| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167622401
Identifier: 167622401
GI number: 167622401
Start: 541251
End: 541703
Strand: Reverse
Name: 167622401
Synonym: Shal_0461
Alternate gene names: NA
Gene position: 541703-541251 (Counterclockwise)
Preceding gene: 167622404
Following gene: 167622385
Centisome position: 10.36
GC content: 44.15
Gene sequence:
>453_bases ATGAAAAAGCCCCCTCAGGATCTCAGTCAATTACTGCATCAGCAAGGGACTATGCCCAATTTAGCTGAAAAAGCAGAACT GTTATTACACTTAGATCACTACGTGAAACAAGTGCTAACTGGTCCAGTGACAGAGCAACTAAAGGTTGCCAATTTACGCC AAGGGATCTTGGTTATTGAAACAACTACGGCTGCTTGGGCGGCAAGGATTAACTTCCAAAAGCCCAAAATACTGCAATTA CTGCAAGCCGAAACGCTACCCATGCTTACCGCAATCGAGGTTAAAGTCAACCCAAGCTTGTTATTGTATGCAACAAAACC CAAGGTGGTTCACAACCTGATAAGTGAAAATGCCGCCGCTCATATTGAAGCATTAGCTGAACATACTGAAGGGACATTAG CGGTAAAACTAAAACGGCTGGCTGCATTAGCCAGCCGTTCAAGGCAATCTTAA
Upstream 100 bases:
>100_bases ATAGCAACCAACGCTTTCCTGGCTGCCAGCGTGTGGCACCATTTCGACCTTGAATAAAAACTGTTACACTCATAGCCTAA TTAAGCCATTTTATTATCAT
Downstream 100 bases:
>100_bases TTCGCGATTAAGCGAATACAGCACCCGCAGGTACTGAGAAGCTGACGGGTGCGTCGGCTTCTTTTTCAAAGCTCACGATT TCCCAAGCGTCTTGCTGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MKKPPQDLSQLLHQQGTMPNLAEKAELLLHLDHYVKQVLTGPVTEQLKVANLRQGILVIETTTAAWAARINFQKPKILQL LQAETLPMLTAIEVKVNPSLLLYATKPKVVHNLISENAAAHIEALAEHTEGTLAVKLKRLAALASRSRQS
Sequences:
>Translated_150_residues MKKPPQDLSQLLHQQGTMPNLAEKAELLLHLDHYVKQVLTGPVTEQLKVANLRQGILVIETTTAAWAARINFQKPKILQL LQAETLPMLTAIEVKVNPSLLLYATKPKVVHNLISENAAAHIEALAEHTEGTLAVKLKRLAALASRSRQS >Mature_150_residues MKKPPQDLSQLLHQQGTMPNLAEKAELLLHLDHYVKQVLTGPVTEQLKVANLRQGILVIETTTAAWAARINFQKPKILQL LQAETLPMLTAIEVKVNPSLLLYATKPKVVHNLISENAAAHIEALAEHTEGTLAVKLKRLAALASRSRQS
Specific function: Unknown
COG id: COG4701
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16545; Mature: 16545
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKPPQDLSQLLHQQGTMPNLAEKAELLLHLDHYVKQVLTGPVTEQLKVANLRQGILVIE CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEE TTTAAWAARINFQKPKILQLLQAETLPMLTAIEVKVNPSLLLYATKPKVVHNLISENAAA ECCHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEECCCEEEEECCHHHHHHHHHCCHHH HIEALAEHTEGTLAVKLKRLAALASRSRQS HHHHHHHHCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKPPQDLSQLLHQQGTMPNLAEKAELLLHLDHYVKQVLTGPVTEQLKVANLRQGILVIE CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEE TTTAAWAARINFQKPKILQLLQAETLPMLTAIEVKVNPSLLLYATKPKVVHNLISENAAA ECCHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEECCCEEEEECCHHHHHHHHHCCHHH HIEALAEHTEGTLAVKLKRLAALASRSRQS HHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA