Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622862

Identifier: 167622862

GI number: 167622862

Start: 1142149

End: 1142760

Strand: Direct

Name: 167622862

Synonym: Shal_0922

Alternate gene names: NA

Gene position: 1142149-1142760 (Clockwise)

Preceding gene: 167622861

Following gene: 167622863

Centisome position: 21.85

GC content: 45.75

Gene sequence:

>612_bases
ATGAAAAGAAGTTTAGCTATATTACTGGGTTCGTTTTGTGCATTACCTGCTACGGCTGAAGTTTATGTCGCACCTTTCGG
GGGCTACAGTTTCGGTGCTAGCGAGTTTGATATTGCCAGCACCGAATCGGACGAAGCGGGGAAGGTCAAAATAGCCGAGT
CGCAAAACTATGGTGTCATGCTGGGCTTTACCACGAAAGATCCCGGTAATGTCTACCTGCTTTATAGCCACCAATCGACA
GATTTAAAAACCGGCGATAACTTCAGTCCTAATGTGATTACCTCTATGGATGTGGATTATTTCCATGTGGGTGGCAGTCT
TTATTTCCCTATGCAAAGTGTTAAGCCCTATGTCACTACCAGTCTAGGCTTAACTAATATGCGACCTGGCGGTTCTTATT
CAAATGAAACCCGTTTTTCTGTGGCGCTGGGTGGCGGTGTTGAATACCAAGCGACTGAGGCATTTTCACTGTTTGCTGAA
GTCAAAGGTTATGCGACCTTTATCAATGCTGATAACGCCTTGTTTTGTGGTAATGACGGCTGTCTGTGGAATATCCAGTC
GGACATCATGTGGCAGGGGCAAGCCAATATTGGCGCCAGCTTTAAGTTCTAA

Upstream 100 bases:

>100_bases
CCAAAACAAAAGCACAAGATATTCAAGCGGCTTATGATAGAGTTAAAGGTGATCGAGGCATGCGTTAGTTATATAAATAA
CAAAAGTATAGGGACATATA

Downstream 100 bases:

>100_bases
TTTGTCGTTTATAGAAGGACTTTTATAAAAGCCATTTAGTGTCGTTAATTTATAACAAGGGCTGTTTTAGATGAAAGTAG
TGGTACTGGATGGATATACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MKRSLAILLGSFCALPATAEVYVAPFGGYSFGASEFDIASTESDEAGKVKIAESQNYGVMLGFTTKDPGNVYLLYSHQST
DLKTGDNFSPNVITSMDVDYFHVGGSLYFPMQSVKPYVTTSLGLTNMRPGGSYSNETRFSVALGGGVEYQATEAFSLFAE
VKGYATFINADNALFCGNDGCLWNIQSDIMWQGQANIGASFKF

Sequences:

>Translated_203_residues
MKRSLAILLGSFCALPATAEVYVAPFGGYSFGASEFDIASTESDEAGKVKIAESQNYGVMLGFTTKDPGNVYLLYSHQST
DLKTGDNFSPNVITSMDVDYFHVGGSLYFPMQSVKPYVTTSLGLTNMRPGGSYSNETRFSVALGGGVEYQATEAFSLFAE
VKGYATFINADNALFCGNDGCLWNIQSDIMWQGQANIGASFKF
>Mature_203_residues
MKRSLAILLGSFCALPATAEVYVAPFGGYSFGASEFDIASTESDEAGKVKIAESQNYGVMLGFTTKDPGNVYLLYSHQST
DLKTGDNFSPNVITSMDVDYFHVGGSLYFPMQSVKPYVTTSLGLTNMRPGGSYSNETRFSVALGGGVEYQATEAFSLFAE
VKGYATFINADNALFCGNDGCLWNIQSDIMWQGQANIGASFKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21885; Mature: 21885

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSLAILLGSFCALPATAEVYVAPFGGYSFGASEFDIASTESDEAGKVKIAESQNYGVM
CCCCCEEEEHHHHCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCEEEEEECCCCEEE
LGFTTKDPGNVYLLYSHQSTDLKTGDNFSPNVITSMDVDYFHVGGSLYFPMQSVKPYVTT
EEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCEEEEECCEEEECHHHCCCEEEE
SLGLTNMRPGGSYSNETRFSVALGGGVEYQATEAFSLFAEVKGYATFINADNALFCGNDG
ECCCCCCCCCCCCCCCEEEEEEECCCEEEEHHHHHHHHHHHCCEEEEEECCCEEEECCCC
CLWNIQSDIMWQGQANIGASFKF
EEEEECCCEEEECCCCCCEEECC
>Mature Secondary Structure
MKRSLAILLGSFCALPATAEVYVAPFGGYSFGASEFDIASTESDEAGKVKIAESQNYGVM
CCCCCEEEEHHHHCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCEEEEEECCCCEEE
LGFTTKDPGNVYLLYSHQSTDLKTGDNFSPNVITSMDVDYFHVGGSLYFPMQSVKPYVTT
EEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCEEEEECCEEEECHHHCCCEEEE
SLGLTNMRPGGSYSNETRFSVALGGGVEYQATEAFSLFAEVKGYATFINADNALFCGNDG
ECCCCCCCCCCCCCCCEEEEEEECCCEEEEHHHHHHHHHHHCCEEEEEECCCEEEECCCC
CLWNIQSDIMWQGQANIGASFKF
EEEEECCCEEEECCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA