| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167622533
Identifier: 167622533
GI number: 167622533
Start: 719078
End: 719413
Strand: Reverse
Name: 167622533
Synonym: Shal_0593
Alternate gene names: NA
Gene position: 719413-719078 (Counterclockwise)
Preceding gene: 167622534
Following gene: 167622528
Centisome position: 13.76
GC content: 44.64
Gene sequence:
>336_bases ATGCTGGCTTTTTCAGTTTTATGCCTATTTATCGGCTATCACGCCTATCTGTTTATTATGCCCAGTGTAAAAGTCATTAA TCAGTCTGGGCAGCTACTCACTCGAGTCGAAGTCAGCCTGCCGAGCAATAACTTAGTGTTTGATAATATCGGCCCTTCAC AGAGTGCGCGCATTCACCACAGCACAGAACAAGCTGACGGAGACTATGCTTACCGCATCCGTTTATCATCGGGAAAACAT ATCAATGGTCGGTGCGGCTATGTCACTCACGACCAATATATGAAAGTACTGAAACTCACCGTAAACAGAGACGCCAAAGT AAAATGTGTCGAATAG
Upstream 100 bases:
>100_bases AGCTGTCGCGTTTTCTATACTTACAACTTAGCGTTTCTGATGCCGCCTAGAGACTGGCAGTGTTCCTAATCAAGGAGAAT GAATGCGAACTTGCCTACTC
Downstream 100 bases:
>100_bases CCCTTATTCACTGAGCAACGAGCCGATTTGTTGATAACTGCTCTGAGGGTCTTGGTAATCAACTTCGATCACGTAAAACT CACCATTTACTAATAACACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MLAFSVLCLFIGYHAYLFIMPSVKVINQSGQLLTRVEVSLPSNNLVFDNIGPSQSARIHHSTEQADGDYAYRIRLSSGKH INGRCGYVTHDQYMKVLKLTVNRDAKVKCVE
Sequences:
>Translated_111_residues MLAFSVLCLFIGYHAYLFIMPSVKVINQSGQLLTRVEVSLPSNNLVFDNIGPSQSARIHHSTEQADGDYAYRIRLSSGKH INGRCGYVTHDQYMKVLKLTVNRDAKVKCVE >Mature_111_residues MLAFSVLCLFIGYHAYLFIMPSVKVINQSGQLLTRVEVSLPSNNLVFDNIGPSQSARIHHSTEQADGDYAYRIRLSSGKH INGRCGYVTHDQYMKVLKLTVNRDAKVKCVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12489; Mature: 12489
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAFSVLCLFIGYHAYLFIMPSVKVINQSGQLLTRVEVSLPSNNLVFDNIGPSQSARIHH CHHHHHHHHHHHHHEEEEECCCEEEECCCCCEEEEEEEECCCCCEEEECCCCCCCCEEEE STEQADGDYAYRIRLSSGKHINGRCGYVTHDQYMKVLKLTVNRDAKVKCVE CCCCCCCCEEEEEEECCCCEECCEECEEEHHHHHEEEHEECCCCCEEEEEC >Mature Secondary Structure MLAFSVLCLFIGYHAYLFIMPSVKVINQSGQLLTRVEVSLPSNNLVFDNIGPSQSARIHH CHHHHHHHHHHHHHEEEEECCCEEEECCCCCEEEEEEEECCCCCEEEECCCCCCCCEEEE STEQADGDYAYRIRLSSGKHINGRCGYVTHDQYMKVLKLTVNRDAKVKCVE CCCCCCCCEEEEEEECCCCEECCEECEEEHHHHHEEEHEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA