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The map label for this gene is ydhJ [C]

Identifier: 167622542

GI number: 167622542

Start: 724795

End: 726207

Strand: Direct

Name: ydhJ [C]

Synonym: Shal_0602

Alternate gene names: 167622542

Gene position: 724795-726207 (Clockwise)

Preceding gene: 167622541

Following gene: 167622543

Centisome position: 13.87

GC content: 49.89

Gene sequence:

>1413_bases
ATGAAAACGAACAATAAAAAAATGGTACACACAATGATGGTTACTAACGGCACTGAAAAATCTCGCTTATTCGATCTTAA
TGCGATCACTCGCGCCATGAGCTTTGGCTTCTTAATGAGCCTAACTACGGCATTTGTGCTACCTACGCTTGCCACTGCAG
GTGATGGCCATGATCACGGAGCTGAAGAGGTGGTGTTGGTTCAAGTGCAAGGCGATAGTCATGACCATGCAGCAGAAGAG
ACGGCCCATGATGATAGCCACGACCATAATGCCAAAGAAGCGAGTGCCCATGAAGATAGCCATGATCATGATGCCGAAGA
GGTAAAAGCTAAAGATGACGGTCACGGTCATGATGAAGCAGAGAAGAAAGATGATGGTCACGGACACGGCGCAGAAGAAG
CCGAGGAAGATGTTCACGGTATCGAGCTGACGGCTGCGCAGTTAGCCTTGGCAAAGATTGAAGTGGCTCAGCTTAGCGAG
CAGACATTCAGCCTAGAAGATGTAGCGACAGCAACCATAGTGGTAGATAGAGATAGAACCGTCACCATTGCGCCTCAGGT
CGATGTACGAGTGTTGAAAAGAAACGTGGTTCCGGGTCAAGAGGTGAATAAAGGCGACATACTACTCACCCTAGGTGGCG
TTGCAGTTGCTCAGGCGCAAGCCGATTATATCAATGCCGCTGCTGAGTGGAGTCGTGTGAAGCGTATGAGCACCAGTGCT
GTTAGTGCTAGCCGTCGTTTAATGGCGCAAGTGGATGCAGAGCTTAAGCGTGCAACCCTAGAAGCGATGAAGATGACGCC
TGCGCAGATCAAGGCACTGGCTAATGCACCGGAAACTATCGGTAGCTATCAGTTAATTGCACCTATCAGCGGTCGTGTTC
AGCAAGATATCGCACTATTAGGTCAAATCGTACCAGCAGGTACGGCGCTGATGCAGCTAACCGATGAATCACATCTTTGG
GTTGAAGCCGAGTTGACGCCAACTCAAGCTGAGAAAGTCAGCATCGGTAGCAAAACCGTGGTTAAAGTCGGTGACAAGAG
CATGGAAGGCACCATTATCGGCCGTTCACATGAGCTTGATAGCGTGACGCGTACCGAGCAGATCTTAGTGGCGTTTGAAA
ACGCAGGCCATGTGCTACACGCGGGCCAATTTGCTGAATTGTACCTACCGGATGCATCGAAAGGCGGTGTGATCCTACCG
GATTCGGCACTGACTCGTAGCAGCGATGGTCATTGGCAGGTATTTATCGAAGGCGCTGAGGGTTTCGAAGCGTTAGAGAT
TGAAGTGGTTGAGCGCCAGCGAGGCATGAACCTAGTTCGTGGCTTGGAAAAAGATGCTCAGGTTGTTGTATCTGGGGCAT
TTTTCCTTGCCTCTGAACAGGCTAAATCTGGTTTCGATATCCACAACCACTAA

Upstream 100 bases:

>100_bases
TGGATGGGAGCAAGTGGGCAATTGGAAGGCTATCTCAATAGCCAGTTATCGACTCAGGGCGCTGCATCAGCCTCTGTTCA
AGTGAATTAAGGCTTTGATT

Downstream 100 bases:

>100_bases
GAGGCTGCTGCAATGTTACAGAAACTCATAGACGTTGCCATTCGCAATCGTCTGATGGTAGTGCTTACGCTGGTAGGCTT
GATTATTGCCTGCGTAGCCA

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; RND Family Efflux Transporter MFP Subunit; Cation Efflux Protein; Cation Efflux System Protein; Cation Efflux Family Protein; RND Family Transporter Membrane-Fusion Protein; Metal Transporter-Like Exported Protein; Heavy Metal Resistance Protein Czcb; Secretion Protein HlyD Family Protein; Cobalt-Zinc-Cadmium Resistance Protein CzcB; Cation Efflux System; Copper/Silver Efflux System Membrane Fusion Protein; Metal Ion Efflux Membrane Fusion Protein Family

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MKTNNKKMVHTMMVTNGTEKSRLFDLNAITRAMSFGFLMSLTTAFVLPTLATAGDGHDHGAEEVVLVQVQGDSHDHAAEE
TAHDDSHDHNAKEASAHEDSHDHDAEEVKAKDDGHGHDEAEKKDDGHGHGAEEAEEDVHGIELTAAQLALAKIEVAQLSE
QTFSLEDVATATIVVDRDRTVTIAPQVDVRVLKRNVVPGQEVNKGDILLTLGGVAVAQAQADYINAAAEWSRVKRMSTSA
VSASRRLMAQVDAELKRATLEAMKMTPAQIKALANAPETIGSYQLIAPISGRVQQDIALLGQIVPAGTALMQLTDESHLW
VEAELTPTQAEKVSIGSKTVVKVGDKSMEGTIIGRSHELDSVTRTEQILVAFENAGHVLHAGQFAELYLPDASKGGVILP
DSALTRSSDGHWQVFIEGAEGFEALEIEVVERQRGMNLVRGLEKDAQVVVSGAFFLASEQAKSGFDIHNH

Sequences:

>Translated_470_residues
MKTNNKKMVHTMMVTNGTEKSRLFDLNAITRAMSFGFLMSLTTAFVLPTLATAGDGHDHGAEEVVLVQVQGDSHDHAAEE
TAHDDSHDHNAKEASAHEDSHDHDAEEVKAKDDGHGHDEAEKKDDGHGHGAEEAEEDVHGIELTAAQLALAKIEVAQLSE
QTFSLEDVATATIVVDRDRTVTIAPQVDVRVLKRNVVPGQEVNKGDILLTLGGVAVAQAQADYINAAAEWSRVKRMSTSA
VSASRRLMAQVDAELKRATLEAMKMTPAQIKALANAPETIGSYQLIAPISGRVQQDIALLGQIVPAGTALMQLTDESHLW
VEAELTPTQAEKVSIGSKTVVKVGDKSMEGTIIGRSHELDSVTRTEQILVAFENAGHVLHAGQFAELYLPDASKGGVILP
DSALTRSSDGHWQVFIEGAEGFEALEIEVVERQRGMNLVRGLEKDAQVVVSGAFFLASEQAKSGFDIHNH
>Mature_470_residues
MKTNNKKMVHTMMVTNGTEKSRLFDLNAITRAMSFGFLMSLTTAFVLPTLATAGDGHDHGAEEVVLVQVQGDSHDHAAEE
TAHDDSHDHNAKEASAHEDSHDHDAEEVKAKDDGHGHDEAEKKDDGHGHGAEEAEEDVHGIELTAAQLALAKIEVAQLSE
QTFSLEDVATATIVVDRDRTVTIAPQVDVRVLKRNVVPGQEVNKGDILLTLGGVAVAQAQADYINAAAEWSRVKRMSTSA
VSASRRLMAQVDAELKRATLEAMKMTPAQIKALANAPETIGSYQLIAPISGRVQQDIALLGQIVPAGTALMQLTDESHLW
VEAELTPTQAEKVSIGSKTVVKVGDKSMEGTIIGRSHELDSVTRTEQILVAFENAGHVLHAGQFAELYLPDASKGGVILP
DSALTRSSDGHWQVFIEGAEGFEALEIEVVERQRGMNLVRGLEKDAQVVVSGAFFLASEQAKSGFDIHNH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50590; Mature: 50590

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNNKKMVHTMMVTNGTEKSRLFDLNAITRAMSFGFLMSLTTAFVLPTLATAGDGHDHG
CCCCCCEEEEEEEEECCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AEEVVLVQVQGDSHDHAAEETAHDDSHDHNAKEASAHEDSHDHDAEEVKAKDDGHGHDEA
CCCEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC
EKKDDGHGHGAEEAEEDVHGIELTAAQLALAKIEVAQLSEQTFSLEDVATATIVVDRDRT
CCCCCCCCCCCHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEEEECCCE
VTIAPQVDVRVLKRNVVPGQEVNKGDILLTLGGVAVAQAQADYINAAAEWSRVKRMSTSA
EEECCCCCHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VSASRRLMAQVDAELKRATLEAMKMTPAQIKALANAPETIGSYQLIAPISGRVQQDIALL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHCCEEEEECCCCHHHHHHHHH
GQIVPAGTALMQLTDESHLWVEAELTPTQAEKVSIGSKTVVKVGDKSMEGTIIGRSHELD
HHHCCCCCEEEEECCCCCEEEEEECCCCCCCEEECCCCEEEEECCCCCCCEEEECCCCCC
SVTRTEQILVAFENAGHVLHAGQFAELYLPDASKGGVILPDSALTRSSDGHWQVFIEGAE
HHHCCEEEEEEEECCCCEEECCCEEEEECCCCCCCCEECCCHHHCCCCCCCEEEEEECCC
GFEALEIEVVERQRGMNLVRGLEKDAQVVVSGAFFLASEQAKSGFDIHNH
CCEEEEEEEHHHHHCHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MKTNNKKMVHTMMVTNGTEKSRLFDLNAITRAMSFGFLMSLTTAFVLPTLATAGDGHDHG
CCCCCCEEEEEEEEECCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AEEVVLVQVQGDSHDHAAEETAHDDSHDHNAKEASAHEDSHDHDAEEVKAKDDGHGHDEA
CCCEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC
EKKDDGHGHGAEEAEEDVHGIELTAAQLALAKIEVAQLSEQTFSLEDVATATIVVDRDRT
CCCCCCCCCCCHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEEEECCCE
VTIAPQVDVRVLKRNVVPGQEVNKGDILLTLGGVAVAQAQADYINAAAEWSRVKRMSTSA
EEECCCCCHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VSASRRLMAQVDAELKRATLEAMKMTPAQIKALANAPETIGSYQLIAPISGRVQQDIALL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHCCEEEEECCCCHHHHHHHHH
GQIVPAGTALMQLTDESHLWVEAELTPTQAEKVSIGSKTVVKVGDKSMEGTIIGRSHELD
HHHCCCCCEEEEECCCCCEEEEEECCCCCCCEEECCCCEEEEECCCCCCCEEEECCCCCC
SVTRTEQILVAFENAGHVLHAGQFAELYLPDASKGGVILPDSALTRSSDGHWQVFIEGAE
HHHCCEEEEEEEECCCCEEECCCEEEEECCCCCCCCEECCCHHHCCCCCCCEEEEEECCC
GFEALEIEVVERQRGMNLVRGLEKDAQVVVSGAFFLASEQAKSGFDIHNH
CCEEEEEEEHHHHHCHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA