Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622533

Identifier: 167622533

GI number: 167622533

Start: 719078

End: 719413

Strand: Reverse

Name: 167622533

Synonym: Shal_0593

Alternate gene names: NA

Gene position: 719413-719078 (Counterclockwise)

Preceding gene: 167622534

Following gene: 167622528

Centisome position: 13.76

GC content: 44.64

Gene sequence:

>336_bases
ATGCTGGCTTTTTCAGTTTTATGCCTATTTATCGGCTATCACGCCTATCTGTTTATTATGCCCAGTGTAAAAGTCATTAA
TCAGTCTGGGCAGCTACTCACTCGAGTCGAAGTCAGCCTGCCGAGCAATAACTTAGTGTTTGATAATATCGGCCCTTCAC
AGAGTGCGCGCATTCACCACAGCACAGAACAAGCTGACGGAGACTATGCTTACCGCATCCGTTTATCATCGGGAAAACAT
ATCAATGGTCGGTGCGGCTATGTCACTCACGACCAATATATGAAAGTACTGAAACTCACCGTAAACAGAGACGCCAAAGT
AAAATGTGTCGAATAG

Upstream 100 bases:

>100_bases
AGCTGTCGCGTTTTCTATACTTACAACTTAGCGTTTCTGATGCCGCCTAGAGACTGGCAGTGTTCCTAATCAAGGAGAAT
GAATGCGAACTTGCCTACTC

Downstream 100 bases:

>100_bases
CCCTTATTCACTGAGCAACGAGCCGATTTGTTGATAACTGCTCTGAGGGTCTTGGTAATCAACTTCGATCACGTAAAACT
CACCATTTACTAATAACACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MLAFSVLCLFIGYHAYLFIMPSVKVINQSGQLLTRVEVSLPSNNLVFDNIGPSQSARIHHSTEQADGDYAYRIRLSSGKH
INGRCGYVTHDQYMKVLKLTVNRDAKVKCVE

Sequences:

>Translated_111_residues
MLAFSVLCLFIGYHAYLFIMPSVKVINQSGQLLTRVEVSLPSNNLVFDNIGPSQSARIHHSTEQADGDYAYRIRLSSGKH
INGRCGYVTHDQYMKVLKLTVNRDAKVKCVE
>Mature_111_residues
MLAFSVLCLFIGYHAYLFIMPSVKVINQSGQLLTRVEVSLPSNNLVFDNIGPSQSARIHHSTEQADGDYAYRIRLSSGKH
INGRCGYVTHDQYMKVLKLTVNRDAKVKCVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12489; Mature: 12489

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAFSVLCLFIGYHAYLFIMPSVKVINQSGQLLTRVEVSLPSNNLVFDNIGPSQSARIHH
CHHHHHHHHHHHHHEEEEECCCEEEECCCCCEEEEEEEECCCCCEEEECCCCCCCCEEEE
STEQADGDYAYRIRLSSGKHINGRCGYVTHDQYMKVLKLTVNRDAKVKCVE
CCCCCCCCEEEEEEECCCCEECCEECEEEHHHHHEEEHEECCCCCEEEEEC
>Mature Secondary Structure
MLAFSVLCLFIGYHAYLFIMPSVKVINQSGQLLTRVEVSLPSNNLVFDNIGPSQSARIHH
CHHHHHHHHHHHHHEEEEECCCEEEECCCCCEEEEEEEECCCCCEEEECCCCCCCCEEEE
STEQADGDYAYRIRLSSGKHINGRCGYVTHDQYMKVLKLTVNRDAKVKCVE
CCCCCCCCEEEEEEECCCCEECCEECEEEHHHHHEEEHEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA