Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622650

Identifier: 167622650

GI number: 167622650

Start: 879354

End: 879683

Strand: Reverse

Name: 167622650

Synonym: Shal_0710

Alternate gene names: NA

Gene position: 879683-879354 (Counterclockwise)

Preceding gene: 167622652

Following gene: 167622649

Centisome position: 16.83

GC content: 40.61

Gene sequence:

>330_bases
ATGTCACTTGCTATAGTCCTATTTTCAGGTAACGTTATAACAACATCAATTGACATAAGAAGCGTTAATATGAAGTCAGG
TAAGCACGATGCACAGCTACTCAAACTTGCGTTAGAAATTGGTGTTGGCTACGCCAAGAAGAGAGGTTTTGCCGATTTTG
GTCAAGGGATCTCTCCAAAAGACAAAGTTGAATGTATTTATCGGTTACTGGTGCAAGATAACCTTATCCAAGCATTATCA
AAAGACAAAGAAGATGGCCCCAATATGAAACACAAACTGGTGTTATGGATCAGCCGCCAACTGCCACCAGAGCATGAACT
GCTTAACTGA

Upstream 100 bases:

>100_bases
CTTAGGTGGCCTAGCCTCAGTAGGACTCGTCACCACGGTGACCTAATCATCGACAACAAGCTTGGAGTTTTCAATAGATT
AAACTGCCGTTATCAACGCT

Downstream 100 bases:

>100_bases
TCATTACTTGTCACTATCAATCCACCTGCTACGCTCAGTGGCAGGTATTACTCATCGAGGTCTTCCCTCAAAAAAGCAGT
AGCTTAAACCTATTAGGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MSLAIVLFSGNVITTSIDIRSVNMKSGKHDAQLLKLALEIGVGYAKKRGFADFGQGISPKDKVECIYRLLVQDNLIQALS
KDKEDGPNMKHKLVLWISRQLPPEHELLN

Sequences:

>Translated_109_residues
MSLAIVLFSGNVITTSIDIRSVNMKSGKHDAQLLKLALEIGVGYAKKRGFADFGQGISPKDKVECIYRLLVQDNLIQALS
KDKEDGPNMKHKLVLWISRQLPPEHELLN
>Mature_108_residues
SLAIVLFSGNVITTSIDIRSVNMKSGKHDAQLLKLALEIGVGYAKKRGFADFGQGISPKDKVECIYRLLVQDNLIQALSK
DKEDGPNMKHKLVLWISRQLPPEHELLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12157; Mature: 12026

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLAIVLFSGNVITTSIDIRSVNMKSGKHDAQLLKLALEIGVGYAKKRGFADFGQGISPK
CCEEEEEEECCEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHCCCCHHHCCCCCCH
DKVECIYRLLVQDNLIQALSKDKEDGPNMKHKLVLWISRQLPPEHELLN
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
SLAIVLFSGNVITTSIDIRSVNMKSGKHDAQLLKLALEIGVGYAKKRGFADFGQGISPK
CEEEEEEECCEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHCCCCHHHCCCCCCH
DKVECIYRLLVQDNLIQALSKDKEDGPNMKHKLVLWISRQLPPEHELLN
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA