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The map label for this gene is nosD [H]

Identifier: 167622514

GI number: 167622514

Start: 689476

End: 690795

Strand: Direct

Name: nosD [H]

Synonym: Shal_0574

Alternate gene names: 167622514

Gene position: 689476-690795 (Clockwise)

Preceding gene: 167622513

Following gene: 167622515

Centisome position: 13.19

GC content: 42.35

Gene sequence:

>1320_bases
ATGAACATATCACTGTTAAACGTTGTTAGCCGGGCAAGTAGAGCCGCTATTTTTCGCCTGTTTATATTGGCTGTCACTCT
TGGTTATAGTGCTAATAATTACGCTGAGAACCTGTCAGTGTCTAGTACTGAAGAGTTAAAGCATGCACTAACTCATGCCA
AATCGGGGGATAGAATTATTCTCGATACTGGACGTTATCAAGGCCCACTTCAAATTCATCAGTCGATTATTCTTTCAAGC
CTTGGCGACAGCATCATAGATGCAAATGGTATAGGCAGTGCCATTAAGGTATTTGCGCCAAATGTTGAGATCTCAGGCCT
GAGAATTGAAAACTGGGGCAATGATCATTACGAGCGTGATGCAGGAATTTTAGTTGAGCCTGGAAATCATGGGCTAAGAA
TTCATAATAACTCTCTGACTGGCAATGGTTTTGGTATTCGCGCCGATGAGCTAAACGATATAAAGATCCACAATAACGTG
ATTGTGGGCAATAGCAGCCTATACATCTTAGATAGAGGTGATGGTATCCATCTGCAACATGTTATCGGTGCTGAAATATG
GGGCAATACTATCTCGCAGGTCAGAGATGGGGTTTACCTTGAGTCTGGCAGTAAAAGTAAAGTGTATGCAAATCAACTTT
TCGACCAGCAGTATGGTATCCACTATATGTATACCACCGATGACGAAGCTTTCGATAACCAAAGTTATCAAGTTGATGGT
GGTTATGCACTGATGGACTCGAAACGTATCTACCTGCACCGTAATCAGGTTTGGGATGCGATTGATTTTGGTATCTTGCT
CAATATGACCAAAGACTCGTTGGTGAAGTCTAATCGGGTCGAACAGATTATTAATCGCAGCGAAAACCAAATACAGGGCC
AAGAAGGTAAAGGTATTTTTGTTTACGGCGCCCGAGACAACACCATTATTAATAATCGCTTTGCCAACAATGATATAGGC
TTCTATATGGCCATGGGCGGCGAGGGCAATCAGGTTTATGGTAATCAGTTTATTGATAACTTTTCCCAAGTTAAATATGT
CGGCGATGTCTTGCTGGAGTGGAGTCAAACTGGTCGTGGTAATTACTGGAGTGGATACCTAGGTTGGGGTCACAGTTCCG
ATGATGTAGGCAACACGGCTTACCGTCCTAATGATAATATAGATAAACTGTTTTGGCTTTATCCTGAAGCTAACTTCTTG
ATGGATAGCCCTATTGTTGTAGTACTTCGCTGGGTGCAGAGTCAATTTGAAATAACAGAGCCTAGCGGCATAGTCGATAG
TTTTCCCCTGTTAACGCCTAATCCCGCATTTGACTATTAA

Upstream 100 bases:

>100_bases
ATTAACCTATGAGCAGATCACTATTGAACTACTGGCTGGCGAATAGCTAGAAAAAGCGAGTTGATTTAGGTTTGATGATT
AGTGAAGGTGGTATTAAGCG

Downstream 100 bases:

>100_bases
TAGGCAATGATTAACAAACTGGCAGTAAATATCAGCCATTAGGCGATTTTTTTGCCCTAGAGGCTTGGCTATTGGGCATG
TTCGGAGAATCAATGAATCC

Product: periplasmic copper-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MNISLLNVVSRASRAAIFRLFILAVTLGYSANNYAENLSVSSTEELKHALTHAKSGDRIILDTGRYQGPLQIHQSIILSS
LGDSIIDANGIGSAIKVFAPNVEISGLRIENWGNDHYERDAGILVEPGNHGLRIHNNSLTGNGFGIRADELNDIKIHNNV
IVGNSSLYILDRGDGIHLQHVIGAEIWGNTISQVRDGVYLESGSKSKVYANQLFDQQYGIHYMYTTDDEAFDNQSYQVDG
GYALMDSKRIYLHRNQVWDAIDFGILLNMTKDSLVKSNRVEQIINRSENQIQGQEGKGIFVYGARDNTIINNRFANNDIG
FYMAMGGEGNQVYGNQFIDNFSQVKYVGDVLLEWSQTGRGNYWSGYLGWGHSSDDVGNTAYRPNDNIDKLFWLYPEANFL
MDSPIVVVLRWVQSQFEITEPSGIVDSFPLLTPNPAFDY

Sequences:

>Translated_439_residues
MNISLLNVVSRASRAAIFRLFILAVTLGYSANNYAENLSVSSTEELKHALTHAKSGDRIILDTGRYQGPLQIHQSIILSS
LGDSIIDANGIGSAIKVFAPNVEISGLRIENWGNDHYERDAGILVEPGNHGLRIHNNSLTGNGFGIRADELNDIKIHNNV
IVGNSSLYILDRGDGIHLQHVIGAEIWGNTISQVRDGVYLESGSKSKVYANQLFDQQYGIHYMYTTDDEAFDNQSYQVDG
GYALMDSKRIYLHRNQVWDAIDFGILLNMTKDSLVKSNRVEQIINRSENQIQGQEGKGIFVYGARDNTIINNRFANNDIG
FYMAMGGEGNQVYGNQFIDNFSQVKYVGDVLLEWSQTGRGNYWSGYLGWGHSSDDVGNTAYRPNDNIDKLFWLYPEANFL
MDSPIVVVLRWVQSQFEITEPSGIVDSFPLLTPNPAFDY
>Mature_439_residues
MNISLLNVVSRASRAAIFRLFILAVTLGYSANNYAENLSVSSTEELKHALTHAKSGDRIILDTGRYQGPLQIHQSIILSS
LGDSIIDANGIGSAIKVFAPNVEISGLRIENWGNDHYERDAGILVEPGNHGLRIHNNSLTGNGFGIRADELNDIKIHNNV
IVGNSSLYILDRGDGIHLQHVIGAEIWGNTISQVRDGVYLESGSKSKVYANQLFDQQYGIHYMYTTDDEAFDNQSYQVDG
GYALMDSKRIYLHRNQVWDAIDFGILLNMTKDSLVKSNRVEQIINRSENQIQGQEGKGIFVYGARDNTIINNRFANNDIG
FYMAMGGEGNQVYGNQFIDNFSQVKYVGDVLLEWSQTGRGNYWSGYLGWGHSSDDVGNTAYRPNDNIDKLFWLYPEANFL
MDSPIVVVLRWVQSQFEITEPSGIVDSFPLLTPNPAFDY

Specific function: Involved in copper processing and transport; in the assembly of the copper chromophores of nitrous oxide reductase [H]

COG id: COG3420

COG function: function code P; Nitrous oxidase accessory protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006633
- InterPro:   IPR007742
- InterPro:   IPR022441
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF05048 NosD [H]

EC number: NA

Molecular weight: Translated: 49070; Mature: 49070

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNISLLNVVSRASRAAIFRLFILAVTLGYSANNYAENLSVSSTEELKHALTHAKSGDRII
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCEEE
LDTGRYQGPLQIHQSIILSSLGDSIIDANGIGSAIKVFAPNVEISGLRIENWGNDHYERD
EECCCCCCHHHHHHHHHHHHHCCHHCCCCCCCCEEEEEECCEEEEEEEEECCCCCCCCCC
AGILVEPGNHGLRIHNNSLTGNGFGIRADELNDIKIHNNVIVGNSSLYILDRGDGIHLQH
CCEEECCCCCCEEEECCCCCCCCCEEECCCCCCEEEECEEEECCCEEEEEECCCCEEEEH
VIGAEIWGNTISQVRDGVYLESGSKSKVYANQLFDQQYGIHYMYTTDDEAFDNQSYQVDG
HHHHHHHCCHHHHHHCCEEEECCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCEEECC
GYALMDSKRIYLHRNQVWDAIDFGILLNMTKDSLVKSNRVEQIINRSENQIQGQEGKGIF
CEEEEECCEEEEECCCCCCHHCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE
VYGARDNTIINNRFANNDIGFYMAMGGEGNQVYGNQFIDNFSQVKYVGDVLLEWSQTGRG
EEECCCCEEEECEECCCCCEEEEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCC
NYWSGYLGWGHSSDDVGNTAYRPNDNIDKLFWLYPEANFLMDSPIVVVLRWVQSQFEITE
CEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCHHHHHHHHHHHEEECC
PSGIVDSFPLLTPNPAFDY
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNISLLNVVSRASRAAIFRLFILAVTLGYSANNYAENLSVSSTEELKHALTHAKSGDRII
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCEEE
LDTGRYQGPLQIHQSIILSSLGDSIIDANGIGSAIKVFAPNVEISGLRIENWGNDHYERD
EECCCCCCHHHHHHHHHHHHHCCHHCCCCCCCCEEEEEECCEEEEEEEEECCCCCCCCCC
AGILVEPGNHGLRIHNNSLTGNGFGIRADELNDIKIHNNVIVGNSSLYILDRGDGIHLQH
CCEEECCCCCCEEEECCCCCCCCCEEECCCCCCEEEECEEEECCCEEEEEECCCCEEEEH
VIGAEIWGNTISQVRDGVYLESGSKSKVYANQLFDQQYGIHYMYTTDDEAFDNQSYQVDG
HHHHHHHCCHHHHHHCCEEEECCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCEEECC
GYALMDSKRIYLHRNQVWDAIDFGILLNMTKDSLVKSNRVEQIINRSENQIQGQEGKGIF
CEEEEECCEEEEECCCCCCHHCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE
VYGARDNTIINNRFANNDIGFYMAMGGEGNQVYGNQFIDNFSQVKYVGDVLLEWSQTGRG
EEECCCCEEEECEECCCCCEEEEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCC
NYWSGYLGWGHSSDDVGNTAYRPNDNIDKLFWLYPEANFLMDSPIVVVLRWVQSQFEITE
CEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCHHHHHHHHHHHEEECC
PSGIVDSFPLLTPNPAFDY
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]