Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622463

Identifier: 167622463

GI number: 167622463

Start: 632223

End: 632762

Strand: Reverse

Name: 167622463

Synonym: Shal_0523

Alternate gene names: NA

Gene position: 632762-632223 (Counterclockwise)

Preceding gene: 167622464

Following gene: 167622462

Centisome position: 12.11

GC content: 38.33

Gene sequence:

>540_bases
ATGAAATTATTAACTAAAGAAGTCGATCTGAGCTTCTTATCTGATCATTATGAAAACATTAGATTTCATATGTTTTGTTC
TGATGACCCTCTTTCCTTTATTTCCTGCATAGCGTGTGTATGTGAAACGTCTGCAGAGGTTGTCGAAAGTTGGTCTGAAA
TCCAGAGCATGGTCTCTGTTTACTACCAGCCCTCAGGCAACTTGGCATCATGGAATGTGTACTTGGCCTTGATTACAGTT
GAAAGTGTTCCAATTTGGGAAAAATATCAAATAGAAAATAACAAGTATGCAGCTCGTAAGATCATACTTGATGGGCTCCC
AGAAATACCTTGTATTGACCAGATGGCTATTGAACTACAGAAACAGCTATTGGGCTCAGATTTAGCACTTTATCCCCAAG
TCAACGAGTCAAGAGAGGCTTTGCTGTCTATAGAAGAGTACATTCGTGGTACACCTTTAGATTCAAAAAAAGAGTCCAAA
AATAAGCGCGCCTTGGTGATCGACAACATAATTGAGCTCTTGAACAATAATGAAAATTAA

Upstream 100 bases:

>100_bases
TTGGAAGGGCTTCGAAAGAATTGTGTGATTGATAGCGAGGATGAATATCAAGGCTTGCCTTCAGGTCGCGCGCAATTGCA
GTTGTTTAAGGATAAGCTTA

Downstream 100 bases:

>100_bases
AAAAGTTGAAATCGAGGCATTTCGTGCCTACAAGTCAAAGTCGGACGGAACTTTTGATTTTACGAATCAAGGGGATATAC
CTTCGAACTTTGTCGCAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKLLTKEVDLSFLSDHYENIRFHMFCSDDPLSFISCIACVCETSAEVVESWSEIQSMVSVYYQPSGNLASWNVYLALITV
ESVPIWEKYQIENNKYAARKIILDGLPEIPCIDQMAIELQKQLLGSDLALYPQVNESREALLSIEEYIRGTPLDSKKESK
NKRALVIDNIIELLNNNEN

Sequences:

>Translated_179_residues
MKLLTKEVDLSFLSDHYENIRFHMFCSDDPLSFISCIACVCETSAEVVESWSEIQSMVSVYYQPSGNLASWNVYLALITV
ESVPIWEKYQIENNKYAARKIILDGLPEIPCIDQMAIELQKQLLGSDLALYPQVNESREALLSIEEYIRGTPLDSKKESK
NKRALVIDNIIELLNNNEN
>Mature_179_residues
MKLLTKEVDLSFLSDHYENIRFHMFCSDDPLSFISCIACVCETSAEVVESWSEIQSMVSVYYQPSGNLASWNVYLALITV
ESVPIWEKYQIENNKYAARKIILDGLPEIPCIDQMAIELQKQLLGSDLALYPQVNESREALLSIEEYIRGTPLDSKKESK
NKRALVIDNIIELLNNNEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20456; Mature: 20456

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLTKEVDLSFLSDHYENIRFHMFCSDDPLSFISCIACVCETSAEVVESWSEIQSMVSV
CCCCHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
YYQPSGNLASWNVYLALITVESVPIWEKYQIENNKYAARKIILDGLPEIPCIDQMAIELQ
HCCCCCCEEEEEEEEEEEEECCCCCCCEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHH
KQLLGSDLALYPQVNESREALLSIEEYIRGTPLDSKKESKNKRALVIDNIIELLNNNEN
HHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHCCCCCEEHHHHHHHHHCCCCC
>Mature Secondary Structure
MKLLTKEVDLSFLSDHYENIRFHMFCSDDPLSFISCIACVCETSAEVVESWSEIQSMVSV
CCCCHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
YYQPSGNLASWNVYLALITVESVPIWEKYQIENNKYAARKIILDGLPEIPCIDQMAIELQ
HCCCCCCEEEEEEEEEEEEECCCCCCCEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHH
KQLLGSDLALYPQVNESREALLSIEEYIRGTPLDSKKESKNKRALVIDNIIELLNNNEN
HHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHCCCCCEEHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA