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The map label for this gene is cadC [C]

Identifier: 167622976

GI number: 167622976

Start: 1274069

End: 1276219

Strand: Direct

Name: cadC [C]

Synonym: Shal_1042

Alternate gene names: 167622976

Gene position: 1274069-1276219 (Clockwise)

Preceding gene: 167622970

Following gene: 167622979

Centisome position: 24.38

GC content: 46.77

Gene sequence:

>2151_bases
ATGCTTGATATAAGGAAAGAGGCGTTATTTAAGCTTGGCCAGTGTGAGGTTAATCCCAGTGATAATAGCCTGAACTTTTA
TGATACAGACGCTGATAACGGCTCCTGTCAAAAAGTTTCAATTCAGCCTAAATTTATCGAGGTGTTAAGTTATCTAGCAC
GGCAATACCCCAAAGTAGTCACCCGAGAGGAGTTAATCGACAATATTTGGGAGGGCAATAGCTACGTGGGAAGTAAAGCG
CTAACCAATGCCATCTGGCATCTGCGTAAGCAGCTCAATCAGCGGACGGATGCTGAACAAGCTATCGAGACGGTGCGTAA
GATGGGGTACCGTTTACTGGTTGAGCCTGAGTTTAATGATGCGGATCTGGTCGATGAGCCAGATCTATTCCAGCAAGCAC
AGCTTAAAATCAAGCATCTAACTCGGTTTAATCGAAGGCTTACCCTAGCGGGTGGATTATTTATCGGTGTGATTTCAGTA
GCTTTAGGGTATCACCTCTATCAAGACAGTATTCGTTATGTCCCCACCACCAAGCAAAACTTAACCACGGAAGCTGGCTC
AGAGCTTTACCCTGCGGTTTCTCCCGATGGTCGCTGGCTGGTTTATGGTAGCCGTGGCAGTAACAAGTACGCCAGTCTTT
ATCTTAAAGATTTGCAAAACCCAGCCGAAACCCCTAAGCGACTCACCTCGACTAAGACTGCCGAGCTCAGAGCCGTATGG
AGTCCTGATGGTAGCGCACTGTATTACGGCTCTGAACATAGGAGCGAAGATAAGTGTTACCTGACTAAACTCAATCTAGA
CAGTAATGAAGCCCTTAAGTTAGGTGAGTGTTACACCTACAGCTCGGCGATTGATATCGCCCCTGATGCAAGCCGGCTAG
TGTATATCTGGGATGGCGCAGAGGGGTTTGGCTCCGGCCTCTATGAGTTGTCTCTTACTATAGAGGGAGAGAAGCCCAAG
CGCTTATCTTGTACTGAAAACTGTAGCTATCGTGACCGTGATATCGCCTTCAGTCCCAATGGCAGCTGGCTCGCGGTTGC
ACGGCGTTTTGGTAATATCTCCGAAGATATCTTTATTCGGCATACAGAAACGCAAGAGGAGCAGCGCTTAACCTTTGGTT
TAGAGGATATTCGCGGCCTTAGCTGGCATCAAGATAGTGAGCGGCTGATCTTTAGCACCGAAAACTCTGGTGTGCGAAAT
GGCTATATTGTTGGGATTGATGACAAACAGATCCAGCCGCTAGAAGTGGAGGGCATGAGTTACCCGCGCTCTATTCCTAA
CAGCGATGAGTTGGTGTACTCCAACTATATTCGTGACTATCATGTGGCCTCTTTTGCGTTAGAGCAATCTATCCCTACCG
CCACTTTTCCACTATTGCAGGTAGAGTACAGTTACCGAAATCCCGATTACTCATCAATCACCCAGCGTATCGTCTATGTG
TCCAATGAAACAGGCTTCAATGAAATTTGGTCCAGTGACACTGATGGCAGTCAAAGGCGGCAGCATACCGACCTTAAGCG
CCGAGTGGCCTATCCTAGTTGGTCCCATGATGGCACTAAGGTGGCATTTCTAGCCCCCGATGATAAAAATGAGGGCAATA
AAATTCACGTGCTGGATATGAAGACCTCCAACATCAGCATTCTTGCGACCCCTTATCTGGATCACAATCGTCCTAGTTGG
GGGTGGAATGATGAGATGGTACTAGCGAGCAGTAAAGACGGCATTACCGAGTTTTATCTGGATAACCGTTTGCCTAAGGT
GATTAGCCCAATCGACATGCGTCTTGGTAAGATGATAGCCGAAGATAAGTTAGTCTTTACTCTGCTCGGGAAGAACGGTT
TATGGTTGTTGTCGCTAGCAAGCCCAGAACAGCCTAGTGAACTGATTAGTGCTAACCATTTTGGTGAAGGATATAACTGG
GTGGCAACCGATAAAGGTGTTTACTTTAGAACGAGCCGCAGTGGTTATCAGCTGATTAACTTTTGGCGTTTTAATACAGG
GCTTATCACGCCTATTTTGAAGTTACCTTCGGGCAGTATTCCCCGTTCGGGTGCCATGACCTATATGGGCAGTAATAACA
GCTTGCTGATGACCTTATCGCGAAATTACAAACGTGATGTGATAAAGCTGCAGCATAAGTTATTGTATTAG

Upstream 100 bases:

>100_bases
TGGTGGTGGGTTGAACTCTTTGTCTATGTTAAAAAGATGTGGCGCTCCGTGCTGGTGATGGATACCGATATAAAAAAGAT
AAATAAAAAATGGGATCAGG

Downstream 100 bases:

>100_bases
AGGATTGGCGTCCACTGTTGCAGCTGAAATGTCACTAGGGGCTTAAAGCAGGATTAGCCAGTAATGTGAGTTATTACTGA
CTAATGATATCGGGCTAATG

Product: winged helix family two component response transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator CadC; Transcriptional Regulator Domain-Containing Protein; Transcriptional Regulatory Protein-Like; LB Domain Protein; LB Domain-Containing Protein; Peptidase S9B Dipeptidylpeptidase IV Subunit; Transcriptional Regulatory Protein-Like Protein

Number of amino acids: Translated: 716; Mature: 716

Protein sequence:

>716_residues
MLDIRKEALFKLGQCEVNPSDNSLNFYDTDADNGSCQKVSIQPKFIEVLSYLARQYPKVVTREELIDNIWEGNSYVGSKA
LTNAIWHLRKQLNQRTDAEQAIETVRKMGYRLLVEPEFNDADLVDEPDLFQQAQLKIKHLTRFNRRLTLAGGLFIGVISV
ALGYHLYQDSIRYVPTTKQNLTTEAGSELYPAVSPDGRWLVYGSRGSNKYASLYLKDLQNPAETPKRLTSTKTAELRAVW
SPDGSALYYGSEHRSEDKCYLTKLNLDSNEALKLGECYTYSSAIDIAPDASRLVYIWDGAEGFGSGLYELSLTIEGEKPK
RLSCTENCSYRDRDIAFSPNGSWLAVARRFGNISEDIFIRHTETQEEQRLTFGLEDIRGLSWHQDSERLIFSTENSGVRN
GYIVGIDDKQIQPLEVEGMSYPRSIPNSDELVYSNYIRDYHVASFALEQSIPTATFPLLQVEYSYRNPDYSSITQRIVYV
SNETGFNEIWSSDTDGSQRRQHTDLKRRVAYPSWSHDGTKVAFLAPDDKNEGNKIHVLDMKTSNISILATPYLDHNRPSW
GWNDEMVLASSKDGITEFYLDNRLPKVISPIDMRLGKMIAEDKLVFTLLGKNGLWLLSLASPEQPSELISANHFGEGYNW
VATDKGVYFRTSRSGYQLINFWRFNTGLITPILKLPSGSIPRSGAMTYMGSNNSLLMTLSRNYKRDVIKLQHKLLY

Sequences:

>Translated_716_residues
MLDIRKEALFKLGQCEVNPSDNSLNFYDTDADNGSCQKVSIQPKFIEVLSYLARQYPKVVTREELIDNIWEGNSYVGSKA
LTNAIWHLRKQLNQRTDAEQAIETVRKMGYRLLVEPEFNDADLVDEPDLFQQAQLKIKHLTRFNRRLTLAGGLFIGVISV
ALGYHLYQDSIRYVPTTKQNLTTEAGSELYPAVSPDGRWLVYGSRGSNKYASLYLKDLQNPAETPKRLTSTKTAELRAVW
SPDGSALYYGSEHRSEDKCYLTKLNLDSNEALKLGECYTYSSAIDIAPDASRLVYIWDGAEGFGSGLYELSLTIEGEKPK
RLSCTENCSYRDRDIAFSPNGSWLAVARRFGNISEDIFIRHTETQEEQRLTFGLEDIRGLSWHQDSERLIFSTENSGVRN
GYIVGIDDKQIQPLEVEGMSYPRSIPNSDELVYSNYIRDYHVASFALEQSIPTATFPLLQVEYSYRNPDYSSITQRIVYV
SNETGFNEIWSSDTDGSQRRQHTDLKRRVAYPSWSHDGTKVAFLAPDDKNEGNKIHVLDMKTSNISILATPYLDHNRPSW
GWNDEMVLASSKDGITEFYLDNRLPKVISPIDMRLGKMIAEDKLVFTLLGKNGLWLLSLASPEQPSELISANHFGEGYNW
VATDKGVYFRTSRSGYQLINFWRFNTGLITPILKLPSGSIPRSGAMTYMGSNNSLLMTLSRNYKRDVIKLQHKLLY
>Mature_716_residues
MLDIRKEALFKLGQCEVNPSDNSLNFYDTDADNGSCQKVSIQPKFIEVLSYLARQYPKVVTREELIDNIWEGNSYVGSKA
LTNAIWHLRKQLNQRTDAEQAIETVRKMGYRLLVEPEFNDADLVDEPDLFQQAQLKIKHLTRFNRRLTLAGGLFIGVISV
ALGYHLYQDSIRYVPTTKQNLTTEAGSELYPAVSPDGRWLVYGSRGSNKYASLYLKDLQNPAETPKRLTSTKTAELRAVW
SPDGSALYYGSEHRSEDKCYLTKLNLDSNEALKLGECYTYSSAIDIAPDASRLVYIWDGAEGFGSGLYELSLTIEGEKPK
RLSCTENCSYRDRDIAFSPNGSWLAVARRFGNISEDIFIRHTETQEEQRLTFGLEDIRGLSWHQDSERLIFSTENSGVRN
GYIVGIDDKQIQPLEVEGMSYPRSIPNSDELVYSNYIRDYHVASFALEQSIPTATFPLLQVEYSYRNPDYSSITQRIVYV
SNETGFNEIWSSDTDGSQRRQHTDLKRRVAYPSWSHDGTKVAFLAPDDKNEGNKIHVLDMKTSNISILATPYLDHNRPSW
GWNDEMVLASSKDGITEFYLDNRLPKVISPIDMRLGKMIAEDKLVFTLLGKNGLWLLSLASPEQPSELISANHFGEGYNW
VATDKGVYFRTSRSGYQLINFWRFNTGLITPILKLPSGSIPRSGAMTYMGSNNSLLMTLSRNYKRDVIKLQHKLLY

Specific function: Required For Pcad Induction, A Promoter Upstream Of Cadb That Is Responsible For The Ph-Regulated Expression Of Cada. [C]

COG id: COG3710

COG function: function code K; DNA-binding winged-HTH domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81417; Mature: 81417

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDIRKEALFKLGQCEVNPSDNSLNFYDTDADNGSCQKVSIQPKFIEVLSYLARQYPKVV
CCCCCHHHHHHCCCEEECCCCCCCEEEECCCCCCCEEEEECCHHHHHHHHHHHHHCCHHH
TREELIDNIWEGNSYVGSKALTNAIWHLRKQLNQRTDAEQAIETVRKMGYRLLVEPEFND
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCC
ADLVDEPDLFQQAQLKIKHLTRFNRRLTLAGGLFIGVISVALGYHLYQDSIRYVPTTKQN
CCCCCCCHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHCCEEECCCCCHH
LTTEAGSELYPAVSPDGRWLVYGSRGSNKYASLYLKDLQNPAETPKRLTSTKTAELRAVW
CCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEHHHHHCCHHHHHHHHHCCCCEEEEEEE
SPDGSALYYGSEHRSEDKCYLTKLNLDSNEALKLGECYTYSSAIDIAPDASRLVYIWDGA
CCCCCEEEECCCCCCCCCEEEEEECCCCCCCEEECCEEEECCEEECCCCCCEEEEEEECC
EGFGSGLYELSLTIEGEKPKRLSCTENCSYRDRDIAFSPNGSWLAVARRFGNISEDIFIR
CCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEHHHCCCCCCEEEE
HTETQEEQRLTFGLEDIRGLSWHQDSERLIFSTENSGVRNGYIVGIDDKQIQPLEVEGMS
ECCCCCHHHHEECHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCEEECCCC
YPRSIPNSDELVYSNYIRDYHVASFALEQSIPTATFPLLQVEYSYRNPDYSSITQRIVYV
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHCEEEEEE
SNETGFNEIWSSDTDGSQRRQHTDLKRRVAYPSWSHDGTKVAFLAPDDKNEGNKIHVLDM
ECCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEEE
KTSNISILATPYLDHNRPSWGWNDEMVLASSKDGITEFYLDNRLPKVISPIDMRLGKMIA
ECCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEHHCCCCHHHHCHHHHHHHHHHH
EDKLVFTLLGKNGLWLLSLASPEQPSELISANHFGEGYNWVATDKGVYFRTSRSGYQLIN
CCCEEEEEECCCCEEEEEECCCCCCHHHHHHCCCCCCCEEEEECCCEEEEECCCCCEEEE
FWRFNTGLITPILKLPSGSIPRSGAMTYMGSNNSLLMTLSRNYKRDVIKLQHKLLY
EEEECCCCCHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLDIRKEALFKLGQCEVNPSDNSLNFYDTDADNGSCQKVSIQPKFIEVLSYLARQYPKVV
CCCCCHHHHHHCCCEEECCCCCCCEEEECCCCCCCEEEEECCHHHHHHHHHHHHHCCHHH
TREELIDNIWEGNSYVGSKALTNAIWHLRKQLNQRTDAEQAIETVRKMGYRLLVEPEFND
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCC
ADLVDEPDLFQQAQLKIKHLTRFNRRLTLAGGLFIGVISVALGYHLYQDSIRYVPTTKQN
CCCCCCCHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHCCEEECCCCCHH
LTTEAGSELYPAVSPDGRWLVYGSRGSNKYASLYLKDLQNPAETPKRLTSTKTAELRAVW
CCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEHHHHHCCHHHHHHHHHCCCCEEEEEEE
SPDGSALYYGSEHRSEDKCYLTKLNLDSNEALKLGECYTYSSAIDIAPDASRLVYIWDGA
CCCCCEEEECCCCCCCCCEEEEEECCCCCCCEEECCEEEECCEEECCCCCCEEEEEEECC
EGFGSGLYELSLTIEGEKPKRLSCTENCSYRDRDIAFSPNGSWLAVARRFGNISEDIFIR
CCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEHHHCCCCCCEEEE
HTETQEEQRLTFGLEDIRGLSWHQDSERLIFSTENSGVRNGYIVGIDDKQIQPLEVEGMS
ECCCCCHHHHEECHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCEEECCCC
YPRSIPNSDELVYSNYIRDYHVASFALEQSIPTATFPLLQVEYSYRNPDYSSITQRIVYV
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHCEEEEEE
SNETGFNEIWSSDTDGSQRRQHTDLKRRVAYPSWSHDGTKVAFLAPDDKNEGNKIHVLDM
ECCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEEE
KTSNISILATPYLDHNRPSWGWNDEMVLASSKDGITEFYLDNRLPKVISPIDMRLGKMIA
ECCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCEEEHHCCCCHHHHCHHHHHHHHHHH
EDKLVFTLLGKNGLWLLSLASPEQPSELISANHFGEGYNWVATDKGVYFRTSRSGYQLIN
CCCEEEEEECCCCEEEEEECCCCCCHHHHHHCCCCCCCEEEEECCCEEEEECCCCCEEEE
FWRFNTGLITPILKLPSGSIPRSGAMTYMGSNNSLLMTLSRNYKRDVIKLQHKLLY
EEEECCCCCHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA