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The map label for this gene is uspF [C]

Identifier: 167622942

GI number: 167622942

Start: 1233304

End: 1233735

Strand: Reverse

Name: uspF [C]

Synonym: Shal_1003

Alternate gene names: 167622942

Gene position: 1233735-1233304 (Counterclockwise)

Preceding gene: 167622943

Following gene: 167622931

Centisome position: 23.6

GC content: 45.14

Gene sequence:

>432_bases
ATGCGAACTAAGCAGATCCTTTGTCCCACTGACTTTTCGGAGACTGCATCTCACGCAATAAGCTATGCCATCGAAATGGC
AAACTTTTATAACGTTGGGATCTGTCTTTTACATGTTGTCGATAAACCCTTTGGCGATAAATACACTCGCGTCTTAGCAG
AGACCCCCGATGAACTAATCGAAAGAATGGAAAAAGAGGCTGCCGAGAAGATGAAGCAATTTATCGCAACACTCGATGAG
ACTCTGTCTTTTGATACAGCTATTTGCCATGGCCATCCTGTTGAACAAATTTTATCGACCGCAGAAAAGGTGGATGCAGG
TATGATCGTTATGGCTAGCCATGGCCGGAAAGGACTTGATCACTTTTTGAATTCCAATACTACCGAAGAGGTGGCCTGCA
AAGCCCACTGCCCAGTGCTAGTCGTCAAGTAG

Upstream 100 bases:

>100_bases
TTAATGTAGCGAGCATTTAGCGCTACGCTATAAGTGGTTTAATCTATGTTATCAGTGCTATCACCCTCGAATTTCAACCT
GTATTCAACAGGAGAATGTT

Downstream 100 bases:

>100_bases
TGCAATTAGAAAGTAAAAAATCCGAGACCAAAAACGGCTCTCGGATTTCCGCACGCATTATACTCAGCCCACCTTTTACT
GATGATGCCAATTGGTATTA

Product: UspA domain-containing protein

Products: NA

Alternate protein names: USP MJ0531 [H]

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MRTKQILCPTDFSETASHAISYAIEMANFYNVGICLLHVVDKPFGDKYTRVLAETPDELIERMEKEAAEKMKQFIATLDE
TLSFDTAICHGHPVEQILSTAEKVDAGMIVMASHGRKGLDHFLNSNTTEEVACKAHCPVLVVK

Sequences:

>Translated_143_residues
MRTKQILCPTDFSETASHAISYAIEMANFYNVGICLLHVVDKPFGDKYTRVLAETPDELIERMEKEAAEKMKQFIATLDE
TLSFDTAICHGHPVEQILSTAEKVDAGMIVMASHGRKGLDHFLNSNTTEEVACKAHCPVLVVK
>Mature_143_residues
MRTKQILCPTDFSETASHAISYAIEMANFYNVGICLLHVVDKPFGDKYTRVLAETPDELIERMEKEAAEKMKQFIATLDE
TLSFDTAICHGHPVEQILSTAEKVDAGMIVMASHGRKGLDHFLNSNTTEEVACKAHCPVLVVK

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 15898; Mature: 15898

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTKQILCPTDFSETASHAISYAIEMANFYNVGICLLHVVDKPFGDKYTRVLAETPDELI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHH
ERMEKEAAEKMKQFIATLDETLSFDTAICHGHPVEQILSTAEKVDAGMIVMASHGRKGLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCHHHH
HFLNSNTTEEVACKAHCPVLVVK
HHHCCCCHHHHHHHCCCCEEEEC
>Mature Secondary Structure
MRTKQILCPTDFSETASHAISYAIEMANFYNVGICLLHVVDKPFGDKYTRVLAETPDELI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHH
ERMEKEAAEKMKQFIATLDETLSFDTAICHGHPVEQILSTAEKVDAGMIVMASHGRKGLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCHHHH
HFLNSNTTEEVACKAHCPVLVVK
HHHCCCCHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]