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The map label for this gene is yiaT [H]

Identifier: 167622873

GI number: 167622873

Start: 1151999

End: 1152874

Strand: Reverse

Name: yiaT [H]

Synonym: Shal_0933

Alternate gene names: 167622873

Gene position: 1152874-1151999 (Counterclockwise)

Preceding gene: 167622875

Following gene: 167622872

Centisome position: 22.06

GC content: 44.52

Gene sequence:

>876_bases
ATGCCATACTTATTAGCACTTCTGCTTACAGTCAGCTTATATTCGGGTGCCGCTTTCGCTGCCCCCCCAACAGCTTGTGA
TAACAATACAGACTGTATTGAAGTCGGTCGTTGGGATCTTGGCCTTGCCCTTGGCTATGGCAATAAGTCAAACCCGTTAA
AAGGTTACAAAGATATCCCCCTGTATATCGTGCCAACCATAGCTTACTATGGCGACAGCTGGTTCTTCGATAATGGTAAT
ATCGGTTACACCTTGGCCGAAGGGGAAAACTACACAGTCAACCTAATCACTACCTTTAGCAGTGACAGTGCCTTCTTCTA
TCGTTGGGATCCGTCGAATATCTTCCTATTCAGTGGTAGCAGCAATCAGCGTGCTGTTTCACCTGCGATCTCGACCTTTA
GTGACAGAGCGACTCCAGAACCCGTTATCGGCGAACTGGAAAATCGAAACTTTACATATCTTGGCGGAGCCGAGGCTTTT
ATTTACACCCGATTTGGTATAGTGCATGCCAGCGTCGCTCATGATATTTTAGACGTTCATGGTGGCCTTGAGTCTAAATT
GAAATGGTTCTACAACATTCCTTTAGACAGATGGAATTTTGAATTTGCTGCCGTATTAGACTGGAAGAGTGAAGAGGTCG
TCGATTACTACTACGGTGTAAGGCCGAGTGAGAGCCTCTACTGGAATCAAAAATATCAAGCGGAGTCTGCATTGAATAAG
AGCATAGAGTTTACGGGTCAGTATTTACTCACTGAAAACTGGAATTTACTCTTAGTTGCTCGTTACACTGACATCGCCGA
CGAAATTGTCGACAGTCCTCTTGTTGATAAAGATTACACTACGACCTATTTTGTAGGCGCAGCGTATAGGTTTTAA

Upstream 100 bases:

>100_bases
CAGTTTGCAACAAGTATCTTATCCTCCATGCCGCACCTCGGAATAAATGATACCCTATAGCTTCATTTGTTAATTTTGTA
ATCAAGAGTCAATGTTTTAG

Downstream 100 bases:

>100_bases
TTCGAGTGTTTTCAAAATTCAAACTAATATTGTCCTGTTTGCTTTTGGGCTCGCTCATGAGCGCAACAGCTGCGGCAATT
GATAGCACTGAAGAACCGGC

Product: MltA-interacting MipA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MPYLLALLLTVSLYSGAAFAAPPTACDNNTDCIEVGRWDLGLALGYGNKSNPLKGYKDIPLYIVPTIAYYGDSWFFDNGN
IGYTLAEGENYTVNLITTFSSDSAFFYRWDPSNIFLFSGSSNQRAVSPAISTFSDRATPEPVIGELENRNFTYLGGAEAF
IYTRFGIVHASVAHDILDVHGGLESKLKWFYNIPLDRWNFEFAAVLDWKSEEVVDYYYGVRPSESLYWNQKYQAESALNK
SIEFTGQYLLTENWNLLLVARYTDIADEIVDSPLVDKDYTTTYFVGAAYRF

Sequences:

>Translated_291_residues
MPYLLALLLTVSLYSGAAFAAPPTACDNNTDCIEVGRWDLGLALGYGNKSNPLKGYKDIPLYIVPTIAYYGDSWFFDNGN
IGYTLAEGENYTVNLITTFSSDSAFFYRWDPSNIFLFSGSSNQRAVSPAISTFSDRATPEPVIGELENRNFTYLGGAEAF
IYTRFGIVHASVAHDILDVHGGLESKLKWFYNIPLDRWNFEFAAVLDWKSEEVVDYYYGVRPSESLYWNQKYQAESALNK
SIEFTGQYLLTENWNLLLVARYTDIADEIVDSPLVDKDYTTTYFVGAAYRF
>Mature_290_residues
PYLLALLLTVSLYSGAAFAAPPTACDNNTDCIEVGRWDLGLALGYGNKSNPLKGYKDIPLYIVPTIAYYGDSWFFDNGNI
GYTLAEGENYTVNLITTFSSDSAFFYRWDPSNIFLFSGSSNQRAVSPAISTFSDRATPEPVIGELENRNFTYLGGAEAFI
YTRFGIVHASVAHDILDVHGGLESKLKWFYNIPLDRWNFEFAAVLDWKSEEVVDYYYGVRPSESLYWNQKYQAESALNKS
IEFTGQYLLTENWNLLLVARYTDIADEIVDSPLVDKDYTTTYFVGAAYRF

Specific function: Unknown

COG id: COG3713

COG function: function code M; Outer membrane protein V

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mipA/ompV family [H]

Homologues:

Organism=Escherichia coli, GI1790010, Length=254, Percent_Identity=25.1968503937008, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1788082, Length=289, Percent_Identity=26.9896193771626, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010583 [H]

Pfam domain/function: PF06629 MipA [H]

EC number: NA

Molecular weight: Translated: 32887; Mature: 32756

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYLLALLLTVSLYSGAAFAAPPTACDNNTDCIEVGRWDLGLALGYGNKSNPLKGYKDIP
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEEEEEEEECCCCCCCCCCCCCCC
LYIVPTIAYYGDSWFFDNGNIGYTLAEGENYTVNLITTFSSDSAFFYRWDPSNIFLFSGS
EEEEEEEEECCCEEEEECCCEEEEEECCCCEEEEEEEEECCCCEEEEEECCCEEEEEECC
SNQRAVSPAISTFSDRATPEPVIGELENRNFTYLGGAEAFIYTRFGIVHASVAHDILDVH
CCCEEECHHHHHHCCCCCCCCHHHHCCCCCEEEECCCCEEEEEEEHHHHHHHHHHHHHHC
GGLESKLKWFYNIPLDRWNFEFAAVLDWKSEEVVDYYYGVRPSESLYWNQKYQAESALNK
CCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEHHHCCCCCCCCEEECCCHHHHHHHCC
SIEFTGQYLLTENWNLLLVARYTDIADEIVDSPLVDKDYTTTYFVGAAYRF
CEEECEEEEEECCCCEEEEEECHHHHHHHHCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure 
PYLLALLLTVSLYSGAAFAAPPTACDNNTDCIEVGRWDLGLALGYGNKSNPLKGYKDIP
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEEEEEEEECCCCCCCCCCCCCCC
LYIVPTIAYYGDSWFFDNGNIGYTLAEGENYTVNLITTFSSDSAFFYRWDPSNIFLFSGS
EEEEEEEEECCCEEEEECCCEEEEEECCCCEEEEEEEEECCCCEEEEEECCCEEEEEECC
SNQRAVSPAISTFSDRATPEPVIGELENRNFTYLGGAEAFIYTRFGIVHASVAHDILDVH
CCCEEECHHHHHHCCCCCCCCHHHHCCCCCEEEECCCCEEEEEEEHHHHHHHHHHHHHHC
GGLESKLKWFYNIPLDRWNFEFAAVLDWKSEEVVDYYYGVRPSESLYWNQKYQAESALNK
CCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEHHHCCCCCCCCEEECCCHHHHHHHCC
SIEFTGQYLLTENWNLLLVARYTDIADEIVDSPLVDKDYTTTYFVGAAYRF
CEEECEEEEEECCCCEEEEEECHHHHHHHHCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]