Click here to switch to the map view.

The map label for this gene is 167622601

Identifier: 167622601

GI number: 167622601

Start: 810060

End: 810812

Strand: Direct

Name: 167622601

Synonym: Shal_0661

Alternate gene names: NA

Gene position: 810060-810812 (Clockwise)

Preceding gene: 167622600

Following gene: 167622602

Centisome position: 15.5

GC content: 42.5

Gene sequence:

>753_bases
ATGAACAATAAATGGATCTTTGCAACTCTACTATTAACACCACAGGCTTTTGCTGGCGATATCATTCACTGGTGGGATGT
AAGTTTATCCGCGCTATATGGCGAAAATTATGATCTTGCTCCTTCAGAAAAGCAAACCACGCTTACCTTTGAAACCGCTG
GCGGTTGGAAATACGGTGATTGGTTTGCCTTCCAGGATTTCACCTACTTTAATGGTTCCAATGTGGGTAAGGAACAAACT
ACCTACGGTGAAATAACCACTCGCTTCAGTGCGGGGAAAATCTTCGATACTAAGGTGGGTTTTGGCCCAGTAACGGATCT
ATCCCTAGCCTTAAGTTTAGAAGAGGGTGAAGGACCGGTTAAGAGCTTTCTTTACGGTATCGGCTCAGATATTGATATCC
CGTATTTTAGTTTCTTTAGCCTAAATCTATACCGTCGTTCGGCTATCAGCGATGACAATATTAGTGATGGCTGGCAAGCA
TCTCCTTCATTTAAGATCGAGTTCCCTGTCGGTAATTCAAGCATCGTATTTGATGGCTATGTGGACTGGGTCTTTGCAGT
AGATGATGCGAATTACTCTACAGGTGTACACGTTAACCCGCAGCTTAAATATGACTTAGGTGCTGCCATTATGGGTGAGG
GCAATAAAGGCCACCTATATGTGGGTATCGAGTATGACTACTGGAAGAATAAATATGGTGTCGAAGGGATCGATCAAAAC
ACCTATTCATTCATTGTTAAATATCATCTATAG

Upstream 100 bases:

>100_bases
TAACTATTAGTGTCATTTTAATAATTTTTTATGCAGGTGGCTGGGCGATTTAATCTTGAATTAACCAATAACAATTAATC
AATTTTATAGGGTCAGAAAA

Downstream 100 bases:

>100_bases
AGCAGTCTAAGTTTTTTAGACTTAATAAAGTAAATGACCTCCGGCAAAGCCGGAGGCTCATTTGATGAGGCCCTCAAAGG
GCTAAAATAAGCACCAAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MNNKWIFATLLLTPQAFAGDIIHWWDVSLSALYGENYDLAPSEKQTTLTFETAGGWKYGDWFAFQDFTYFNGSNVGKEQT
TYGEITTRFSAGKIFDTKVGFGPVTDLSLALSLEEGEGPVKSFLYGIGSDIDIPYFSFFSLNLYRRSAISDDNISDGWQA
SPSFKIEFPVGNSSIVFDGYVDWVFAVDDANYSTGVHVNPQLKYDLGAAIMGEGNKGHLYVGIEYDYWKNKYGVEGIDQN
TYSFIVKYHL

Sequences:

>Translated_250_residues
MNNKWIFATLLLTPQAFAGDIIHWWDVSLSALYGENYDLAPSEKQTTLTFETAGGWKYGDWFAFQDFTYFNGSNVGKEQT
TYGEITTRFSAGKIFDTKVGFGPVTDLSLALSLEEGEGPVKSFLYGIGSDIDIPYFSFFSLNLYRRSAISDDNISDGWQA
SPSFKIEFPVGNSSIVFDGYVDWVFAVDDANYSTGVHVNPQLKYDLGAAIMGEGNKGHLYVGIEYDYWKNKYGVEGIDQN
TYSFIVKYHL
>Mature_250_residues
MNNKWIFATLLLTPQAFAGDIIHWWDVSLSALYGENYDLAPSEKQTTLTFETAGGWKYGDWFAFQDFTYFNGSNVGKEQT
TYGEITTRFSAGKIFDTKVGFGPVTDLSLALSLEEGEGPVKSFLYGIGSDIDIPYFSFFSLNLYRRSAISDDNISDGWQA
SPSFKIEFPVGNSSIVFDGYVDWVFAVDDANYSTGVHVNPQLKYDLGAAIMGEGNKGHLYVGIEYDYWKNKYGVEGIDQN
TYSFIVKYHL

Specific function: Unknown

COG id: COG3248

COG function: function code M; Nucleoside-binding outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28059; Mature: 28059

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKWIFATLLLTPQAFAGDIIHWWDVSLSALYGENYDLAPSEKQTTLTFETAGGWKYGD
CCCCEEEEEEEECCCHHHCCEEEEEECEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCC
WFAFQDFTYFNGSNVGKEQTTYGEITTRFSAGKIFDTKVGFGPVTDLSLALSLEEGEGPV
EEEEECEEEECCCCCCCCCCEECEEEEEEECCEEEECCCCCCCCCCEEEEEEEECCCCHH
KSFLYGIGSDIDIPYFSFFSLNLYRRSAISDDNISDGWQASPSFKIEFPVGNSSIVFDGY
HHHHHHCCCCCCCCEEEEEEEEEEHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECE
VDWVFAVDDANYSTGVHVNPQLKYDLGAAIMGEGNKGHLYVGIEYDYWKNKYGVEGIDQN
EEEEEEEECCCCCCCEEECCEEEEECCEEEEECCCCCEEEEEEEEHHCCCCCCCCCCCCC
TYSFIVKYHL
CEEEEEEEEC
>Mature Secondary Structure
MNNKWIFATLLLTPQAFAGDIIHWWDVSLSALYGENYDLAPSEKQTTLTFETAGGWKYGD
CCCCEEEEEEEECCCHHHCCEEEEEECEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCC
WFAFQDFTYFNGSNVGKEQTTYGEITTRFSAGKIFDTKVGFGPVTDLSLALSLEEGEGPV
EEEEECEEEECCCCCCCCCCEECEEEEEEECCEEEECCCCCCCCCCEEEEEEEECCCCHH
KSFLYGIGSDIDIPYFSFFSLNLYRRSAISDDNISDGWQASPSFKIEFPVGNSSIVFDGY
HHHHHHCCCCCCCCEEEEEEEEEEHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECE
VDWVFAVDDANYSTGVHVNPQLKYDLGAAIMGEGNKGHLYVGIEYDYWKNKYGVEGIDQN
EEEEEEEECCCCCCCEEECCEEEEECCEEEEECCCCCEEEEEEEEHHCCCCCCCCCCCCC
TYSFIVKYHL
CEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA