Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622920

Identifier: 167622920

GI number: 167622920

Start: 1208143

End: 1209060

Strand: Direct

Name: 167622920

Synonym: Shal_0981

Alternate gene names: NA

Gene position: 1208143-1209060 (Clockwise)

Preceding gene: 167622916

Following gene: 167622926

Centisome position: 23.11

GC content: 46.19

Gene sequence:

>918_bases
GTGAACTATTTAAAGACTTACCTCAAGGGAATGGCGATGGGCGCAGCCGATGTTGTTCCTGGGGTATCTGGCGGCACGAT
CGCCTTTATTACGGCGATTCTTGACCCGTTATTGGAAAGTATCAAAAAAATTAGACCCTCTTTACTGGGCGTGATTAAAG
AGCAGGGCATTAAAGCGGCTTTCATGCATATTAATGGTCCATTCCTAGTCTGTGTATTCGGTGGGATCTTGACCAGTATT
CTCAGTCTGGCCAAATTGATCACTTATTTACTGGACACTCATCCAATTCCCGTGTGGTCATTCTTTTTCGGCCTGATCTT
GATCTCAGTGATTCATATGCTCAAGCAAGTGAAGGGCTTTACCTTAGGACGCTTGGTTTTGTTTGCCTTGGGGGCGGTGT
TTGCGTGGGGGATTACCATGCTCAACCCTATAGCGCTTGAGATGACCTATCTCAACGTGTTCTTAGGCGGCTGTATTGCG
ATCACTGCGATGATCCTACCGGGTATTTCGGGTAGCTTTATCTTGCTACTTCTTGGTTTATACACGCCAGTGATTGGCGC
CGTTAAGAATTTTGATATCGCCATTATGGCCACCTTTGCGGCGGGTGCAGCAATAGGCATACTCTGTTTTAGTCACGTAC
TGTCGGCATTACTTAGAAAGTACCATGATGCGACACTGATGTTTTTAATTGGTTTGATGCTCGGCACTTTAGGTAAGATC
TGGCCATGGAAAGAGGTGATGACTTTTCGCGAAAACTCAAAAGGACAAATGGTGCCACTCGATGAGCGTGTACTATCACC
AATGCAGTATGAGCATATTACCGGTCAACCTTCGCTGTTGATGTATGCGGTTATCGCTATGTTTGCCGGTATTTTATTGG
TATGGGGCCTAGAGCGTTTCGCGCAAAAGAGCCGCTAA

Upstream 100 bases:

>100_bases
GGTTAATTAACCTTTATAAACGTAAACTTCATTTCCTTTCTTATAGGGTTGGAACGTATAATTTTGCCGGCGAGTAGTTT
TGAGTAAATTAAGGAATAAA

Downstream 100 bases:

>100_bases
TACTTTTTATACCAGTCGGTATAAGTACGTATTTACAATGCCAGCTTACGAGCTGGCATTTTTTTGGCTGTAGGTTGTAG
ATAGAAATGCGTAATTGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MNYLKTYLKGMAMGAADVVPGVSGGTIAFITAILDPLLESIKKIRPSLLGVIKEQGIKAAFMHINGPFLVCVFGGILTSI
LSLAKLITYLLDTHPIPVWSFFFGLILISVIHMLKQVKGFTLGRLVLFALGAVFAWGITMLNPIALEMTYLNVFLGGCIA
ITAMILPGISGSFILLLLGLYTPVIGAVKNFDIAIMATFAAGAAIGILCFSHVLSALLRKYHDATLMFLIGLMLGTLGKI
WPWKEVMTFRENSKGQMVPLDERVLSPMQYEHITGQPSLLMYAVIAMFAGILLVWGLERFAQKSR

Sequences:

>Translated_305_residues
MNYLKTYLKGMAMGAADVVPGVSGGTIAFITAILDPLLESIKKIRPSLLGVIKEQGIKAAFMHINGPFLVCVFGGILTSI
LSLAKLITYLLDTHPIPVWSFFFGLILISVIHMLKQVKGFTLGRLVLFALGAVFAWGITMLNPIALEMTYLNVFLGGCIA
ITAMILPGISGSFILLLLGLYTPVIGAVKNFDIAIMATFAAGAAIGILCFSHVLSALLRKYHDATLMFLIGLMLGTLGKI
WPWKEVMTFRENSKGQMVPLDERVLSPMQYEHITGQPSLLMYAVIAMFAGILLVWGLERFAQKSR
>Mature_305_residues
MNYLKTYLKGMAMGAADVVPGVSGGTIAFITAILDPLLESIKKIRPSLLGVIKEQGIKAAFMHINGPFLVCVFGGILTSI
LSLAKLITYLLDTHPIPVWSFFFGLILISVIHMLKQVKGFTLGRLVLFALGAVFAWGITMLNPIALEMTYLNVFLGGCIA
ITAMILPGISGSFILLLLGLYTPVIGAVKNFDIAIMATFAAGAAIGILCFSHVLSALLRKYHDATLMFLIGLMLGTLGKI
WPWKEVMTFRENSKGQMVPLDERVLSPMQYEHITGQPSLLMYAVIAMFAGILLVWGLERFAQKSR

Specific function: Unknown

COG id: COG2035

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33215; Mature: 33215

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYLKTYLKGMAMGAADVVPGVSGGTIAFITAILDPLLESIKKIRPSLLGVIKEQGIKAA
CCHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
FMHINGPFLVCVFGGILTSILSLAKLITYLLDTHPIPVWSFFFGLILISVIHMLKQVKGF
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
TLGRLVLFALGAVFAWGITMLNPIALEMTYLNVFLGGCIAITAMILPGISGSFILLLLGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
YTPVIGAVKNFDIAIMATFAAGAAIGILCFSHVLSALLRKYHDATLMFLIGLMLGTLGKI
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
WPWKEVMTFRENSKGQMVPLDERVLSPMQYEHITGQPSLLMYAVIAMFAGILLVWGLERF
CCHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AQKSR
HHCCC
>Mature Secondary Structure
MNYLKTYLKGMAMGAADVVPGVSGGTIAFITAILDPLLESIKKIRPSLLGVIKEQGIKAA
CCHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
FMHINGPFLVCVFGGILTSILSLAKLITYLLDTHPIPVWSFFFGLILISVIHMLKQVKGF
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
TLGRLVLFALGAVFAWGITMLNPIALEMTYLNVFLGGCIAITAMILPGISGSFILLLLGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
YTPVIGAVKNFDIAIMATFAAGAAIGILCFSHVLSALLRKYHDATLMFLIGLMLGTLGKI
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
WPWKEVMTFRENSKGQMVPLDERVLSPMQYEHITGQPSLLMYAVIAMFAGILLVWGLERF
CCHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AQKSR
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA