BacMap

Definition	Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession	NC_010334
Length	5,226,917

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The map label for this gene is rhlE [H]

Identifier: 167622895

GI number: 167622895

Start: 1176681

End: 1177922

Strand: Direct

Name: rhlE [H]

Synonym: Shal_0955

Alternate gene names: 167622895

Gene position: 1176681-1177922 (Clockwise)

Preceding gene: 167622892

Following gene: 167622897

Centisome position: 22.51

GC content: 49.11

Gene sequence:

>1242_bases
ATGAATTTTACTGACCTTAAGCTTTCAGCCACAATTGTTGACCACTTACCTGCTAATTTGACTGCTGCAACCGAAATACA
AGGGTTAGCGATACCTGAAGTATTAGCGGGAAGAGATCTGCTTGCATTGGCGCAAACGGGCAGCGGTAAAACCTATGCCT
TTGGCCTGCCACTGCTGCAAACTATCATCAATGATGCTGTCGAGTCGCGGGAAGTTAAGGCGCTAGTTCTGGTTCCAACT
CGGGAGCTGGCACTGCAAGTCGCTGAGGCGCTTAAGCTGGTGTCGGCTAGCACAGAGATAACCGTATTATGCGGTGGAGT
CGATAAGGCTGAGCAACTTAAAGAGCTTGAGCAAGGCCCTCAACTTATCGTGGCGACACCTGGACGACTGCTGGACTTGT
TGCGTCAGCAACAGCTCTCACTTAAGTCGGTAAAACAGCTGGTGCTCGATGAAGCGGATAGGCTGATGGAAATGGGCTTT
TGGCCTGACATCGAACGTATACTTGAGTTTGTGCCCGCTAAACGCCAAACCTTATTGTTTTCGGCAACCCTTGCGCCAGA
ACTTAATGACAAGGCGCTTAAGCTATTACATAACCCCAAAAAGATTGCTGCCCAAGCGGTTAATAGTGTGGTGGCGGATA
TCAATGAGTCGCTTTACATAGTTAACAAGGGCGATAAGGCGAGGGCATTAATTGCCTTAATAAAACAGCATAAGTGGTCA
CAGGTATTGGTGTTTATTAATGGACGAGATGACGCCGATAAACTCGCCAAGAGGTTAGTTAAAGCGGATATTAATGCGAT
GGCCTTACATGGTGATAAAGAGCATCAGCAAAGACAACAAACACTGGAGGCCTTTAAGGCCTGTGAGCTGCAGGTGTTAG
TGACTACTGACTTGTTGTCTCGTGGCATTCATATCGATGCACTGCCTGTGGTGATCAATATCGACTTGCCAAGTAGTGCT
CCAGTCTATGTGCACCGCATTGGCCGCACCGCGAGAGCAGGCGATAACGGCATAGCGATATCGCTGGTGTGTCATGGTGA
GGCTGATAACCTAAAGGCGATTCAGCTGTTAACTGGGCGAGAGCTTGAACTTGAGGCTCTTGGCGGGTTTGAGGTGACGG
ATCAGCCGTCATCGGGTGAGAGAAAAAGGGCTCCACGGGACAAGAAGGCAAACAGGCGCAGCCAGAATAAGCGCAGCGCC
AAAGACTTTGCCGCTAAACGGACAAAATTTCCCGCTAAATAA

Upstream 100 bases:

>100_bases
AGCGGATTTTTAGGAGTGAATTTGGGCTTTGCAGTGGCTATTTTACTATTGCGCTGCCTGCGGTTAAACTTCGCGTCTGT
TCTGCTACCAGCCTGCTACC

Downstream 100 bases:

>100_bases
TCAGTTTAAAATAGCGGTCTAGATTGGAAAATAGGACTCCCTTGTCGCGGTTGTTTTTAATCATCGGCAAGGCCTAAATG
AGTTGATTTAACATCTCTGC

Product: DEAD/DEAH box helicase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MNFTDLKLSATIVDHLPANLTAATEIQGLAIPEVLAGRDLLALAQTGSGKTYAFGLPLLQTIINDAVESREVKALVLVPT
RELALQVAEALKLVSASTEITVLCGGVDKAEQLKELEQGPQLIVATPGRLLDLLRQQQLSLKSVKQLVLDEADRLMEMGF
WPDIERILEFVPAKRQTLLFSATLAPELNDKALKLLHNPKKIAAQAVNSVVADINESLYIVNKGDKARALIALIKQHKWS
QVLVFINGRDDADKLAKRLVKADINAMALHGDKEHQQRQQTLEAFKACELQVLVTTDLLSRGIHIDALPVVINIDLPSSA
PVYVHRIGRTARAGDNGIAISLVCHGEADNLKAIQLLTGRELELEALGGFEVTDQPSSGERKRAPRDKKANRRSQNKRSA
KDFAAKRTKFPAK

Sequences:

>Translated_413_residues
MNFTDLKLSATIVDHLPANLTAATEIQGLAIPEVLAGRDLLALAQTGSGKTYAFGLPLLQTIINDAVESREVKALVLVPT
RELALQVAEALKLVSASTEITVLCGGVDKAEQLKELEQGPQLIVATPGRLLDLLRQQQLSLKSVKQLVLDEADRLMEMGF
WPDIERILEFVPAKRQTLLFSATLAPELNDKALKLLHNPKKIAAQAVNSVVADINESLYIVNKGDKARALIALIKQHKWS
QVLVFINGRDDADKLAKRLVKADINAMALHGDKEHQQRQQTLEAFKACELQVLVTTDLLSRGIHIDALPVVINIDLPSSA
PVYVHRIGRTARAGDNGIAISLVCHGEADNLKAIQLLTGRELELEALGGFEVTDQPSSGERKRAPRDKKANRRSQNKRSA
KDFAAKRTKFPAK
>Mature_413_residues
MNFTDLKLSATIVDHLPANLTAATEIQGLAIPEVLAGRDLLALAQTGSGKTYAFGLPLLQTIINDAVESREVKALVLVPT
RELALQVAEALKLVSASTEITVLCGGVDKAEQLKELEQGPQLIVATPGRLLDLLRQQQLSLKSVKQLVLDEADRLMEMGF
WPDIERILEFVPAKRQTLLFSATLAPELNDKALKLLHNPKKIAAQAVNSVVADINESLYIVNKGDKARALIALIKQHKWS
QVLVFINGRDDADKLAKRLVKADINAMALHGDKEHQQRQQTLEAFKACELQVLVTTDLLSRGIHIDALPVVINIDLPSSA
PVYVHRIGRTARAGDNGIAISLVCHGEADNLKAIQLLTGRELELEALGGFEVTDQPSSGERKRAPRDKKANRRSQNKRSA
KDFAAKRTKFPAK

Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI262118318, Length=364, Percent_Identity=36.5384615384615, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI262231852, Length=357, Percent_Identity=36.4145658263305, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI13518015, Length=357, Percent_Identity=36.4145658263305, Blast_Score=234, Evalue=2e-61,
Organism=Homo sapiens, GI216548263, Length=357, Percent_Identity=36.4145658263305, Blast_Score=234, Evalue=2e-61,
Organism=Homo sapiens, GI20149629, Length=345, Percent_Identity=35.9420289855072, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI87196351, Length=365, Percent_Identity=37.8082191780822, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI301171475, Length=365, Percent_Identity=37.8082191780822, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI301171467, Length=365, Percent_Identity=37.8082191780822, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI31542656, Length=374, Percent_Identity=38.5026737967914, Blast_Score=221, Evalue=8e-58,
Organism=Homo sapiens, GI169881239, Length=365, Percent_Identity=37.5342465753425, Blast_Score=219, Evalue=3e-57,
Organism=Homo sapiens, GI13514809, Length=365, Percent_Identity=37.5342465753425, Blast_Score=219, Evalue=3e-57,
Organism=Homo sapiens, GI41327773, Length=345, Percent_Identity=36.231884057971, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI4758138, Length=366, Percent_Identity=34.9726775956284, Blast_Score=216, Evalue=4e-56,
Organism=Homo sapiens, GI148613856, Length=342, Percent_Identity=35.9649122807018, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI38201710, Length=342, Percent_Identity=35.9649122807018, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI21071032, Length=356, Percent_Identity=35.3932584269663, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI41327771, Length=355, Percent_Identity=34.6478873239437, Blast_Score=208, Evalue=6e-54,
Organism=Homo sapiens, GI222352149, Length=330, Percent_Identity=36.3636363636364, Blast_Score=208, Evalue=6e-54,
Organism=Homo sapiens, GI224593278, Length=361, Percent_Identity=34.9030470914127, Blast_Score=205, Evalue=8e-53,
Organism=Homo sapiens, GI188035877, Length=326, Percent_Identity=38.3435582822086, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI7661920, Length=335, Percent_Identity=31.6417910447761, Blast_Score=203, Evalue=2e-52,
Organism=Homo sapiens, GI45446747, Length=337, Percent_Identity=34.4213649851632, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI45446743, Length=337, Percent_Identity=34.4213649851632, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI41327776, Length=365, Percent_Identity=33.4246575342466, Blast_Score=195, Evalue=6e-50,
Organism=Homo sapiens, GI55749865, Length=336, Percent_Identity=33.9285714285714, Blast_Score=192, Evalue=7e-49,
Organism=Homo sapiens, GI51094101, Length=368, Percent_Identity=34.5108695652174, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI164419743, Length=368, Percent_Identity=34.5108695652174, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI164664518, Length=341, Percent_Identity=33.1378299120235, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI41327779, Length=344, Percent_Identity=36.046511627907, Blast_Score=185, Evalue=8e-47,
Organism=Homo sapiens, GI21040371, Length=326, Percent_Identity=31.5950920245399, Blast_Score=182, Evalue=7e-46,
Organism=Homo sapiens, GI38569503, Length=354, Percent_Identity=35.5932203389831, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI38569505, Length=354, Percent_Identity=35.5932203389831, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI83700235, Length=367, Percent_Identity=32.1525885558583, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI4503529, Length=369, Percent_Identity=32.2493224932249, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI4758112, Length=326, Percent_Identity=30.6748466257669, Blast_Score=175, Evalue=7e-44,
Organism=Homo sapiens, GI18375623, Length=326, Percent_Identity=30.6748466257669, Blast_Score=175, Evalue=7e-44,
Organism=Homo sapiens, GI50659095, Length=375, Percent_Identity=30.4, Blast_Score=172, Evalue=4e-43,
Organism=Homo sapiens, GI38327634, Length=331, Percent_Identity=32.6283987915408, Blast_Score=172, Evalue=4e-43,
Organism=Homo sapiens, GI13514831, Length=357, Percent_Identity=32.2128851540616, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI13129006, Length=380, Percent_Identity=31.0526315789474, Blast_Score=162, Evalue=4e-40,
Organism=Homo sapiens, GI256223453, Length=363, Percent_Identity=30.0275482093664, Blast_Score=155, Evalue=5e-38,
Organism=Homo sapiens, GI17505907, Length=397, Percent_Identity=31.9899244332494, Blast_Score=151, Evalue=1e-36,
Organism=Homo sapiens, GI9966805, Length=322, Percent_Identity=33.5403726708075, Blast_Score=146, Evalue=3e-35,
Organism=Homo sapiens, GI9506931, Length=396, Percent_Identity=29.5454545454545, Blast_Score=142, Evalue=5e-34,
Organism=Homo sapiens, GI4826686, Length=336, Percent_Identity=31.547619047619, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI8922886, Length=356, Percent_Identity=31.1797752808989, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI6005743, Length=356, Percent_Identity=30.8988764044944, Blast_Score=136, Evalue=3e-32,
Organism=Homo sapiens, GI62241022, Length=333, Percent_Identity=31.8318318318318, Blast_Score=135, Evalue=8e-32,
Organism=Homo sapiens, GI164419732, Length=346, Percent_Identity=29.7687861271676, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI62241024, Length=317, Percent_Identity=31.5457413249211, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI154759257, Length=364, Percent_Identity=29.9450549450549, Blast_Score=129, Evalue=5e-30,
Organism=Homo sapiens, GI256773275, Length=409, Percent_Identity=28.6063569682152, Blast_Score=125, Evalue=8e-29,
Organism=Homo sapiens, GI20336298, Length=196, Percent_Identity=40.3061224489796, Blast_Score=117, Evalue=2e-26,
Organism=Escherichia coli, GI1787016, Length=377, Percent_Identity=44.2970822281167, Blast_Score=281, Evalue=8e-77,
Organism=Escherichia coli, GI87082221, Length=358, Percent_Identity=39.1061452513966, Blast_Score=240, Evalue=1e-64,
Organism=Escherichia coli, GI1787605, Length=328, Percent_Identity=41.7682926829268, Blast_Score=231, Evalue=7e-62,
Organism=Escherichia coli, GI1790214, Length=409, Percent_Identity=34.4743276283619, Blast_Score=213, Evalue=1e-56,
Organism=Escherichia coli, GI1788930, Length=314, Percent_Identity=37.8980891719745, Blast_Score=198, Evalue=6e-52,
Organism=Caenorhabditis elegans, GI17555296, Length=413, Percent_Identity=32.4455205811138, Blast_Score=224, Evalue=6e-59,
Organism=Caenorhabditis elegans, GI115533224, Length=363, Percent_Identity=37.1900826446281, Blast_Score=214, Evalue=7e-56,
Organism=Caenorhabditis elegans, GI17510307, Length=363, Percent_Identity=36.6391184573003, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17510309, Length=363, Percent_Identity=36.6391184573003, Blast_Score=209, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI71995514, Length=363, Percent_Identity=36.6391184573003, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI71995724, Length=335, Percent_Identity=33.4328358208955, Blast_Score=207, Evalue=7e-54,
Organism=Caenorhabditis elegans, GI17507121, Length=335, Percent_Identity=33.134328358209, Blast_Score=207, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI86570094, Length=329, Percent_Identity=35.5623100303951, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17552642, Length=328, Percent_Identity=37.5, Blast_Score=203, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI32565321, Length=356, Percent_Identity=34.2696629213483, Blast_Score=203, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI71987143, Length=366, Percent_Identity=32.2404371584699, Blast_Score=201, Evalue=5e-52,
Organism=Caenorhabditis elegans, GI17510559, Length=385, Percent_Identity=34.2857142857143, Blast_Score=201, Evalue=6e-52,
Organism=Caenorhabditis elegans, GI17507945, Length=358, Percent_Identity=34.6368715083799, Blast_Score=201, Evalue=7e-52,
Organism=Caenorhabditis elegans, GI71995718, Length=364, Percent_Identity=36.5384615384615, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI17552114, Length=332, Percent_Identity=33.1325301204819, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI115532548, Length=379, Percent_Identity=32.4538258575198, Blast_Score=196, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI115532546, Length=379, Percent_Identity=32.4538258575198, Blast_Score=195, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI71999646, Length=345, Percent_Identity=34.2028985507246, Blast_Score=194, Evalue=8e-50,
Organism=Caenorhabditis elegans, GI71999644, Length=345, Percent_Identity=34.2028985507246, Blast_Score=193, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI193208216, Length=355, Percent_Identity=35.4929577464789, Blast_Score=184, Evalue=7e-47,
Organism=Caenorhabditis elegans, GI17537549, Length=377, Percent_Identity=34.2175066312997, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17509811, Length=352, Percent_Identity=33.8068181818182, Blast_Score=180, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17507881, Length=352, Percent_Identity=34.6590909090909, Blast_Score=179, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI17507877, Length=368, Percent_Identity=34.2391304347826, Blast_Score=177, Evalue=7e-45,
Organism=Caenorhabditis elegans, GI17505370, Length=333, Percent_Identity=34.2342342342342, Blast_Score=175, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI17507879, Length=368, Percent_Identity=33.4239130434783, Blast_Score=171, Evalue=7e-43,
Organism=Caenorhabditis elegans, GI71982858, Length=339, Percent_Identity=29.2035398230088, Blast_Score=169, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17556951, Length=366, Percent_Identity=29.5081967213115, Blast_Score=163, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17507641, Length=371, Percent_Identity=30.4582210242588, Blast_Score=157, Evalue=8e-39,
Organism=Caenorhabditis elegans, GI32564046, Length=371, Percent_Identity=30.4582210242588, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI193206561, Length=321, Percent_Identity=30.5295950155763, Blast_Score=154, Evalue=8e-38,
Organism=Caenorhabditis elegans, GI17508543, Length=409, Percent_Identity=29.3398533007335, Blast_Score=152, Evalue=3e-37,
Organism=Caenorhabditis elegans, GI17553716, Length=331, Percent_Identity=28.7009063444109, Blast_Score=142, Evalue=5e-34,
Organism=Caenorhabditis elegans, GI71990816, Length=350, Percent_Identity=29.1428571428571, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI71997889, Length=354, Percent_Identity=27.9661016949153, Blast_Score=124, Evalue=6e-29,
Organism=Caenorhabditis elegans, GI25148291, Length=334, Percent_Identity=26.9461077844311, Blast_Score=122, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI17536099, Length=387, Percent_Identity=28.1653746770026, Blast_Score=117, Evalue=8e-27,
Organism=Caenorhabditis elegans, GI17536101, Length=387, Percent_Identity=28.1653746770026, Blast_Score=117, Evalue=9e-27,
Organism=Caenorhabditis elegans, GI17536103, Length=387, Percent_Identity=28.4237726098191, Blast_Score=115, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI25148203, Length=428, Percent_Identity=25, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI71982862, Length=208, Percent_Identity=29.8076923076923, Blast_Score=96, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI71987152, Length=95, Percent_Identity=41.0526315789474, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17565430, Length=393, Percent_Identity=23.9185750636132, Blast_Score=79, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6321360, Length=357, Percent_Identity=38.375350140056, Blast_Score=233, Evalue=4e-62,
Organism=Saccharomyces cerevisiae, GI6321856, Length=371, Percent_Identity=36.3881401617251, Blast_Score=233, Evalue=4e-62,
Organism=Saccharomyces cerevisiae, GI6325138, Length=355, Percent_Identity=38.8732394366197, Blast_Score=230, Evalue=4e-61,
Organism=Saccharomyces cerevisiae, GI6324778, Length=415, Percent_Identity=35.1807228915663, Blast_Score=223, Evalue=4e-59,
Organism=Saccharomyces cerevisiae, GI6324217, Length=328, Percent_Identity=36.5853658536585, Blast_Score=212, Evalue=1e-55,
Organism=Saccharomyces cerevisiae, GI6320041, Length=347, Percent_Identity=33.7175792507205, Blast_Score=203, Evalue=5e-53,
Organism=Saccharomyces cerevisiae, GI6319714, Length=381, Percent_Identity=33.0708661417323, Blast_Score=202, Evalue=1e-52,
Organism=Saccharomyces cerevisiae, GI6323021, Length=358, Percent_Identity=33.5195530726257, Blast_Score=200, Evalue=3e-52,
Organism=Saccharomyces cerevisiae, GI6320224, Length=342, Percent_Identity=31.8713450292398, Blast_Score=197, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6323947, Length=351, Percent_Identity=34.4729344729345, Blast_Score=187, Evalue=4e-48,
Organism=Saccharomyces cerevisiae, GI6320119, Length=355, Percent_Identity=33.2394366197183, Blast_Score=183, Evalue=5e-47,
Organism=Saccharomyces cerevisiae, GI6322427, Length=376, Percent_Identity=32.1808510638298, Blast_Score=177, Evalue=2e-45,
Organism=Saccharomyces cerevisiae, GI6320449, Length=358, Percent_Identity=32.9608938547486, Blast_Score=177, Evalue=3e-45,
Organism=Saccharomyces cerevisiae, GI6321963, Length=376, Percent_Identity=34.0425531914894, Blast_Score=177, Evalue=3e-45,
Organism=Saccharomyces cerevisiae, GI6324620, Length=371, Percent_Identity=34.2318059299191, Blast_Score=174, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6321111, Length=374, Percent_Identity=29.4117647058824, Blast_Score=172, Evalue=9e-44,
Organism=Saccharomyces cerevisiae, GI6322912, Length=350, Percent_Identity=30.8571428571429, Blast_Score=160, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6322323, Length=350, Percent_Identity=30.8571428571429, Blast_Score=160, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6319618, Length=408, Percent_Identity=30.1470588235294, Blast_Score=160, Evalue=4e-40,
Organism=Saccharomyces cerevisiae, GI6320400, Length=368, Percent_Identity=31.25, Blast_Score=154, Evalue=3e-38,
Organism=Saccharomyces cerevisiae, GI6321267, Length=321, Percent_Identity=32.0872274143302, Blast_Score=145, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6322876, Length=431, Percent_Identity=30.1624129930394, Blast_Score=140, Evalue=3e-34,
Organism=Saccharomyces cerevisiae, GI6320173, Length=239, Percent_Identity=36.4016736401674, Blast_Score=133, Evalue=4e-32,
Organism=Saccharomyces cerevisiae, GI6324366, Length=353, Percent_Identity=29.1784702549575, Blast_Score=123, Evalue=4e-29,
Organism=Saccharomyces cerevisiae, GI6323306, Length=291, Percent_Identity=31.9587628865979, Blast_Score=116, Evalue=5e-27,
Organism=Saccharomyces cerevisiae, GI6321374, Length=380, Percent_Identity=23.6842105263158, Blast_Score=91, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24584399, Length=349, Percent_Identity=37.8223495702006, Blast_Score=227, Evalue=1e-59,
Organism=Drosophila melanogaster, GI17985987, Length=368, Percent_Identity=36.9565217391304, Blast_Score=226, Evalue=2e-59,
Organism=Drosophila melanogaster, GI24662330, Length=336, Percent_Identity=38.0952380952381, Blast_Score=224, Evalue=7e-59,
Organism=Drosophila melanogaster, GI28574962, Length=336, Percent_Identity=37.797619047619, Blast_Score=221, Evalue=6e-58,
Organism=Drosophila melanogaster, GI24585582, Length=346, Percent_Identity=36.1271676300578, Blast_Score=218, Evalue=7e-57,
Organism=Drosophila melanogaster, GI24642151, Length=328, Percent_Identity=35.6707317073171, Blast_Score=217, Evalue=1e-56,
Organism=Drosophila melanogaster, GI24584994, Length=358, Percent_Identity=36.0335195530726, Blast_Score=214, Evalue=6e-56,
Organism=Drosophila melanogaster, GI18857967, Length=368, Percent_Identity=33.695652173913, Blast_Score=204, Evalue=7e-53,
Organism=Drosophila melanogaster, GI24645031, Length=321, Percent_Identity=32.398753894081, Blast_Score=199, Evalue=3e-51,
Organism=Drosophila melanogaster, GI24644479, Length=347, Percent_Identity=33.7175792507205, Blast_Score=199, Evalue=4e-51,
Organism=Drosophila melanogaster, GI24644483, Length=347, Percent_Identity=33.7175792507205, Blast_Score=198, Evalue=5e-51,
Organism=Drosophila melanogaster, GI281361218, Length=347, Percent_Identity=33.7175792507205, Blast_Score=198, Evalue=5e-51,
Organism=Drosophila melanogaster, GI24644481, Length=347, Percent_Identity=33.7175792507205, Blast_Score=198, Evalue=5e-51,
Organism=Drosophila melanogaster, GI24644487, Length=347, Percent_Identity=33.7175792507205, Blast_Score=198, Evalue=5e-51,
Organism=Drosophila melanogaster, GI45551833, Length=347, Percent_Identity=33.7175792507205, Blast_Score=198, Evalue=5e-51,
Organism=Drosophila melanogaster, GI24644485, Length=347, Percent_Identity=33.7175792507205, Blast_Score=198, Evalue=5e-51,
Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=33.7078651685393, Blast_Score=198, Evalue=5e-51,
Organism=Drosophila melanogaster, GI21356161, Length=338, Percent_Identity=35.7988165680473, Blast_Score=197, Evalue=8e-51,
Organism=Drosophila melanogaster, GI21355075, Length=336, Percent_Identity=33.3333333333333, Blast_Score=191, Evalue=7e-49,
Organism=Drosophila melanogaster, GI28575014, Length=352, Percent_Identity=33.8068181818182, Blast_Score=185, Evalue=6e-47,
Organism=Drosophila melanogaster, GI24583281, Length=340, Percent_Identity=33.5294117647059, Blast_Score=184, Evalue=1e-46,
Organism=Drosophila melanogaster, GI17136814, Length=350, Percent_Identity=32.5714285714286, Blast_Score=184, Evalue=1e-46,
Organism=Drosophila melanogaster, GI24583279, Length=340, Percent_Identity=33.5294117647059, Blast_Score=183, Evalue=2e-46,
Organism=Drosophila melanogaster, GI24666101, Length=352, Percent_Identity=35.5113636363636, Blast_Score=178, Evalue=5e-45,
Organism=Drosophila melanogaster, GI24582080, Length=367, Percent_Identity=31.6076294277929, Blast_Score=175, Evalue=5e-44,
Organism=Drosophila melanogaster, GI24582078, Length=367, Percent_Identity=31.6076294277929, Blast_Score=175, Evalue=5e-44,
Organism=Drosophila melanogaster, GI17136248, Length=367, Percent_Identity=31.6076294277929, Blast_Score=175, Evalue=5e-44,
Organism=Drosophila melanogaster, GI24582075, Length=367, Percent_Identity=31.6076294277929, Blast_Score=175, Evalue=5e-44,
Organism=Drosophila melanogaster, GI281365720, Length=290, Percent_Identity=36.551724137931, Blast_Score=175, Evalue=5e-44,
Organism=Drosophila melanogaster, GI17647335, Length=354, Percent_Identity=29.6610169491525, Blast_Score=164, Evalue=9e-41,
Organism=Drosophila melanogaster, GI28571808, Length=332, Percent_Identity=32.2289156626506, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI28571809, Length=332, Percent_Identity=32.2289156626506, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI24581954, Length=326, Percent_Identity=29.1411042944785, Blast_Score=160, Evalue=1e-39,
Organism=Drosophila melanogaster, GI24581952, Length=326, Percent_Identity=29.1411042944785, Blast_Score=160, Evalue=1e-39,
Organism=Drosophila melanogaster, GI24581956, Length=326, Percent_Identity=29.1411042944785, Blast_Score=160, Evalue=1e-39,
Organism=Drosophila melanogaster, GI21355559, Length=384, Percent_Identity=33.0729166666667, Blast_Score=158, Evalue=8e-39,
Organism=Drosophila melanogaster, GI24642822, Length=352, Percent_Identity=31.8181818181818, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI20130173, Length=416, Percent_Identity=28.8461538461538, Blast_Score=145, Evalue=6e-35,
Organism=Drosophila melanogaster, GI24643725, Length=360, Percent_Identity=29.7222222222222, Blast_Score=139, Evalue=3e-33,
Organism=Drosophila melanogaster, GI24668515, Length=325, Percent_Identity=29.5384615384615, Blast_Score=135, Evalue=3e-32,
Organism=Drosophila melanogaster, GI17136666, Length=396, Percent_Identity=29.040404040404, Blast_Score=134, Evalue=1e-31,
Organism=Drosophila melanogaster, GI19920478, Length=335, Percent_Identity=28.6567164179104, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI18859659, Length=194, Percent_Identity=38.659793814433, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI28571338, Length=194, Percent_Identity=38.659793814433, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24640164, Length=346, Percent_Identity=23.6994219653179, Blast_Score=86, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 45189; Mature: 45189

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFTDLKLSATIVDHLPANLTAATEIQGLAIPEVLAGRDLLALAQTGSGKTYAFGLPLLQ
CCCCCEEEEEHHHHHCCCCCEEHHHCCCCCCHHHHCCCCEEEEEECCCCCEEEECHHHHH
TIINDAVESREVKALVLVPTRELALQVAEALKLVSASTEITVLCGGVDKAEQLKELEQGP
HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCC
QLIVATPGRLLDLLRQQQLSLKSVKQLVLDEADRLMEMGFWPDIERILEFVPAKRQTLLF
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEE
SATLAPELNDKALKLLHNPKKIAAQAVNSVVADINESLYIVNKGDKARALIALIKQHKWS
EEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCE
QVLVFINGRDDADKLAKRLVKADINAMALHGDKEHQQRQQTLEAFKACELQVLVTTDLLS
EEEEEEECCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCEEEEEEHHHHH
RGIHIDALPVVINIDLPSSAPVYVHRIGRTARAGDNGIAISLVCHGEADNLKAIQLLTGR
CCCEEEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCC
ELELEALGGFEVTDQPSSGERKRAPRDKKANRRSQNKRSAKDFAAKRTKFPAK
CEEEEECCCEEECCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNFTDLKLSATIVDHLPANLTAATEIQGLAIPEVLAGRDLLALAQTGSGKTYAFGLPLLQ
CCCCCEEEEEHHHHHCCCCCEEHHHCCCCCCHHHHCCCCEEEEEECCCCCEEEECHHHHH
TIINDAVESREVKALVLVPTRELALQVAEALKLVSASTEITVLCGGVDKAEQLKELEQGP
HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCC
QLIVATPGRLLDLLRQQQLSLKSVKQLVLDEADRLMEMGFWPDIERILEFVPAKRQTLLF
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEE
SATLAPELNDKALKLLHNPKKIAAQAVNSVVADINESLYIVNKGDKARALIALIKQHKWS
EEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCE
QVLVFINGRDDADKLAKRLVKADINAMALHGDKEHQQRQQTLEAFKACELQVLVTTDLLS
EEEEEEECCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCEEEEEEHHHHH
RGIHIDALPVVINIDLPSSAPVYVHRIGRTARAGDNGIAISLVCHGEADNLKAIQLLTGR
CCCEEEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCC
ELELEALGGFEVTDQPSSGERKRAPRDKKANRRSQNKRSAKDFAAKRTKFPAK
CEEEEECCCEEECCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]