| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is fbp
Identifier: 167622724
GI number: 167622724
Start: 978116
End: 979105
Strand: Reverse
Name: fbp
Synonym: Shal_0784
Alternate gene names: 167622724
Gene position: 979105-978116 (Counterclockwise)
Preceding gene: 167622726
Following gene: 167622715
Centisome position: 18.73
GC content: 46.97
Gene sequence:
>990_bases ATGCAAACTCTGGCTGAAAACCTGACATCACAAGCAATTTCTCCTACTCTTGAAAAGCTGATCCTGACCCTAGCTAACAC CTCAAAAGAGATTAGCCATGCAGTACGCCACGGCGCACTCGCAGGCGTGCTAGGTGCAACAGAGCAGGAAAATGTTCAAG GCGAAACACAGAAGAAACTCGATATCATCACCAATGATATGCTCAAAGATGCCCTAAAGGCCGACGGTACAGTGCGTGGT ATCGCCTCTGAAGAGGAAGACTATGTGGTTGAAGCCGATGCCAACGGTGAGTTCCTAGTCTGTTTTGATCCGCTAGATGG TTCTTCAAACATCGACATTAACTCACTTGTCGGCACCATCTTCTCGGTATTACCAGCGCCAGCAGGCGAGCTAACAGAAA AGAGTTTCCTACAAGCAGGTCACAACCAAGTTGCCGCAGGTTATGTACTATATGGCCCATCAACCATGCTTGCGCTAACT ACAGGTCAAGGCGTACAGCTATTCACCCTAAACCCAGAGACTAACCAGTTCTTGCTAACCAATGCTGCTATGGCTGTCAG CAAAGACACCGGCGAATTTGCCATTAACATGTCAAACCAACGCTTCTGGGAAGCGCCAATGCAGACTTACATTAGCGATT TGCTACTAGGTAAAATTGGCCCACGTGAAAAGTCATTCAACATGCGCTGGATTGCAGCCATGGTTGGTGACGTGCACCGC GTACTTTGTCGCGGCGGTATCTTCACTTATCCGACAGATAACAAAAATCCAGAGAAGCCATACAAGCTACGTTTAATGTA CGAAGCTAACCCAATGGCATTCTTAGTTGAGCAAGCAGGTGGTAAAGCGTCAACGGGTTATGAAACCATTATGGATATTG AGCCAACTGCAATTCACCAACGTGTTGCGGTGATCTTAGGCTCAGCCAATGAAGTTGATGCTTGTCTTGAATATCACGGT ATTGATTACAGCGAAGAACCAGCTTTATAG
Upstream 100 bases:
>100_bases AAACTGCCATACTCAGGTATCATCGCGTCAATAATAAAGAATACACTTTTGTCCTGACCTCAAACTCAATTTACTCACGT AAAATTGTATAGGAAACAAG
Downstream 100 bases:
>100_bases GTTCTAGGAAAGGCTGAGACGGTAAGAGCCGAGAAAGCTAAGACGGTGTAGGCTAAGACGGTAAAAGCCGGAAAAGAAAA AATCTAAAAGAAAAGCACAA
Product: fructose-1,6-bisphosphatase
Products: NA
Alternate protein names: FBPase class 1; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MQTLAENLTSQAISPTLEKLILTLANTSKEISHAVRHGALAGVLGATEQENVQGETQKKLDIITNDMLKDALKADGTVRG IASEEEDYVVEADANGEFLVCFDPLDGSSNIDINSLVGTIFSVLPAPAGELTEKSFLQAGHNQVAAGYVLYGPSTMLALT TGQGVQLFTLNPETNQFLLTNAAMAVSKDTGEFAINMSNQRFWEAPMQTYISDLLLGKIGPREKSFNMRWIAAMVGDVHR VLCRGGIFTYPTDNKNPEKPYKLRLMYEANPMAFLVEQAGGKASTGYETIMDIEPTAIHQRVAVILGSANEVDACLEYHG IDYSEEPAL
Sequences:
>Translated_329_residues MQTLAENLTSQAISPTLEKLILTLANTSKEISHAVRHGALAGVLGATEQENVQGETQKKLDIITNDMLKDALKADGTVRG IASEEEDYVVEADANGEFLVCFDPLDGSSNIDINSLVGTIFSVLPAPAGELTEKSFLQAGHNQVAAGYVLYGPSTMLALT TGQGVQLFTLNPETNQFLLTNAAMAVSKDTGEFAINMSNQRFWEAPMQTYISDLLLGKIGPREKSFNMRWIAAMVGDVHR VLCRGGIFTYPTDNKNPEKPYKLRLMYEANPMAFLVEQAGGKASTGYETIMDIEPTAIHQRVAVILGSANEVDACLEYHG IDYSEEPAL >Mature_329_residues MQTLAENLTSQAISPTLEKLILTLANTSKEISHAVRHGALAGVLGATEQENVQGETQKKLDIITNDMLKDALKADGTVRG IASEEEDYVVEADANGEFLVCFDPLDGSSNIDINSLVGTIFSVLPAPAGELTEKSFLQAGHNQVAAGYVLYGPSTMLALT TGQGVQLFTLNPETNQFLLTNAAMAVSKDTGEFAINMSNQRFWEAPMQTYISDLLLGKIGPREKSFNMRWIAAMVGDVHR VLCRGGIFTYPTDNKNPEKPYKLRLMYEANPMAFLVEQAGGKASTGYETIMDIEPTAIHQRVAVILGSANEVDACLEYHG IDYSEEPAL
Specific function: INVOLVED IN SEVERAL METABOLIC PATHWAYS. IN E.COLI AND YEAST IT IS NECESSARY FOR GROWTH ON SUBSTANCES SUCH AS GLYCEROL, SUCCINATE AND ACETATE. [C]
COG id: COG0158
COG function: function code G; Fructose-1,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FBPase class 1 family
Homologues:
Organism=Homo sapiens, GI22907028, Length=301, Percent_Identity=41.1960132890365, Blast_Score=232, Evalue=4e-61, Organism=Homo sapiens, GI189083692, Length=301, Percent_Identity=42.1926910299003, Blast_Score=229, Evalue=2e-60, Organism=Homo sapiens, GI16579888, Length=301, Percent_Identity=42.1926910299003, Blast_Score=229, Evalue=2e-60, Organism=Escherichia coli, GI1790679, Length=323, Percent_Identity=43.0340557275542, Blast_Score=238, Evalue=4e-64, Organism=Caenorhabditis elegans, GI17508131, Length=308, Percent_Identity=41.2337662337662, Blast_Score=230, Evalue=7e-61, Organism=Saccharomyces cerevisiae, GI6323409, Length=297, Percent_Identity=39.7306397306397, Blast_Score=223, Evalue=3e-59, Organism=Drosophila melanogaster, GI45550998, Length=320, Percent_Identity=39.0625, Blast_Score=202, Evalue=3e-52, Organism=Drosophila melanogaster, GI19921562, Length=320, Percent_Identity=39.0625, Blast_Score=202, Evalue=3e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): F16PA_SHEHH (B0TTL6)
Other databases:
- EMBL: CP000931 - RefSeq: YP_001673018.1 - ProteinModelPortal: B0TTL6 - SMR: B0TTL6 - GeneID: 5902875 - GenomeReviews: CP000931_GR - KEGG: shl:Shal_0784 - HOGENOM: HBG731261 - OMA: HWEAPVQ - ProtClustDB: PRK09293 - BioCyc: SHAL458817:SHAL_0784-MONOMER - GO: GO:0005737 - HAMAP: MF_01855 - InterPro: IPR000146 - PANTHER: PTHR11556 - PRINTS: PR00115
Pfam domain/function: PF00316 FBPase
EC number: =3.1.3.11
Molecular weight: Translated: 35697; Mature: 35697
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: PS00124 FBPASE; PS00659 GLYCOSYL_HYDROL_F5
Important sites: BINDING 196-196 BINDING 262-262
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTLAENLTSQAISPTLEKLILTLANTSKEISHAVRHGALAGVLGATEQENVQGETQKKL CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH DIITNDMLKDALKADGTVRGIASEEEDYVVEADANGEFLVCFDPLDGSSNIDINSLVGTI HHHHHHHHHHHHHCCCCEEECCCCCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHH FSVLPAPAGELTEKSFLQAGHNQVAAGYVLYGPSTMLALTTGQGVQLFTLNPETNQFLLT HHHHCCCCCHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECCCCEEEEEECCCCCEEEEE NAAMAVSKDTGEFAINMSNQRFWEAPMQTYISDLLLGKIGPREKSFNMRWIAAMVGDVHR EEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH VLCRGGIFTYPTDNKNPEKPYKLRLMYEANPMAFLVEQAGGKASTGYETIMDIEPTAIHQ HHHCCCEEECCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCEEEECCHHHHHH RVAVILGSANEVDACLEYHGIDYSEEPAL HHHEEECCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MQTLAENLTSQAISPTLEKLILTLANTSKEISHAVRHGALAGVLGATEQENVQGETQKKL CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH DIITNDMLKDALKADGTVRGIASEEEDYVVEADANGEFLVCFDPLDGSSNIDINSLVGTI HHHHHHHHHHHHHCCCCEEECCCCCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHH FSVLPAPAGELTEKSFLQAGHNQVAAGYVLYGPSTMLALTTGQGVQLFTLNPETNQFLLT HHHHCCCCCHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECCCCEEEEEECCCCCEEEEE NAAMAVSKDTGEFAINMSNQRFWEAPMQTYISDLLLGKIGPREKSFNMRWIAAMVGDVHR EEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH VLCRGGIFTYPTDNKNPEKPYKLRLMYEANPMAFLVEQAGGKASTGYETIMDIEPTAIHQ HHHCCCEEECCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCEEEECCHHHHHH RVAVILGSANEVDACLEYHGIDYSEEPAL HHHEEECCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA