate gene names: NA

Gene position: 1289417-1288200 (Counterclockwise)

Preceding gene: 167622991

Following gene: 167622989

Centisome position: 24.67

GC content: 46.14

Gene sequence:

>1218_bases
ATGACCACTTGGCTGACTATAGGAATATTATTTACGTTCGCCGCCATCGCCTTCGTGATCTACCGCTGGGGTAACGTCAA
GTGTGTAGGCGTCACACCGGTGCGCACCTTTACCTTTATCGCCATCCTGTTTACCTCAGGTTTGGATGTGGGTTTAATCA
TGTTCCCACTAACCGAGTTTGCTGGTTACGCAGACTTAAGCGCGAGCCCCGAGTATGGCTTTACTAATCCATTAGCGATT
GAGTTTGGTTTCTGGGCATTTTTAATCTGGGCATTTTACTTCTTAACCTGCTTCTATTTTTGTGTGATAGAGCCTAGGGT
CAAGTTCTTCGAGATCCCAGTCATTAAGTTCATTAATAACTTAGTGATTATCGGCACCTGTGCCTTCACCGCTTATCTGC
TATTGACCAACTTACCTTGGTACCTGCCAGAGATGGGTGATGGCGAGTCAGTGGTGAGCAGCTTCTACCTAATTGTGTTC
GTGATTATCGCCGCTGCCGTGTACTCAAGTACTAGCATCCGTTATGTGCGCATTCTGAGCTTAGCTAGCACTTGGTTATT
CCTAGGCTTAATCGTGTTGATGTGGGCTGGCGCATTTATGTCAAAAGAGTCAGGTATGGGTGAGTTCGTTAACACCTTCT
CCCTGATCGGTGATTACTTTGGCAATATCCATCACTTCGTCCTGCCGATGAATGATTACCATGAGTTTTACCTATTTTGG
TGGTTCGCTTGGAGCATCATGATTGGTCAGTTCACTTCACGCTTTGTGGGCGGTATGAAGACCTATCAAGTACTGATTGC
CATGATGGTATTTCCGTCCTTGCCTATCGCCGTGTGGTTTACGGTACTGTACTACTACAGCGCAAATGAAATCGCCACTA
CAGGCTTCTATAACCTCGCGATGGTGATGGTAGGCGTTACCTTCGTGGTTAACTCGCTCGACTCGTTAATTCGTCTCTAT
ACCGACAACCTAAACCTAACCGTTGAGCGCTTCGGCAAGACTAAATACATCATTGGTAACCTCGCCTTAATGAGTGGTCT
CACCCTGCTGTTCCAGCTGAATTTCTTAGAGATCCAGTGGGTTGGCGCACTGGCTATCGGCCTCATCTTAGGCTGCTTCG
GTTACATCTTAGCGACTAAATATAAGAAAGTGGCCGCGATTGAGCACTCACCAACAGAAAACAAAATCGACTTTAGCAAA
ATTGAATTAGCTAACTAA

Upstream 100 bases:

>100_bases
AAATTTGACTGCAAGCGGGCATAACTAAAATAAAAACAAGGACTAAAAGCATGCTTTTTAATAAAAAGGTTTGTACTCAG
AATACGCTAGGAGCTCAACT

Downstream 100 bases:

>100_bases
AAAGAAGAAAGGAAAATGATGAAAACAACAATTAAAAATCTTGCGCTACTGGGCCTCATCGCATTGCCAACAACGGCAAT
GGCTAACGTGAGCTCAACGA

Product: putative BCCT family protein transporter

Products: NA

Alternate protein names: QuateRNAry Ammonium Permease; BCCT Family Transporter; Choline-Glycine Betaine Transporter-Like Protein

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MTTWLTIGILFTFAAIAFVIYRWGNVKCVGVTPVRTFTFIAILFTSGLDVGLIMFPLTEFAGYADLSASPEYGFTNPLAI
EFGFWAFLIWAFYFLTCFYFCVIEPRVKFFEIPVIKFINNLVIIGTCAFTAYLLLTNLPWYLPEMGDGESVVSSFYLIVF
VIIAAAVYSSTSIRYVRILSLASTWLFLGLIVLMWAGAFMSKESGMGEFVNTFSLIGDYFGNIHHFVLPMNDYHEFYLFW
WFAWSIMIGQFTSRFVGGMKTYQVLIAMMVFPSLPIAVWFTVLYYYSANEIATTGFYNLAMVMVGVTFVVNSLDSLIRLY
TDNLNLTVERFGKTKYIIGNLALMSGLTLLFQLNFLEIQWVGALAIGLILGCFGYILATKYKKVAAIEHSPTENKIDFSK
IELAN

Sequences:

>Translated_405_residues
MTTWLTIGILFTFAAIAFVIYRWGNVKCVGVTPVRTFTFIAILFTSGLDVGLIMFPLTEFAGYADLSASPEYGFTNPLAI
EFGFWAFLIWAFYFLTCFYFCVIEPRVKFFEIPVIKFINNLVIIGTCAFTAYLLLTNLPWYLPEMGDGESVVSSFYLIVF
VIIAAAVYSSTSIRYVRILSLASTWLFLGLIVLMWAGAFMSKESGMGEFVNTFSLIGDYFGNIHHFVLPMNDYHEFYLFW
WFAWSIMIGQFTSRFVGGMKTYQVLIAMMVFPSLPIAVWFTVLYYYSANEIATTGFYNLAMVMVGVTFVVNSLDSLIRLY
TDNLNLTVERFGKTKYIIGNLALMSGLTLLFQLNFLEIQWVGALAIGLILGCFGYILATKYKKVAAIEHSPTENKIDFSK
IELAN
>Mature_404_residues
TTWLTIGILFTFAAIAFVIYRWGNVKCVGVTPVRTFTFIAILFTSGLDVGLIMFPLTEFAGYADLSASPEYGFTNPLAIE
FGFWAFLIWAFYFLTCFYFCVIEPRVKFFEIPVIKFINNLVIIGTCAFTAYLLLTNLPWYLPEMGDGESVVSSFYLIVFV
IIAAAVYSSTSIRYVRILSLASTWLFLGLIVLMWAGAFMSKESGMGEFVNTFSLIGDYFGNIHHFVLPMNDYHEFYLFWW
FAWSIMIGQFTSRFVGGMKTYQVLIAMMVFPSLPIAVWFTVLYYYSANEIATTGFYNLAMVMVGVTFVVNSLDSLIRLYT
DNLNLTVERFGKTKYIIGNLALMSGLTLLFQLNFLEIQWVGALAIGLILGCFGYILATKYKKVAAIEHSPTENKIDFSKI
ELAN

Specific function: Unknown

COG id: COG1292

COG function: function code M; Choline-glycine betaine transporter

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45901; Mature: 45770

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTWLTIGILFTFAAIAFVIYRWGNVKCVGVTPVRTFTFIAILFTSGLDVGLIMFPLTEF
CCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AGYADLSASPEYGFTNPLAIEFGFWAFLIWAFYFLTCFYFCVIEPRVKFFEIPVIKFINN
CCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECHHHHHHCC
LVIIGTCAFTAYLLLTNLPWYLPEMGDGESVVSSFYLIVFVIIAAAVYSSTSIRYVRILS
EEEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LASTWLFLGLIVLMWAGAFMSKESGMGEFVNTFSLIGDYFGNIHHFVLPMNDYHEFYLFW
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH
WFAWSIMIGQFTSRFVGGMKTYQVLIAMMVFPSLPIAVWFTVLYYYSANEIATTGFYNLA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
MVMVGVTFVVNSLDSLIRLYTDNLNLTVERFGKTKYIIGNLALMSGLTLLFQLNFLEIQW
HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEHHHHHHHHHHHHHHHEECHHEEEH
VGALAIGLILGCFGYILATKYKKVAAIEHSPTENKIDFSKIELAN
HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHEEECC
>Mature Secondary Structure 
TTWLTIGILFTFAAIAFVIYRWGNVKCVGVTPVRTFTFIAILFTSGLDVGLIMFPLTEF
CHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AGYADLSASPEYGFTNPLAIEFGFWAFLIWAFYFLTCFYFCVIEPRVKFFEIPVIKFINN
CCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECHHHHHHCC
LVIIGTCAFTAYLLLTNLPWYLPEMGDGESVVSSFYLIVFVIIAAAVYSSTSIRYVRILS
EEEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LASTWLFLGLIVLMWAGAFMSKESGMGEFVNTFSLIGDYFGNIHHFVLPMNDYHEFYLFW
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH
WFAWSIMIGQFTSRFVGGMKTYQVLIAMMVFPSLPIAVWFTVLYYYSANEIATTGFYNLA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
MVMVGVTFVVNSLDSLIRLYTDNLNLTVERFGKTKYIIGNLALMSGLTLLFQLNFLEIQW
HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEHHHHHHHHHHHHHHHEECHHEEEH
VGALAIGLILGCFGYILATKYKKVAAIEHSPTENKIDFSKIELAN
HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA